[Bug 283261] biology/subread: update 2. 0.2 → 2.0.8

https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=283261

            Bug ID: 283261
           Summary: biology/subread: update 2.0.2 → 2.0.8
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
               URL: https://subread.sourceforge.net/
                OS: Any
            Status: New
          Severity: Affects Some People
          Priority: ---
         Component: Individual Port(s)
          Assignee: jwb@freebsd.org
          Reporter: alster@vinterdalen.se
                CC: jwb@freebsd.org
          Assignee: jwb@freebsd.org
             Flags: maintainer-feedback?(jwb@freebsd.org)
 Attachment #255783 maintainer-approval?(jwb@freebsd.org)
             Flags:
                CC: jwb@freebsd.org

Created attachment 255783
  --> https://bugs.freebsd.org/bugzilla/attachment.cgi?id=255783&action=edit
[PATCH] biology/subread: update 2.0.2 → 2.0.8

Release 2.0.8, 4 November 2024
Fixed a bug in featureCounts that cannot load annotations of very long
chromosomes.

Release 2.0.7, 17 October 2024
Deprecated the '--maxMOp' parameter.
Updated User's Guide.

Release 2.0.6, 10 May 2023
Fixed a bug in featureCounts when counting reads supporting each exon-exon
junction in long-read data.

Release 2.0.5, 17 April 2023
Update the inbuilt gene annotation for mm39.

Release 2.0.4, 27 February 2023
'--fraction' parameter now works with '--largestOverlap' parameter in
featureCounts.
Value provided to '--fracOverlap' parameter in featureCounts is now precisely
applied for read filtering.
'-J' parameter in featureCounts now considers all the reads in the input for
junction counting.

Release 2.0.3, 15 July 2021
Users guide updated

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