[package - main-powerpc64le-default][biology/jalview] Failed for jalview-2.11.2.5 in build
- Go to: [ bottom of page ] [ top of archives ] [ this month ]
Date: Mon, 05 Feb 2024 03:40:48 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/foul2/data/main-powerpc64le-default/pe72d10c28234_s4347ef6050/logs/jalview-2.11.2.5.log
Build URL: https://pkg-status.freebsd.org/foul2/build.html?mastername=main-powerpc64le-default&build=pe72d10c28234_s4347ef6050
Log:
=>> Building biology/jalview
build started at Mon Feb 5 03:35:42 UTC 2024
port directory: /usr/ports/biology/jalview
package name: jalview-2.11.2.5
building for: FreeBSD main-powerpc64le-default-job-13 15.0-CURRENT FreeBSD 15.0-CURRENT 1500008 powerpc
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 2018 Jun 27 2023 /usr/ports/biology/jalview/Makefile
Ports top last git commit: e72d10c282
Ports top unclean checkout: no
Port dir last git commit: 4301fdb656
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.1
Host OSVERSION: 1500000
Jail OSVERSION: 1500008
Job Id: 13
!!! Jail is newer than host. (Jail: 1500008, Host: 1500000) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
---Begin Environment---
SHELL=/bin/sh
OSVERSION=1500008
UNAME_v=FreeBSD 15.0-CURRENT 1500008
UNAME_r=15.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
MAKE_OBJDIR_CHECK_WRITABLE=0
LOCALBASE=/usr/local
USER=root
POUDRIERE_NAME=poudriere-git
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.4.1
MASTERMNT=/usr/local/poudriere/data/.m/main-powerpc64le-default/ref
LC_COLLATE=C
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
OUTPUT_REDIRECTED_STDERR=4
OUTPUT_REDIRECTED=1
PWD=/usr/local/poudriere/data/.m/main-powerpc64le-default/13/.p
OUTPUT_REDIRECTED_STDOUT=3
P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS
MASTERNAME=main-powerpc64le-default
SCRIPTPREFIX=/usr/local/share/poudriere
SCRIPTNAME=bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/main-powerpc64le-default/ref/.p/pool
POUDRIERE_PKGNAME=poudriere-git-3.4.1
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
MAKE_ARGS=
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/jalview/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/jalview/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/jalview/work/.cache HOME=/wrkdirs/usr/ports/biology/jalview/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/jalview/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/jalview/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8
--End CONFIGURE_ENV--
--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/jalview/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/jalview/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/jalview/work/.cache HOME=/wrkdirs/usr/ports/biology/jalview/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/jalview/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/jalview/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES LANG=en_US.UTF-8 LC_ALL=en_US.UTF-8 PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTAL
L_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/jalview" EXAMPLESDIR="share/examples/jalview" DATADIR="share/java/jalview" WWWDIR="www/jalview" ETCDIR="etc/jalview"
--End PLIST_SUB--
--SUB_LIST--
JAVA=/usr/local/openjdk11/bin/java JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" JAVA_VERSION="11" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/java/jalview DOCSDIR=/usr/local/share/doc/jalview EXAMPLESDIR=/usr/local/share/examples/jalview WWWDIR=/usr/local/www/jalview ETCDIR=/usr/local/etc/jalview
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 33554432
stack size (kbytes, -s) 524288
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> jalview-2.11.2.5 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.20.9_1.pkg
[main-powerpc64le-default-job-13] Installing pkg-1.20.9_1...
[main-powerpc64le-default-job-13] Extracting pkg-1.20.9_1: .......... done
===> jalview-2.11.2.5 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of jalview-2.11.2.5
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by jalview-2.11.2.5 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by jalview-2.11.2.5 for building
=> SHA256 Checksum OK for jalview_2_11_2_5.tar.gz.
=> SHA256 Checksum OK for jalview-2.11.2.5-deps.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by jalview-2.11.2.5 for building
===> Extracting for jalview-2.11.2.5
=> SHA256 Checksum OK for jalview_2_11_2_5.tar.gz.
=> SHA256 Checksum OK for jalview-2.11.2.5-deps.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for jalview-2.11.2.5
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> jalview-2.11.2.5 depends on executable: gradle761 - not found
===> Installing existing package /packages/All/gradle761-7.6.1.pkg
[main-powerpc64le-default-job-13] Installing gradle761-7.6.1...
[main-powerpc64le-default-job-13] `-- Installing openjdk8-8.392.08.1_1...
[main-powerpc64le-default-job-13] | `-- Installing alsa-lib-1.2.10...
[main-powerpc64le-default-job-13] | `-- Extracting alsa-lib-1.2.10: .......... done
[main-powerpc64le-default-job-13] | `-- Installing dejavu-2.37_3...
[main-powerpc64le-default-job-13] | | `-- Installing fontconfig-2.15.0_2,1...
[main-powerpc64le-default-job-13] | | `-- Installing expat-2.5.0_1...
[main-powerpc64le-default-job-13] | | `-- Extracting expat-2.5.0_1: .......... done
[main-powerpc64le-default-job-13] | | `-- Installing freetype2-2.13.2...
[main-powerpc64le-default-job-13] | | | `-- Installing brotli-1.1.0,1...
[main-powerpc64le-default-job-13] | | | `-- Extracting brotli-1.1.0,1: .......... done
[main-powerpc64le-default-job-13] | | | `-- Installing png-1.6.40...
[main-powerpc64le-default-job-13] | | | `-- Extracting png-1.6.40: .......... done
<snip>
(/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed).
=====
Message from dejavu-2.37_3:
--
Make sure that the freetype module is loaded. If it is not, add the following
line to the "Modules" section of your X Windows configuration file:
Load "freetype"
Add the following line to the "Files" section of X Windows configuration file:
FontPath "/usr/local/share/fonts/dejavu/"
Note: your X Windows configuration file is typically /etc/X11/XF86Config
if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
=====
Message from libinotify-20211018_1:
--
You might want to consider increasing the kern.maxfiles tunable if you plan
to use this library for applications that need to monitor activity of a lot
of files.
=====
Message from openjdk8-8.392.08.1_1:
--
This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and
procfs(5) mounted on /proc.
If you have not done it yet, please do the following:
mount -t fdescfs fdesc /dev/fd
mount -t procfs proc /proc
To make it permanent, you need the following lines in /etc/fstab:
fdesc /dev/fd fdescfs rw 0 0
proc /proc procfs rw 0 0
===> jalview-2.11.2.5 depends on executable: gradle761 - found
===> Returning to build of jalview-2.11.2.5
===> jalview-2.11.2.5 depends on file: /usr/local/openjdk11/bin/java - not found
===> Installing existing package /packages/All/openjdk11-11.0.21+9.1.pkg
[main-powerpc64le-default-job-13] Installing openjdk11-11.0.21+9.1...
[main-powerpc64le-default-job-13] `-- Installing jpeg-turbo-3.0.1_1...
[main-powerpc64le-default-job-13] `-- Extracting jpeg-turbo-3.0.1_1: .......... done
[main-powerpc64le-default-job-13] `-- Installing lcms2-2.16_1...
[main-powerpc64le-default-job-13] | `-- Installing tiff-4.4.0_3...
[main-powerpc64le-default-job-13] | | `-- Installing jbigkit-2.1_2...
[main-powerpc64le-default-job-13] | | `-- Extracting jbigkit-2.1_2: .......... done
[main-powerpc64le-default-job-13] | | `-- Installing libdeflate-1.19...
[main-powerpc64le-default-job-13] | | `-- Extracting libdeflate-1.19: .......... done
[main-powerpc64le-default-job-13] | | `-- Installing zstd-1.5.5_1...
[main-powerpc64le-default-job-13] | | `-- Installing liblz4-1.9.4_1,1...
[main-powerpc64le-default-job-13] | | `-- Extracting liblz4-1.9.4_1,1: .......... done
[main-powerpc64le-default-job-13] | | `-- Extracting zstd-1.5.5_1: .......... done
[main-powerpc64le-default-job-13] | `-- Extracting tiff-4.4.0_3: .......... done
[main-powerpc64le-default-job-13] `-- Extracting lcms2-2.16_1: .......... done
[main-powerpc64le-default-job-13] `-- Installing libXrandr-1.5.2_1...
[main-powerpc64le-default-job-13] `-- Extracting libXrandr-1.5.2_1: .......... done
[main-powerpc64le-default-job-13] `-- Installing xorg-fonts-truetype-7.7_1...
[main-powerpc64le-default-job-13] | `-- Installing encodings-1.0.5,1...
[main-powerpc64le-default-job-13] | `-- Extracting encodings-1.0.5,1: .......... done
[main-powerpc64le-default-job-13] | `-- Installing font-bh-ttf-1.0.3_5...
[main-powerpc64le-default-job-13] | `-- Extracting font-bh-ttf-1.0.3_5: .......... done
[main-powerpc64le-default-job-13] | `-- Installing font-misc-ethiopic-1.0.4...
[main-powerpc64le-default-job-13] | `-- Extracting font-misc-ethiopic-1.0.4: ...... done
[main-powerpc64le-default-job-13] | `-- Installing font-misc-meltho-1.0.3_5...
[main-powerpc64le-default-job-13] | `-- Extracting font-misc-meltho-1.0.3_5: .......... done
[main-powerpc64le-default-job-13] `-- Extracting xorg-fonts-truetype-7.7_1: ... done
[main-powerpc64le-default-job-13] Extracting openjdk11-11.0.21+9.1: .......... done
==> Running trigger: fontconfig.ucl
Running fc-cache to build fontconfig cache...
=====
Message from openjdk11-11.0.21+9.1:
--
This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and
procfs(5) mounted on /proc.
If you have not done it yet, please do the following:
mount -t fdescfs fdesc /dev/fd
mount -t procfs proc /proc
To make it permanent, you need the following lines in /etc/fstab:
fdesc /dev/fd fdescfs rw 0 0
proc /proc procfs rw 0 0
===> jalview-2.11.2.5 depends on file: /usr/local/openjdk11/bin/java - found
===> Returning to build of jalview-2.11.2.5
===========================================================================
=======================<phase: lib-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: configure >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Configuring for jalview-2.11.2.5
===========================================================================
=======================<phase: build >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Building for jalview-2.11.2.5
Welcome to Gradle 7.6.1!
Here are the highlights of this release:
- Added support for Java 19.
- Introduced `--rerun` flag for individual task rerun.
- Improved dependency block for test suites to be strongly typed.
- Added a pluggable system for Java toolchains provisioning.
For more details see https://docs.gradle.org/7.6.1/release-notes.html
Starting a Gradle Daemon (subsequent builds will be faster)
> Configure project :
Using properties from file './utils/channels/default/channel_gradle.properties'
JALVIEW_VERSION is set to '2.11.2.5'
HEADLESS BUILD
J2S ENABLED
Not in a git repository. Using git values from RELEASE properties file.
Using a LOCAL profile.
> Task :copyHelp
> Task :buildIndices
> Task :copyResources
> Task :copyChannelResources
> Task :createBuildProperties
Execution optimizations have been disabled for task ':createBuildProperties' to ensure correctness due to the following reasons:
- Gradle detected a problem with the following location: '/wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/resources_build'. Reason: Task ':createBuildProperties' uses this output of task ':copyChannelResources' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.6.1/userguide/validation_problems.html#implicit_dependency for more details about this problem.
> Task :buildResources
> Task :copyDocs
> Task :convertMdFiles
Creating /wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/doc_build/doc/README-DMG_creation.html
Creating /wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/doc_build/doc/README-DMG_background_image_creation.html
Creating /wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/doc_build/doc/building.html
Creating /wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/doc_build/doc/releaseprocess.html
> Task :releasesTemplates
Execution optimizations have been disabled for task ':releasesTemplates' to ensure correctness due to the following reasons:
- Gradle detected a problem with the following location: '/wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/help_build/help/html/releases.html'. Reason: Task ':buildIndices' uses this output of task ':releasesTemplates' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.6.1/userguide/validation_problems.html#implicit_dependency for more details about this problem.
- Gradle detected a problem with the following location: '/wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/help_build/help/html/whatsNew.html'. Reason: Task ':buildIndices' uses this output of task ':releasesTemplates' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.6.1/userguide/validation_problems.html#implicit_dependency for more details about this problem.
> Task :prepare
> Task :compileJava
Setting target compatibility to 11
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
The message received from the daemon indicates that the daemon has disappeared.
Build request sent: Build{id=fcd8c456-c436-42bb-8891-efa910c4c46e, currentDir=/wrkdirs/usr/ports/biology/jalview/work/jalview}
Attempting to read last messages from the daemon log...
Daemon pid: 13187
log file: /wrkdirs/usr/ports/biology/jalview/work/gradle-jalview/daemon/7.6.1/daemon-13187.out.log
----- Last 20 lines from daemon log file - daemon-13187.out.log -----
Using properties from file './utils/channels/default/channel_gradle.properties'
JALVIEW_VERSION is set to '2.11.2.5'
HEADLESS BUILD
J2S ENABLED
Not in a git repository. Using git values from RELEASE properties file.
Using a LOCAL profile.
Execution optimizations have been disabled for task ':createBuildProperties' to ensure correctness due to the following reasons:
- Gradle detected a problem with the following location: '/wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/resources_build'. Reason: Task ':createBuildProperties' uses this output of task ':copyChannelResources' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.6.1/userguide/validation_problems.html#implicit_dependency for more details about this problem.
Creating /wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/doc_build/doc/README-DMG_creation.html
Creating /wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/doc_build/doc/README-DMG_background_image_creation.html
Creating /wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/doc_build/doc/building.html
Creating /wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/doc_build/doc/releaseprocess.html
Execution optimizations have been disabled for task ':releasesTemplates' to ensure correctness due to the following reasons:
- Gradle detected a problem with the following location: '/wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/help_build/help/html/releases.html'. Reason: Task ':buildIndices' uses this output of task ':releasesTemplates' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.6.1/userguide/validation_problems.html#implicit_dependency for more details about this problem.
- Gradle detected a problem with the following location: '/wrkdirs/usr/ports/biology/jalview/work/jalview/build/resources/help_build/help/html/whatsNew.html'. Reason: Task ':buildIndices' uses this output of task ':releasesTemplates' without declaring an explicit or implicit dependency. This can lead to incorrect results being produced, depending on what order the tasks are executed. Please refer to https://docs.gradle.org/7.6.1/userguide/validation_problems.html#implicit_dependency for more details about this problem.
Setting target compatibility to 11
Note: Some input files use or override a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: Some input files use unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
----- End of the daemon log -----
JVM crash log found: file:///wrkdirs/usr/ports/biology/jalview/work/gradle-jalview/daemon/7.6.1/hs_err_pid13187.log
FAILURE: Build failed with an exception.
* What went wrong:
Gradle build daemon disappeared unexpectedly (it may have been killed or may have crashed)
* Try:
> Run with --stacktrace option to get the stack trace.
> Run with --info or --debug option to get more log output.
> Run with --scan to get full insights.
* Get more help at https://help.gradle.org
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/jalview