[package - 140releng-powerpc64le-quarterly][biology/cytoscape] Failed for cytoscape-3.6.1 in build/runaway

From: <pkg-fallout_at_FreeBSD.org>
Date: Tue, 26 Dec 2023 19:35:06 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        https://pkg-status.freebsd.org/foul2/data/140releng-powerpc64le-quarterly/74b68b434d29/logs/cytoscape-3.6.1.log
Build URL:      https://pkg-status.freebsd.org/foul2/build.html?mastername=140releng-powerpc64le-quarterly&build=74b68b434d29
Log:

=>> Building biology/cytoscape
build started at Tue Dec 26 17:21:21 UTC 2023
port directory: /usr/ports/biology/cytoscape
package name: cytoscape-3.6.1
building for: FreeBSD 140releng-powerpc64le-quarterly-job-06 14.0-RC3 FreeBSD 14.0-RC3 1400097 powerpc
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r--  1 root wheel 2461 Oct  3 01:04 /usr/ports/biology/cytoscape/Makefile
Ports top last git commit: 74b68b434
Ports top unclean checkout: no
Port dir last git commit: 2195304f9
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.0
Host OSVERSION: 1500000
Jail OSVERSION: 1400097
Job Id: 06

---Begin Environment---
SHELL=/bin/sh
OSVERSION=1400097
UNAME_v=FreeBSD 14.0-RC3 1400097
UNAME_r=14.0-RC3
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
MAKE_OBJDIR_CHECK_WRITABLE=0
LOCALBASE=/usr/local
USER=root
POUDRIERE_NAME=poudriere-git
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.4.0
MASTERMNT=/usr/local/poudriere/data/.m/140releng-powerpc64le-quarterly/ref
LC_COLLATE=C
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
OUTPUT_REDIRECTED_STDERR=4
OUTPUT_REDIRECTED=1
PWD=/usr/local/poudriere/data/.m/140releng-powerpc64le-quarterly/06/.p
OUTPUT_REDIRECTED_STDOUT=3
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=140releng-powerpc64le-quarterly
SCRIPTPREFIX=/usr/local/share/poudriere
SCRIPTNAME=bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/140releng-powerpc64le-quarterly/ref/.p/pool
POUDRIERE_PKGNAME=poudriere-git-3.4.0
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---

---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/cytoscape/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/cytoscape/work  XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/cytoscape/work/.cache  HOME=/wrkdirs/usr/ports/biology/cytoscape/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/cytoscape/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/cytoscape/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/cytoscape/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/cytoscape/work  XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/cytoscape/work/.cache  HOME=/wrkdirs/usr/ports/biology/cytoscape/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/cytoscape/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/cytoscape/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing  "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTAL
 L_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
JAVASHAREDIR="share/java"  JAVAJARDIR="share/java/classes" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/cytoscape"  EXAMPLESDIR="share/examples/cytoscape"  DATADIR="share/cytoscape"  WWWDIR="www/cytoscape"  ETCDIR="etc/cytoscape"
--End PLIST_SUB--

--SUB_LIST--
JAVASHAREDIR="/usr/local/share/java"  JAVAJARDIR="/usr/local/share/java/classes"  JAVALIBDIR="/usr/local/share/java/classes" PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/cytoscape DOCSDIR=/usr/local/share/doc/cytoscape EXAMPLESDIR=/usr/local/share/examples/cytoscape  WWWDIR=/usr/local/www/cytoscape ETCDIR=/usr/local/etc/cytoscape
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
####  ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  8192
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License LGPL21 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===>   cytoscape-3.6.1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.20.9.pkg
[140releng-powerpc64le-quarterly-job-06] Installing pkg-1.20.9...
[140releng-powerpc64le-quarterly-job-06] Extracting pkg-1.20.9: .......... done
===>   cytoscape-3.6.1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of cytoscape-3.6.1
===========================================================================
=======================<phase: fetch-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch          >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License LGPL21 accepted by the user
===> Fetching all distfiles required by cytoscape-3.6.1 for building
===========================================================================
=======================<phase: checksum       >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License LGPL21 accepted by the user
===> Fetching all distfiles required by cytoscape-3.6.1 for building
=> SHA256 Checksum OK for FreeBSD-cytoscape-3.6.1-maven-repository.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-parent-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-api-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-impl-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-support-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-gui-distribution-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-app-template-3.6.1_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract        >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License LGPL21 accepted by the user
===> Fetching all distfiles required by cytoscape-3.6.1 for building
===>  Extracting for cytoscape-3.6.1
=> SHA256 Checksum OK for FreeBSD-cytoscape-3.6.1-maven-repository.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-parent-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-api-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-impl-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-support-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-gui-distribution-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-app-template-3.6.1_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch          >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  Patching for cytoscape-3.6.1
===========================================================================
=======================<phase: build-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===>   cytoscape-3.6.1 depends on package: maven363>0 - not found
===>   Installing existing package /packages/All/maven363-3.6.3.pkg
[140releng-powerpc64le-quarterly-job-06] Installing maven363-3.6.3...
[140releng-powerpc64le-quarterly-job-06] `-- Installing maven-wrapper-2...
[140releng-powerpc64le-quarterly-job-06] `-- Extracting maven-wrapper-2: ... done
[140releng-powerpc64le-quarterly-job-06] `-- Installing openjdk8-8.382.05.1...
[140releng-powerpc64le-quarterly-job-06] |   `-- Installing alsa-lib-1.2.2_1...
[140releng-powerpc64le-quarterly-job-06] |   `-- Extracting alsa-lib-1.2.2_1: .......... done
[140releng-powerpc64le-quarterly-job-06] |   `-- Installing dejavu-2.37_3...
[140releng-powerpc64le-quarterly-job-06] |   | `-- Installing fontconfig-2.14.2,1...
[140releng-powerpc64le-quarterly-job-06] |   |   `-- Installing expat-2.5.0...
[140releng-powerpc64le-quarterly-job-06] |   |   `-- Extracting expat-2.5.0: .......... done
[140releng-powerpc64le-quarterly-job-06] |   |   `-- Installing freetype2-2.13.1...
<snip>
[INFO] File [/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/src/main/resources/xsd/cytables.xsd] was changed since the last build.
[INFO] File [/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/pom.xml] was changed since the last build.
[INFO] Checking up-to-date depends [[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/src/main/resources/xsd/cytables.xsd, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/pom.xml]].
[INFO] Checking up-to-date produces [[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/target/generated-sources/xjc/cytables/META-INF/sun-jaxb.episode, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/target/generated-sources/xjc/cytables/org/cytoscape/io/internal/util/cytables/model/VirtualColumn.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/target/generated-sources/xjc/cytables/org/cytoscape/io/internal/util/cytables/model/ObjectFactory.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/target/generated-sources/xjc/cytables/org/cytoscape/io/internal/util/cytables/model/VirtualColumns.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/io-impl/impl/target/generated-sources/xjc/cytables/org/cytoscape/io/internal/util/cytables/model/CyTables.java]].
[INFO] Depends timestamp [1,522,256,111,000], produces timestamp [1,703,611,414,325].
[INFO] Skipped XJC execution. Generated sources were up-to-date.
[INFO] 
[INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
[INFO] Forking Cytoscape Swing Application Impl (swing-application-impl) 3.6.1
[INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
[INFO] 
[INFO] --- maven-jaxb2-plugin:0.8.1:generate (sessionState) @ swing-application-impl ---
[INFO] Started execution.
[INFO] JAXB API is loaded from the [jar:file:/usr/local/openjdk8/jre/lib/rt.jar!].
[INFO] Detected JAXB API version [2.2].
[INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.8.1:, org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-core:jar:0.8.1:compile, com.sun.org.apache.xml.internal:resolver:jar:20050927:compile, org.apache.maven:maven-plugin-api:jar:2.0.6:compile, org.sonatype.plexus:plexus-build-api:jar:0.0.7:compile, org.apache.maven:maven-project:jar:2.0.6:compile, org.apache.maven:maven-settings:jar:2.0.6:compile, org.apache.maven:maven-profile:jar:2.0.6:compile, org.apache.maven:maven-model:jar:2.0.6:compile, org.apache.maven:maven-artifact-manager:jar:2.0.6:compile, org.apache.maven:maven-repository-metadata:jar:2.0.6:compile, org.apache.maven:maven-plugin-registry:jar:2.0.6:compile, org.apache.maven:maven-artifact:jar:2.0.6:compile, org.codehaus.plexus:plexus-container-default:jar:1.0-alpha-9-stable-1:compile, junit:junit:jar:4.8.1:compile, classworlds:classworlds:jar:1.1-alpha-2:compile, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:compile, org.codehaus.
 plexus:plexus-utils:jar:1.5.15:compile, org.jvnet.jaxb2.maven2:maven-jaxb22-plugin:jar:0.8.1:compile, com.sun.xml.bind:jaxb-impl:jar:2.2.5-b10:compile, com.sun.xml.bind:jaxb-xjc:jar:2.2.5-b10:compile]
[INFO] specVersion:2.1
[INFO] encoding:UTF-8
[INFO] schemaLanguage:null
[INFO] schemaDirectory:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd
[INFO] schemaIncludes:[sessionState.xsd]
[INFO] schemaExcludes:null
[INFO] schemas:[]
[INFO] bindingDirectory:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd
[INFO] bindingIncludes:[*.xjb]
[INFO] bindingExcludes:null
[INFO] bindings:[]
[INFO] disableDefaultExcludes:false
[INFO] catalog:null
[INFO] catalogResolver:null
[INFO] generatePackage:org.cytoscape.internal.io.sessionstate
[INFO] generateDirectory:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState
[INFO] readOnly:false
[INFO] extension:false
[INFO] strict:true
[INFO] writeCode:true
[INFO] verbose:true
[INFO] debug:false
[INFO] args:[]
[INFO] forceRegenerate:false
[INFO] removeOldOutput:false
[INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties]
[INFO] otherDepends:null
[INFO] episodeFile:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/META-INF/sun-jaxb.episode
[INFO] episode:true
[INFO] classpathElements:[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/classes]
[INFO] plugins:null
[INFO] episodes:null
[INFO] useDependenciesAsEpisodes:false
[INFO] xjcPlugins:null
[INFO] episodes:null
[INFO] schemaFiles (calculated):[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd/sessionState.xsd]
[INFO] bindingFiles (calculated):[]
[INFO] xjcPluginArtifacts (resolved):[]
[INFO] xjcPluginFiles (resolved):[]
[INFO] xjcPluginURLs (resolved):[]
[INFO] episodeArtifacts (resolved):[]
[INFO] episodeFiles (resolved):[]
[INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1
 generateDirectory=/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState
 generatePackage=org.cytoscape.internal.io.sessionstate
 schemaLanguage=null
 schemas=[file:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd/sessionState.xsd]
 bindings=[]
 plugins=[]
 catalogs=[]
 catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@25fcc928
 readOnly=false
 extension=false
 strict=true
 verbose=true
 debugMode=false
 arguments=[-episode, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/META-INF/sun-jaxb.episode]]
Using java.util.ServiceLoader
[INFO] File [/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd/sessionState.xsd] was changed since the last build.
[INFO] File [/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/pom.xml] was changed since the last build.
[INFO] Checking up-to-date depends [[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd/sessionState.xsd, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/pom.xml]].
[INFO] Checking up-to-date produces [[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/META-INF/sun-jaxb.episode, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/org/cytoscape/internal/io/sessionstate/NetworkFrame.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/org/cytoscape/internal/io/sessionstate/ObjectFactory.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/org/cytoscape/internal/io/sessionstate/Cytopanel.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/org/cytoscape/internal/io/sessionstate/Cytopanels.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6
 .1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/org/cytoscape/internal/io/sessionstate/SessionState.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/sessionState/org/cytoscape/internal/io/sessionstate/NetworkFrames.java]].
[INFO] Depends timestamp [1,522,256,111,000], produces timestamp [1,703,611,415,118].
[INFO] Skipped XJC execution. Generated sources were up-to-date.
[INFO] 
[INFO] --- maven-jaxb2-plugin:0.8.1:generate (networkList) @ swing-application-impl ---
[INFO] Started execution.
[INFO] JAXB API is loaded from the [jar:file:/usr/local/openjdk8/jre/lib/rt.jar!].
[INFO] Detected JAXB API version [2.2].
[INFO] pluginArtifacts:[org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.8.1:, org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-core:jar:0.8.1:compile, com.sun.org.apache.xml.internal:resolver:jar:20050927:compile, org.apache.maven:maven-plugin-api:jar:2.0.6:compile, org.sonatype.plexus:plexus-build-api:jar:0.0.7:compile, org.apache.maven:maven-project:jar:2.0.6:compile, org.apache.maven:maven-settings:jar:2.0.6:compile, org.apache.maven:maven-profile:jar:2.0.6:compile, org.apache.maven:maven-model:jar:2.0.6:compile, org.apache.maven:maven-artifact-manager:jar:2.0.6:compile, org.apache.maven:maven-repository-metadata:jar:2.0.6:compile, org.apache.maven:maven-plugin-registry:jar:2.0.6:compile, org.apache.maven:maven-artifact:jar:2.0.6:compile, org.codehaus.plexus:plexus-container-default:jar:1.0-alpha-9-stable-1:compile, junit:junit:jar:4.8.1:compile, classworlds:classworlds:jar:1.1-alpha-2:compile, org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1:compile, org.codehaus.
 plexus:plexus-utils:jar:1.5.15:compile, org.jvnet.jaxb2.maven2:maven-jaxb22-plugin:jar:0.8.1:compile, com.sun.xml.bind:jaxb-impl:jar:2.2.5-b10:compile, com.sun.xml.bind:jaxb-xjc:jar:2.2.5-b10:compile]
[INFO] specVersion:2.1
[INFO] encoding:UTF-8
[INFO] schemaLanguage:null
[INFO] schemaDirectory:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd
[INFO] schemaIncludes:[networkList.xsd]
[INFO] schemaExcludes:null
[INFO] schemas:[]
[INFO] bindingDirectory:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd
[INFO] bindingIncludes:[*.xjb]
[INFO] bindingExcludes:null
[INFO] bindings:[]
[INFO] disableDefaultExcludes:false
[INFO] catalog:null
[INFO] catalogResolver:null
[INFO] generatePackage:org.cytoscape.internal.io.networklist
[INFO] generateDirectory:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/networkList
[INFO] readOnly:false
[INFO] extension:false
[INFO] strict:true
[INFO] writeCode:true
[INFO] verbose:true
[INFO] debug:false
[INFO] args:[]
[INFO] forceRegenerate:false
[INFO] removeOldOutput:false
[INFO] produces:[**/*.*, **/*.java, **/bgm.ser, **/jaxb.properties]
[INFO] otherDepends:null
[INFO] episodeFile:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/networkList/META-INF/sun-jaxb.episode
[INFO] episode:true
[INFO] classpathElements:[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/classes]
[INFO] plugins:null
[INFO] episodes:null
[INFO] useDependenciesAsEpisodes:false
[INFO] xjcPlugins:null
[INFO] episodes:null
[INFO] schemaFiles (calculated):[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd/networkList.xsd]
[INFO] bindingFiles (calculated):[]
[INFO] xjcPluginArtifacts (resolved):[]
[INFO] xjcPluginFiles (resolved):[]
[INFO] xjcPluginURLs (resolved):[]
[INFO] episodeArtifacts (resolved):[]
[INFO] episodeFiles (resolved):[]
[INFO] optionsConfiguration:OptionsConfiguration [specVersion=2.1
 generateDirectory=/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/networkList
 generatePackage=org.cytoscape.internal.io.networklist
 schemaLanguage=null
 schemas=[file:/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd/networkList.xsd]
 bindings=[]
 plugins=[]
 catalogs=[]
 catalogResolver=org.jvnet.jaxb2.maven2.resolver.tools.MavenCatalogResolver@182a8bf8
 readOnly=false
 extension=false
 strict=true
 verbose=true
 debugMode=false
 arguments=[-episode, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/networkList/META-INF/sun-jaxb.episode]]
Using java.util.ServiceLoader
[INFO] File [/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd/networkList.xsd] was changed since the last build.
[INFO] File [/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/pom.xml] was changed since the last build.
[INFO] Checking up-to-date depends [[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/src/main/resources/xsd/networkList.xsd, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/pom.xml]].
[INFO] Checking up-to-date produces [[/wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/networkList/META-INF/sun-jaxb.episode, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/networkList/org/cytoscape/internal/io/networklist/ObjectFactory.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/networkList/org/cytoscape/internal/io/networklist/NetworkList.java, /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/impl/swing-application-impl/target/generated-sources/xjc/networkList/org/cytoscape/internal/io/networklist/Network.java]].
[INFO] Depends timestamp [1,522,256,111,000], produces timestamp [1,703,611,415,827].
[INFO] Skipped XJC execution. Generated sources were up-to-date.
[INFO] 
[INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
[INFO] Forking Cytoscape Feature Repository 3.6.1
[INFO] >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>
[INFO] 
[INFO] --- maven-resources-plugin:2.6:copy-resources (copy-resources) @ features ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] Copying 1 resource
[INFO] 
[INFO] <<< maven-source-plugin:2.4:aggregate (aggregate-source) < generate-sources @ io-api <<<
[INFO] 
[INFO] 
[INFO] --- maven-source-plugin:2.4:aggregate (aggregate-source) @ io-api ---
[INFO] 
[INFO] --- maven-jar-plugin:2.6:test-jar (default) @ io-api ---
[INFO] Skipping packaging of the test-jar
[INFO] 
[INFO] --- maven-install-plugin:2.5.2:install (default-install) @ io-api ---
[INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/api/io-api/target/io-api-3.6.1.jar to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/io-api/3.6.1/io-api-3.6.1.jar
[INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/api/io-api/pom.xml to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/io-api/3.6.1/io-api-3.6.1.pom
[INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/api/io-api/target/io-api-3.6.1-sources.jar to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/io-api/3.6.1/io-api-3.6.1-sources.jar
[INFO] 
[INFO] --- maven-bundle-plugin:3.0.0:install (default-install) @ io-api ---
[INFO] Installing org/cytoscape/io-api/3.6.1/io-api-3.6.1.jar
[INFO] Writing OBR metadata
[INFO] 
[INFO] --------------------< org.cytoscape:core-task-api >---------------------
[INFO] Building Cytoscape Core Task API (core-task-api) 3.6.1          [17/117]
[INFO] -------------------------------[ bundle ]-------------------------------
[INFO] 
[INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ core-task-api ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/api/core-task-api/src/main/resources
[INFO] Copying 0 resource
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ core-task-api ---
[INFO] Changes detected - recompiling the module!
[INFO] Compiling 106 source files to /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/api/core-task-api/target/classes
[INFO] 
[INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ core-task-api ---
[INFO] Not copying test resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:testCompile (default-testCompile) @ core-task-api ---
[INFO] Not compiling test sources
[INFO] 
[INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ core-task-api ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- maven-bundle-plugin:3.0.0:bundle (default-bundle) @ core-task-api ---
=>> Killing runaway build after 7200 seconds with no output