git: 269134561d20 - main - science/afni: update to 23.2.05

From: Fernando Apesteguía <fernape_at_FreeBSD.org>
Date: Sat, 19 Aug 2023 11:18:23 UTC
The branch main has been updated by fernape:

URL: https://cgit.FreeBSD.org/ports/commit/?id=269134561d20441dfb4f384101882e1b313a6f7d

commit 269134561d20441dfb4f384101882e1b313a6f7d
Author:     Fernando Apesteguía <fernape@FreeBSD.org>
AuthorDate: 2023-08-18 07:15:36 +0000
Commit:     Fernando Apesteguía <fernape@FreeBSD.org>
CommitDate: 2023-08-19 11:17:58 +0000

    science/afni: update to 23.2.05
---
 science/afni/Makefile                                    |  2 +-
 science/afni/distinfo                                    |  6 +++---
 .../afni/files/patch-crorden_dcm2niix__console_makefile  | 16 ++++++++--------
 3 files changed, 12 insertions(+), 12 deletions(-)

diff --git a/science/afni/Makefile b/science/afni/Makefile
index fe632f2d2cf4..c0151397bc2f 100644
--- a/science/afni/Makefile
+++ b/science/afni/Makefile
@@ -1,6 +1,6 @@
 PORTNAME=		afni
 DISTVERSIONPREFIX=	AFNI_
-DISTVERSION=		23.2.04
+DISTVERSION=		23.2.05
 CATEGORIES=		science biology graphics perl5 python
 
 MAINTAINER=	fernape@FreeBSD.org
diff --git a/science/afni/distinfo b/science/afni/distinfo
index 50a94986be61..5e689528ac90 100644
--- a/science/afni/distinfo
+++ b/science/afni/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1691650528
-SHA256 (afni-afni-AFNI_23.2.04_GH0.tar.gz) = fe05d1b2f7c0c803a11059010e7c380ec753b5acf4d96f4d23d7454639fbea30
-SIZE (afni-afni-AFNI_23.2.04_GH0.tar.gz) = 52708999
+TIMESTAMP = 1692342797
+SHA256 (afni-afni-AFNI_23.2.05_GH0.tar.gz) = 5e9009cd76e5e74e837fe173f667e967e05aca7399242b790e046d2f0f411e72
+SIZE (afni-afni-AFNI_23.2.05_GH0.tar.gz) = 52756507
diff --git a/science/afni/files/patch-crorden_dcm2niix__console_makefile b/science/afni/files/patch-crorden_dcm2niix__console_makefile
index 3fbb4ece924e..284366c03452 100644
--- a/science/afni/files/patch-crorden_dcm2niix__console_makefile
+++ b/science/afni/files/patch-crorden_dcm2niix__console_makefile
@@ -1,4 +1,4 @@
---- crorden/dcm2niix_console/makefile.orig	2021-12-19 17:24:45 UTC
+--- crorden/dcm2niix_console/makefile.orig	2023-08-17 23:49:49 UTC
 +++ crorden/dcm2niix_console/makefile
 @@ -1,5 +1,5 @@
  # Regular use
@@ -7,18 +7,18 @@
  
  # Debugging
  #CFLAGS=-g
-@@ -22,7 +22,7 @@ ifneq ($(OS),Windows_NT)
- 		#CFLAGS=-dead_strip -O3
- 	   # ponder -sectcreate later [rickr]
+@@ -35,7 +35,7 @@ ifneq ($(OS),Windows_NT)
+ 		#CFLAGS= -O3
+ 		# ponder -sectcreate later [rickr]
  		# CFLAGS=-O3 -sectcreate __TEXT __info_plist Info.plist
--		CFLAGS= -O3
-+		CXXFLAGS= -O3
+-		CFLAGS=-O3
++		CXXFLAGS=-O3
  		#Apple notarization requires a Info.plist
  		# For .app bundles, the Info.plist is a separate file, for executables it is appended as a section
  		#you can check that the Info.plist section has been inserted with either of these commands
-@@ -32,4 +32,4 @@ ifneq ($(OS),Windows_NT)
+@@ -46,4 +46,4 @@ ifneq ($(OS),Windows_NT)
  	endif
  endif
  all:
--	g++ $(CFLAGS) -I. $(JFLAGS) main_console.cpp nii_foreign.cpp nii_dicom.cpp jpg_0XC3.cpp ujpeg.cpp nifti1_io_core.cpp nii_ortho.cpp nii_dicom_batch.cpp  -o dcm2niix -DmyDisableOpenJPEG
+-	g++ $(CFLAGS) -I. $(JSFLAGS) $(JFLAGS) $(LFLAGS) main_console.cpp nii_foreign.cpp nii_dicom.cpp jpg_0XC3.cpp ujpeg.cpp nifti1_io_core.cpp nii_ortho.cpp nii_dicom_batch.cpp -o dcm2niix -DmyDisableOpenJPEG
 +	$(CXX) $(CXXFLAGS) -I. $(JFLAGS) main_console.cpp nii_foreign.cpp nii_dicom.cpp jpg_0XC3.cpp ujpeg.cpp nifti1_io_core.cpp nii_ortho.cpp nii_dicom_batch.cpp  -o dcm2niix -DmyDisableOpenJPEG