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Sat, 19 Aug 2023 11:18:23 GMT (envelope-from git) Date: Sat, 19 Aug 2023 11:18:23 GMT Message-Id: <202308191118.37JBINcr019937@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Fernando =?utf-8?Q?Apestegu=C3=ADa?= Subject: git: 269134561d20 - main - science/afni: update to 23.2.05 List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-main@freebsd.org X-BeenThere: dev-commits-ports-main@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: fernape X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 269134561d20441dfb4f384101882e1b313a6f7d Auto-Submitted: auto-generated The branch main has been updated by fernape: URL: https://cgit.FreeBSD.org/ports/commit/?id=269134561d20441dfb4f384101882e1b313a6f7d commit 269134561d20441dfb4f384101882e1b313a6f7d Author: Fernando Apesteguía AuthorDate: 2023-08-18 07:15:36 +0000 Commit: Fernando Apesteguía CommitDate: 2023-08-19 11:17:58 +0000 science/afni: update to 23.2.05 --- science/afni/Makefile | 2 +- science/afni/distinfo | 6 +++--- .../afni/files/patch-crorden_dcm2niix__console_makefile | 16 ++++++++-------- 3 files changed, 12 insertions(+), 12 deletions(-) diff --git a/science/afni/Makefile b/science/afni/Makefile index fe632f2d2cf4..c0151397bc2f 100644 --- a/science/afni/Makefile +++ b/science/afni/Makefile @@ -1,6 +1,6 @@ PORTNAME= afni DISTVERSIONPREFIX= AFNI_ -DISTVERSION= 23.2.04 +DISTVERSION= 23.2.05 CATEGORIES= science biology graphics perl5 python MAINTAINER= fernape@FreeBSD.org diff --git a/science/afni/distinfo b/science/afni/distinfo index 50a94986be61..5e689528ac90 100644 --- a/science/afni/distinfo +++ b/science/afni/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1691650528 -SHA256 (afni-afni-AFNI_23.2.04_GH0.tar.gz) = fe05d1b2f7c0c803a11059010e7c380ec753b5acf4d96f4d23d7454639fbea30 -SIZE (afni-afni-AFNI_23.2.04_GH0.tar.gz) = 52708999 +TIMESTAMP = 1692342797 +SHA256 (afni-afni-AFNI_23.2.05_GH0.tar.gz) = 5e9009cd76e5e74e837fe173f667e967e05aca7399242b790e046d2f0f411e72 +SIZE (afni-afni-AFNI_23.2.05_GH0.tar.gz) = 52756507 diff --git a/science/afni/files/patch-crorden_dcm2niix__console_makefile b/science/afni/files/patch-crorden_dcm2niix__console_makefile index 3fbb4ece924e..284366c03452 100644 --- a/science/afni/files/patch-crorden_dcm2niix__console_makefile +++ b/science/afni/files/patch-crorden_dcm2niix__console_makefile @@ -1,4 +1,4 @@ ---- crorden/dcm2niix_console/makefile.orig 2021-12-19 17:24:45 UTC +--- crorden/dcm2niix_console/makefile.orig 2023-08-17 23:49:49 UTC +++ crorden/dcm2niix_console/makefile @@ -1,5 +1,5 @@ # Regular use @@ -7,18 +7,18 @@ # Debugging #CFLAGS=-g -@@ -22,7 +22,7 @@ ifneq ($(OS),Windows_NT) - #CFLAGS=-dead_strip -O3 - # ponder -sectcreate later [rickr] +@@ -35,7 +35,7 @@ ifneq ($(OS),Windows_NT) + #CFLAGS= -O3 + # ponder -sectcreate later [rickr] # CFLAGS=-O3 -sectcreate __TEXT __info_plist Info.plist -- CFLAGS= -O3 -+ CXXFLAGS= -O3 +- CFLAGS=-O3 ++ CXXFLAGS=-O3 #Apple notarization requires a Info.plist # For .app bundles, the Info.plist is a separate file, for executables it is appended as a section #you can check that the Info.plist section has been inserted with either of these commands -@@ -32,4 +32,4 @@ ifneq ($(OS),Windows_NT) +@@ -46,4 +46,4 @@ ifneq ($(OS),Windows_NT) endif endif all: -- g++ $(CFLAGS) -I. $(JFLAGS) main_console.cpp nii_foreign.cpp nii_dicom.cpp jpg_0XC3.cpp ujpeg.cpp nifti1_io_core.cpp nii_ortho.cpp nii_dicom_batch.cpp -o dcm2niix -DmyDisableOpenJPEG +- g++ $(CFLAGS) -I. $(JSFLAGS) $(JFLAGS) $(LFLAGS) main_console.cpp nii_foreign.cpp nii_dicom.cpp jpg_0XC3.cpp ujpeg.cpp nifti1_io_core.cpp nii_ortho.cpp nii_dicom_batch.cpp -o dcm2niix -DmyDisableOpenJPEG + $(CXX) $(CXXFLAGS) -I. $(JFLAGS) main_console.cpp nii_foreign.cpp nii_dicom.cpp jpg_0XC3.cpp ujpeg.cpp nifti1_io_core.cpp nii_ortho.cpp nii_dicom_batch.cpp -o dcm2niix -DmyDisableOpenJPEG