svn commit: r504153 - head/biology/ncbi-blast+
Jason W. Bacon
jwb at FreeBSD.org
Fri Jun 14 00:38:00 UTC 2019
Author: jwb
Date: Fri Jun 14 00:37:59 2019
New Revision: 504153
URL: https://svnweb.freebsd.org/changeset/ports/504153
Log:
biology/ncbi-blast+: Fix build on powerpc64, add run dep for update_blastdb.pl
Modified:
head/biology/ncbi-blast+/Makefile
Modified: head/biology/ncbi-blast+/Makefile
==============================================================================
--- head/biology/ncbi-blast+/Makefile Fri Jun 14 00:28:49 2019 (r504152)
+++ head/biology/ncbi-blast+/Makefile Fri Jun 14 00:37:59 2019 (r504153)
@@ -13,8 +13,6 @@ COMMENT= NCBI implementation of Basic Local Alignment
LICENSE= PD
LICENSE_FILE= ${WRKSRC}/scripts/projects/blast/LICENSE
-BROKEN_powerpc64= fails to build: Error 2
-
LIB_DEPENDS= libpcre.so:devel/pcre \
liblmdb.so:databases/lmdb \
liblzo2.so:archivers/lzo2 \
@@ -29,7 +27,8 @@ LIB_DEPENDS= libpcre.so:devel/pcre \
libgcrypt.so:security/libgcrypt \
libgpg-error.so:security/libgpg-error \
libsqlite3.so:databases/sqlite3
-RUN_DEPENDS= p5-List-MoreUtils>=0:lang/p5-List-MoreUtils
+RUN_DEPENDS= p5-List-MoreUtils>=0:lang/p5-List-MoreUtils \
+ p5-JSON>=0:converters/p5-JSON
USES= compiler:openmp gmake shebangfix perl5 python
USE_LDCONFIG= yes
@@ -48,10 +47,17 @@ CONFIGURE_ARGS= AR="ar cr" --without-boost --libdir=${
WRKSRC_SUBDIR= c++
+.include <bsd.port.pre.mk>
+
+# Force newer GCC on platforms using GCC 4.2 as base
+.if ${CHOSEN_COMPILER_TYPE} == gcc
+USE_GCC= yes
+.endif
+
post-install:
@${RM} ${STAGEDIR}${PREFIX}/include/ncbi-tools++/*/*/.cvsignore.extra
@${RM} -rf ${STAGEDIR}${PREFIX}/lib/X11
@${RMDIR} ${STAGEDIR}${PREFIX}/lib/debug
${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/ncbi-tools++/*.so
-.include <bsd.port.mk>
+.include <bsd.port.post.mk>
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