svn commit: r536875 - head/biology/py-biopython
Jason W. Bacon
jwb at FreeBSD.org
Fri May 29 02:03:30 UTC 2020
Author: jwb
Date: Fri May 29 02:03:29 2020
New Revision: 536875
URL: https://svnweb.freebsd.org/changeset/ports/536875
Log:
biology/py-biopython: Upgrade to 1.77
Upstream support for python 3
PR: ports/246763
Submitted by: Mauricio Herrera Cuadra <mauricio at arareko.net>
Modified:
head/biology/py-biopython/Makefile
head/biology/py-biopython/distinfo
Modified: head/biology/py-biopython/Makefile
==============================================================================
--- head/biology/py-biopython/Makefile Fri May 29 02:00:00 2020 (r536874)
+++ head/biology/py-biopython/Makefile Fri May 29 02:03:29 2020 (r536875)
@@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= biopython
-PORTVERSION= 1.73
-PORTREVISION= 1
+DISTVERSION= 1.77
CATEGORIES= biology python
MASTER_SITES= http://www.biopython.org/DIST/
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -20,13 +19,16 @@ RUN_DEPENDS= ${PYNUMPY}
USES= python
USE_PYTHON= distutils autoplist
-OPTIONS_DEFINE= REPORTLAB
+OPTIONS_DEFINE= REPORTLAB
OPTIONS_DEFAULT= REPORTLAB
-REPORTLAB_DESC= PDF support in Bio.Graphics module
+REPORTLAB_DESC= PDF support in Bio.Graphics module
REPORTLAB_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}reportlab>0:print/py-reportlab@${PY_FLAVOR}
-pre-configure: # unbreak for python3: README.rst can't be decoded with the ascii codec: https://github.com/biopython/biopython/issues/1649
- @truncate -s 0 ${WRKSRC}/README.rst
+post-install:
+ @${STRIP_CMD} \
+ ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/Bio/*.so \
+ ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/Bio/*/*.so \
+ ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/Bio/*/*/*.so \
.include <bsd.port.mk>
Modified: head/biology/py-biopython/distinfo
==============================================================================
--- head/biology/py-biopython/distinfo Fri May 29 02:00:00 2020 (r536874)
+++ head/biology/py-biopython/distinfo Fri May 29 02:03:29 2020 (r536875)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1545454134
-SHA256 (biopython-1.73.tar.gz) = 70c5cc27dc61c23d18bb33b6d38d70edc4b926033aea3b7434737c731c94a5e0
-SIZE (biopython-1.73.tar.gz) = 15715102
+TIMESTAMP = 1590688894
+SHA256 (biopython-1.77.tar.gz) = fb1936e9ca9e7af8de1050e84375f23328e04b801063edf0ad73733494d8ec42
+SIZE (biopython-1.77.tar.gz) = 16837021
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