svn commit: r489412 - in head: audio/csound biology/kallisto cad/freecad cad/gmsh devel/py-tables graphics/alembic graphics/blender graphics/caffe graphics/gdal graphics/opencv graphics/openimageio...

Sunpoet Po-Chuan Hsieh sunpoet at FreeBSD.org
Sat Jan 5 22:47:10 UTC 2019 

Author: sunpoet
Date: Sat Jan  5 22:46:53 2019
New Revision: 489412
URL: https://svnweb.freebsd.org/changeset/ports/489412

Log:
  Update science/hdf5 to 1.10.4
  
  - Bump PORTREVISION of dependent ports for shlib change
  
  Changes:	https://portal.hdfgroup.org/display/support/HDF5%201.10.4#releasenotes
  PR:		233070
  Submitted by:	wen

Deleted:
  head/science/hdf5/files/
Modified:
  head/audio/csound/Makefile
  head/biology/kallisto/Makefile
  head/cad/freecad/Makefile
  head/cad/gmsh/Makefile
  head/devel/py-tables/Makefile
  head/graphics/alembic/Makefile
  head/graphics/blender/Makefile
  head/graphics/caffe/Makefile
  head/graphics/gdal/Makefile
  head/graphics/opencv/Makefile
  head/graphics/openimageio/Makefile
  head/graphics/vigra/Makefile
  head/graphics/vips/Makefile
  head/graphics/vv/Makefile
  head/math/ambit/Makefile
  head/math/armadillo/Makefile
  head/math/deal.ii/Makefile
  head/math/dynare/Makefile
  head/math/flann/Makefile
  head/math/labplot/Makefile
  head/math/libmesh/Makefile
  head/math/mathgl/Makefile
  head/math/matio/Makefile
  head/math/moab/Makefile
  head/math/octave/Makefile
  head/math/pdal/Makefile
  head/math/scilab/Makefile
  head/science/ALPSCore/Makefile
  head/science/InsightToolkit/Makefile
  head/science/MOOSE-neural-simulator/Makefile
  head/science/avogadro2/Makefile
  head/science/avogadrolibs/Makefile
  head/science/cdo/Makefile
  head/science/cgnslib/Makefile
  head/science/chemps2/Makefile
  head/science/chrono/Makefile
  head/science/code_saturne/Makefile
  head/science/dft_tools/Makefile
  head/science/erkale/Makefile
  head/science/fleur/Makefile
  head/science/gnudatalanguage/Makefile
  head/science/h5utils/Makefile
  head/science/h5z-zfp/Makefile
  head/science/hdf5/Makefile
  head/science/hdf5/distinfo
  head/science/hdf5/pkg-plist
  head/science/jdftx/Makefile
  head/science/lm/Makefile
  head/science/meep/Makefile
  head/science/minc2/Makefile
  head/science/mpb/Makefile
  head/science/netcdf/Makefile
  head/science/paraview/Makefile
  head/science/py-h5py/Makefile
  head/science/py-netCDF4/Makefile
  head/science/qmcpack/Makefile
  head/science/rmf/Makefile
  head/science/silo/Makefile
  head/science/triqs/Makefile
  head/sysutils/slurm-wlm/Makefile

Modified: head/audio/csound/Makefile
==============================================================================
--- head/audio/csound/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/audio/csound/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,7 +4,7 @@
 PORTNAME=	csound
 DISTVERSION=	6.12.2-83
 DISTVERSIONSUFFIX=	-gdf2edd269
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	audio lang
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/biology/kallisto/Makefile
==============================================================================
--- head/biology/kallisto/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/biology/kallisto/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 PORTNAME=	kallisto
 DISTVERSIONPREFIX=	v
 DISTVERSION=	0.43.1
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	biology
 
 MAINTAINER=	jwb at FreeBSD.org

Modified: head/cad/freecad/Makefile
==============================================================================
--- head/cad/freecad/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/cad/freecad/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 PORTNAME=	FreeCAD
 DISTVERSION=	0.17-13541 # git rev-list --count
 DISTVERSIONSUFFIX=	-g9948ee4f1
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	cad
 
 MAINTAINER=	ports at FreeBSD.org

Modified: head/cad/gmsh/Makefile
==============================================================================
--- head/cad/gmsh/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/cad/gmsh/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,6 +3,7 @@
 
 PORTNAME=	gmsh
 DISTVERSION=	4.0.7
+PORTREVISION=	1
 CATEGORIES=	cad
 MASTER_SITES=	http://gmsh.info/src/
 DISTNAME=	${PORTNAME}-${PORTVERSION}-source

Modified: head/devel/py-tables/Makefile
==============================================================================
--- head/devel/py-tables/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/devel/py-tables/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	tables
 PORTVERSION=	3.4.4
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	devel python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}

Modified: head/graphics/alembic/Makefile
==============================================================================
--- head/graphics/alembic/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/alembic/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,6 +3,7 @@
 
 PORTNAME=	alembic
 PORTVERSION=	1.7.10
+PORTREVISION=	1
 CATEGORIES=	graphics
 
 MAINTAINER=	danfe at FreeBSD.org

Modified: head/graphics/blender/Makefile
==============================================================================
--- head/graphics/blender/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/blender/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	blender
 PORTVERSION=	2.79b
-PORTREVISION=	9
+PORTREVISION=	10
 CATEGORIES=	graphics games
 MASTER_SITES=	http://download.blender.org/source/ \
 		http://mirror.cs.umn.edu/blender.org/source/ \

Modified: head/graphics/caffe/Makefile
==============================================================================
--- head/graphics/caffe/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/caffe/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	caffe
 PORTVERSION=	1.0
-PORTREVISION=	18
+PORTREVISION=	19
 CATEGORIES=	graphics
 
 MAINTAINER=	eric at camachat.org

Modified: head/graphics/gdal/Makefile
==============================================================================
--- head/graphics/gdal/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/gdal/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	gdal
 PORTVERSION=	2.2.4
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	graphics geography
 MASTER_SITES=	https://download.osgeo.org/gdal/${PORTVERSION}/ \
 		ftp://ftp.remotesensing.org/pub/gdal/${PORTVERSION}/ \

Modified: head/graphics/opencv/Makefile
==============================================================================
--- head/graphics/opencv/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/opencv/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	opencv
 PORTVERSION=	3.4.1
-PORTREVISION=	12
+PORTREVISION=	13
 CATEGORIES=	graphics
 
 MAINTAINER=	ports at FreeBSD.org

Modified: head/graphics/openimageio/Makefile
==============================================================================
--- head/graphics/openimageio/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/openimageio/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,7 +4,7 @@
 PORTNAME=	openimageio
 PORTVERSION=	1.8.17
 DISTVERSIONPREFIX=	Release-
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES?=	graphics multimedia
 
 MAINTAINER?=	FreeBSD at Shaneware.biz

Modified: head/graphics/vigra/Makefile
==============================================================================
--- head/graphics/vigra/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/vigra/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,6 +4,7 @@
 PORTNAME=	vigra
 DISTVERSIONPREFIX=v
 DISTVERSION=	1.11.1
+PORTREVISION=	1
 CATEGORIES=	graphics
 
 MAINTAINER=	ports at FreeBSD.org

Modified: head/graphics/vips/Makefile
==============================================================================
--- head/graphics/vips/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/vips/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	vips
 PORTVERSION=	8.7.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	graphics
 MASTER_SITES=	https://github.com/libvips/libvips/releases/download/v${PORTVERSION}/
 

Modified: head/graphics/vv/Makefile
==============================================================================
--- head/graphics/vv/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/graphics/vv/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,7 +4,7 @@ PORTNAME=	vv
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.4.0-271
 DISTVERSIONSUFFIX=	-g24b75af3
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	graphics
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/math/ambit/Makefile
==============================================================================
--- head/math/ambit/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/ambit/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,7 +4,7 @@ PORTNAME=	ambit
 DISTVERSIONPREFIX=	v
 DISTVERSION=	0.2-37
 DISTVERSIONSUFFIX=	-g9c7049a
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	math
 PKGNAMESUFFIX=	-tensor # avoid clash with shells/ambit
 

Modified: head/math/armadillo/Makefile
==============================================================================
--- head/math/armadillo/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/armadillo/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,6 +2,7 @@
 
 PORTNAME=	armadillo
 PORTVERSION=	9.200.6
+PORTREVISION=	1
 CATEGORIES=	math
 MASTER_SITES=	SF/arma
 

Modified: head/math/deal.ii/Makefile
==============================================================================
--- head/math/deal.ii/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/deal.ii/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 PORTNAME=	deal.II
 DISTVERSIONPREFIX=	v
 DISTVERSION=	9.0.1
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	math
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/math/dynare/Makefile
==============================================================================
--- head/math/dynare/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/dynare/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	dynare
 DISTVERSION=	4.5.6
-PORTREVISION=	4
+PORTREVISION=	5
 CATEGORIES=	math
 MASTER_SITES=	http://www.dynare.org/release/source/
 

Modified: head/math/flann/Makefile
==============================================================================
--- head/math/flann/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/flann/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 PORTNAME=	flann
 DISTVERSION=	1.9.1-19
 DISTVERSIONSUFFIX=	-gf3a17cd
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	math
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/math/labplot/Makefile
==============================================================================
--- head/math/labplot/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/labplot/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	labplot
 PORTVERSION=	2.5.0
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	math kde
 MASTER_SITES=	KDE/stable/${PORTNAME}/${PORTVERSION}
 

Modified: head/math/libmesh/Makefile
==============================================================================
--- head/math/libmesh/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/libmesh/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,7 +4,7 @@
 PORTNAME=	libmesh
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.3.1
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	math
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/math/mathgl/Makefile
==============================================================================
--- head/math/mathgl/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/mathgl/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	mathgl
 DISTVERSION=	2.4.2.1
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	math graphics
 MASTER_SITES=	SF/${PORTNAME}/${PORTNAME}/${PORTNAME}%20${PORTVERSION:R}
 

Modified: head/math/matio/Makefile
==============================================================================
--- head/math/matio/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/matio/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,6 +3,7 @@
 
 PORTNAME=	matio
 PORTVERSION=	1.5.13
+PORTREVISION=	1
 CATEGORIES=	math
 MASTER_SITES=	SF
 

Modified: head/math/moab/Makefile
==============================================================================
--- head/math/moab/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/moab/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	moab
 DISTVERSION=	5.0.0
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	math
 MASTER_SITES=	https://bitbucket.org/${BB_ACCOUNT}/${BB_PROJECT}/get/${BB_COMMIT}.tar.gz?dummy=/
 

Modified: head/math/octave/Makefile
==============================================================================
--- head/math/octave/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/octave/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	octave
 PORTVERSION=	${OCTAVE_VERSION}
-PORTREVISION=	7
+PORTREVISION=	8
 CATEGORIES=	math java
 MASTER_SITES=	GNU
 

Modified: head/math/pdal/Makefile
==============================================================================
--- head/math/pdal/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/pdal/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	pdal
 DISTVERSION=	1.7.2
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	math databases graphics
 
 MAINTAINER=	lbartoletti at tuxfamily.org

Modified: head/math/scilab/Makefile
==============================================================================
--- head/math/scilab/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/math/scilab/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	scilab
 PORTVERSION=	5.5.2
-PORTREVISION=	15
+PORTREVISION=	16
 CATEGORIES=	math cad java
 MASTER_SITES=	https://www.scilab.org/download/${PORTVERSION}/
 DISTFILES=	${DISTNAME}-src${EXTRACT_SUFX}

Modified: head/science/ALPSCore/Makefile
==============================================================================
--- head/science/ALPSCore/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/ALPSCore/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 PORTNAME=	ALPSCore
 DISTVERSIONPREFIX=	v
 DISTVERSION=	2.2.0
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 
 MAINTAINER=	mike.d.ft402 at gmail.com

Modified: head/science/InsightToolkit/Makefile
==============================================================================
--- head/science/InsightToolkit/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/InsightToolkit/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	InsightToolkit
 PORTVERSION=	4.13.0
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science biology
 MASTER_SITES=	SF/itk/itk/${ITK_VER}
 

Modified: head/science/MOOSE-neural-simulator/Makefile
==============================================================================
--- head/science/MOOSE-neural-simulator/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/MOOSE-neural-simulator/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	MOOSE-neural-simulator
 DISTVERSION=	3.1.2
-PORTREVISION=	6
+PORTREVISION=	7
 DISTVERSIONSUFFIX=	-382-gc93d23a
 CATEGORIES=	science biology
 

Modified: head/science/avogadro2/Makefile
==============================================================================
--- head/science/avogadro2/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/avogadro2/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	avogadro2
 DISTVERSION=	1.91.0
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/avogadrolibs/Makefile
==============================================================================
--- head/science/avogadrolibs/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/avogadrolibs/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	avogadrolibs
 DISTVERSION=	1.92.0
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 
 PATCH_SITES=	https://github.com/${GH_ACCOUNT}/${PORTNAME}/commit/

Modified: head/science/cdo/Makefile
==============================================================================
--- head/science/cdo/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/cdo/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	cdo
 PORTVERSION=	1.9.5
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science
 MASTER_SITES=	https://code.mpimet.mpg.de/attachments/download/18264/ \
 		LOCAL/sunpoet

Modified: head/science/cgnslib/Makefile
==============================================================================
--- head/science/cgnslib/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/cgnslib/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,7 +4,7 @@
 PORTNAME=	cgnslib
 DISTVERSIONPREFIX=	v
 DISTVERSION=	3.3.1
-PORTREVISION=	1
+PORTREVISION=	2
 PORTEPOCH=	1
 CATEGORIES=	science
 

Modified: head/science/chemps2/Makefile
==============================================================================
--- head/science/chemps2/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/chemps2/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 PORTNAME=	CheMPS2
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.8.9
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/chrono/Makefile
==============================================================================
--- head/science/chrono/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/chrono/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 PORTNAME=	chrono
 DISTVERSION=	2.0.0-9070
 DISTVERSIONSUFFIX=	-g57a828dc0
-PORTREVISION=	2
+PORTREVISION=	3
 CATEGORIES=	science devel
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/code_saturne/Makefile
==============================================================================
--- head/science/code_saturne/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/code_saturne/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	code_saturne
 PORTVERSION=	5.3.1
-PORTREVISION=	1
+PORTREVISION=	2
 DISTVERSIONPREFIX=	v
 CATEGORIES=	science parallel
 

Modified: head/science/dft_tools/Makefile
==============================================================================
--- head/science/dft_tools/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/dft_tools/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	dft_tools
 DISTVERSION=	1.5
-PORTREVISION=	5
+PORTREVISION=	6
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/erkale/Makefile
==============================================================================
--- head/science/erkale/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/erkale/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	erkale
 DISTVERSION=	g20181121
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/fleur/Makefile
==============================================================================
--- head/science/fleur/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/fleur/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	fleur
 DISTVERSION=	0.27-3 # Release 3 of Version 0.27
-PORTREVISION=	4
+PORTREVISION=	5
 CATEGORIES=	science
 MASTER_SITES=	http://www.flapw.de/pm/uploads/FLEUR/
 DISTNAME=	fleurMaXR${DISTVERSION:C/.*-//}

Modified: head/science/gnudatalanguage/Makefile
==============================================================================
--- head/science/gnudatalanguage/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/gnudatalanguage/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	gnudatalanguage
 PORTVERSION=	0.9.9
-PORTREVISION=	2
+PORTREVISION=	3
 DISTVERSIONPREFIX=	v
 CATEGORIES=	science lang
 .if defined(BUILD_PYTHON_MODULE)

Modified: head/science/h5utils/Makefile
==============================================================================
--- head/science/h5utils/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/h5utils/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	h5utils
 DISTVERSION=	1.13.1
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science
 
 MAINTAINER=	aehlig at linta.de

Modified: head/science/h5z-zfp/Makefile
==============================================================================
--- head/science/h5z-zfp/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/h5z-zfp/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,6 +3,7 @@
 PORTNAME=	h5z-zfp
 DISTVERSIONPREFIX=	v
 DISTVERSION=	0.9.0
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/hdf5/Makefile
==============================================================================
--- head/science/hdf5/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/hdf5/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	hdf5
-PORTVERSION=	1.10.2
-PORTREVISION=	1
+PORTVERSION=	1.10.4
 CATEGORIES=	science archivers graphics
 MASTER_SITES=	https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${PORTVERSION:R}/${DISTNAME}/src/ \
 		LOCAL/sunpoet

Modified: head/science/hdf5/distinfo
==============================================================================
--- head/science/hdf5/distinfo	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/hdf5/distinfo	Sat Jan  5 22:46:53 2019	(r489412)
@@ -1,3 +1,3 @@
-TIMESTAMP = 1523098063
-SHA256 (hdf5-1.10.2.tar.bz2) = 1cad5b7bfdf128dfc53cd16fba48f6e7ae4e93c75c371d9ec8dfc4df0c1fcb71
-SIZE (hdf5-1.10.2.tar.bz2) = 8609163
+TIMESTAMP = 1541673300
+SHA256 (hdf5-1.10.4.tar.bz2) = 1267ff06aaedc04ca25f7c6026687ea2884b837043431195f153401d942b28df
+SIZE (hdf5-1.10.4.tar.bz2) = 8598986

Modified: head/science/hdf5/pkg-plist
==============================================================================
--- head/science/hdf5/pkg-plist	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/hdf5/pkg-plist	Sat Jan  5 22:46:53 2019	(r489412)
@@ -34,6 +34,7 @@ include/H5CppDoc.h
 include/H5Cpublic.h
 include/H5DOpublic.h
 include/H5DSpublic.h
+include/H5DaccProp.h
 include/H5DataSet.h
 include/H5DataSpace.h
 include/H5DataType.h
@@ -136,25 +137,25 @@ include/hdf5_hl.h
 lib/libhdf5.a
 lib/libhdf5.settings
 lib/libhdf5.so
-lib/libhdf5.so.101
-lib/libhdf5.so.101.1.0
+lib/libhdf5.so.103
+lib/libhdf5.so.103.0.0
 lib/libhdf5_cpp.a
 lib/libhdf5_cpp.so
-lib/libhdf5_cpp.so.102
-lib/libhdf5_cpp.so.102.0.0
+lib/libhdf5_cpp.so.103
+lib/libhdf5_cpp.so.103.0.0
 %%FORTRAN%%lib/libhdf5_fortran.a
 %%FORTRAN%%lib/libhdf5_fortran.so
 %%FORTRAN%%lib/libhdf5_fortran.so.100
-%%FORTRAN%%lib/libhdf5_fortran.so.100.1.1
+%%FORTRAN%%lib/libhdf5_fortran.so.100.1.2
 lib/libhdf5_hl.a
 lib/libhdf5_hl.so
 lib/libhdf5_hl.so.100
-lib/libhdf5_hl.so.100.1.0
+lib/libhdf5_hl.so.100.1.1
 lib/libhdf5_hl_cpp.a
 lib/libhdf5_hl_cpp.so
 lib/libhdf5_hl_cpp.so.100
-lib/libhdf5_hl_cpp.so.100.1.1
+lib/libhdf5_hl_cpp.so.100.1.2
 %%FORTRAN%%lib/libhdf5hl_fortran.a
 %%FORTRAN%%lib/libhdf5hl_fortran.so
 %%FORTRAN%%lib/libhdf5hl_fortran.so.100
-%%FORTRAN%%lib/libhdf5hl_fortran.so.100.0.2
+%%FORTRAN%%lib/libhdf5hl_fortran.so.100.0.3

Modified: head/science/jdftx/Makefile
==============================================================================
--- head/science/jdftx/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/jdftx/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 PORTNAME=	jdftx
 DISTVERSIONPREFIX=	v
 DISTVERSION=	1.4.2-74
-PORTREVISION=	3
+PORTREVISION=	4
 DISTVERSIONSUFFIX=	-gba743849
 CATEGORIES=	science
 

Modified: head/science/lm/Makefile
==============================================================================
--- head/science/lm/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/lm/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	lm
 DISTVERSION=	2.3.0
-PORTREVISION=	3
+PORTREVISION=	4
 DISTVERSIONSUFFIX=	-src
 CATEGORIES=	science
 MASTER_SITES=	http://scs.illinois.edu/schulten/${PORTNAME}/download/${PORTNAME}${DISTVERSION:R:S/.//}/

Modified: head/science/meep/Makefile
==============================================================================
--- head/science/meep/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/meep/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	meep
 PORTVERSION=	1.2.1
-PORTREVISION=	16
+PORTREVISION=	17
 CATEGORIES=	science
 MASTER_SITES=	http://ab-initio.mit.edu/meep/
 

Modified: head/science/minc2/Makefile
==============================================================================
--- head/science/minc2/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/minc2/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,7 +4,7 @@
 PORTNAME=	minc
 PORTVERSION=	2.2.00
 DISTVERSIONPREFIX=	release-
-PORTREVISION=	7
+PORTREVISION=	8
 PORTEPOCH=	1
 CATEGORIES=	science biology
 PKGNAMESUFFIX=	2

Modified: head/science/mpb/Makefile
==============================================================================
--- head/science/mpb/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/mpb/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	mpb
 PORTVERSION=	1.5
-PORTREVISION=	11
+PORTREVISION=	12
 CATEGORIES=	science
 MASTER_SITES=	http://ab-initio.mit.edu/mpb/
 

Modified: head/science/netcdf/Makefile
==============================================================================
--- head/science/netcdf/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/netcdf/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	netcdf
 PORTVERSION=	4.6.1
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 MASTER_SITES=	https://www.unidata.ucar.edu/downloads/netcdf/ftp/ \
 		ftp://ftp.unidata.ucar.edu/pub/netcdf/ \

Modified: head/science/paraview/Makefile
==============================================================================
--- head/science/paraview/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/paraview/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	paraview
 DISTVERSION=	5.5.1
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science graphics
 MASTER_SITES=	http://www.paraview.org/files/v${VERMAJORMINOR}/
 DISTNAME=	ParaView-v${PORTVERSION}

Modified: head/science/py-h5py/Makefile
==============================================================================
--- head/science/py-h5py/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/py-h5py/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,6 +3,7 @@
 
 PORTNAME=	h5py
 PORTVERSION=	2.9.0
+PORTREVISION=	1
 CATEGORIES=	science python
 MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}

Modified: head/science/py-netCDF4/Makefile
==============================================================================
--- head/science/py-netCDF4/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/py-netCDF4/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,7 +3,7 @@
 
 PORTNAME=	netCDF4
 PORTVERSION=	1.3.1
-PORTREVISION=	3
+PORTREVISION=	4
 DISTVERSIONPREFIX=	v
 DISTVERSIONSUFFIX=	rel
 CATEGORIES=	science python

Modified: head/science/qmcpack/Makefile
==============================================================================
--- head/science/qmcpack/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/qmcpack/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -3,6 +3,7 @@
 PORTNAME=	qmcpack
 DISTVERSIONPREFIX=	v
 DISTVERSION=	3.6.0
+PORTREVISION=	1
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/rmf/Makefile
==============================================================================
--- head/science/rmf/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/rmf/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	rmf
 DISTVERSION=	1.1
-PORTREVISION=	3
+PORTREVISION=	4
 CATEGORIES=	science graphics
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/science/silo/Makefile
==============================================================================
--- head/science/silo/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/silo/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -4,7 +4,7 @@
 PORTNAME=	silo
 PORTVERSION=	4.10.2
 DISTVERSIONSUFFIX=	-bsd
-PORTREVISION=	9
+PORTREVISION=	10
 CATEGORIES=	science
 MASTER_SITES=	http://wci.llnl.gov/content/assets/docs/simulation/computer-codes/${PORTNAME}/silo-${PORTVERSION}/
 

Modified: head/science/triqs/Makefile
==============================================================================
--- head/science/triqs/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/science/triqs/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	triqs
 DISTVERSION=	2.0
-PORTREVISION=	6
+PORTREVISION=	7
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org

Modified: head/sysutils/slurm-wlm/Makefile
==============================================================================
--- head/sysutils/slurm-wlm/Makefile	Sat Jan  5 22:46:44 2019	(r489411)
+++ head/sysutils/slurm-wlm/Makefile	Sat Jan  5 22:46:53 2019	(r489412)
@@ -2,7 +2,7 @@
 
 PORTNAME=	slurm
 DISTVERSION=	17.02.11
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	sysutils
 MASTER_SITES=	http://www.schedmd.com/download/latest/ \
 		http://www.schedmd.com/download/archive/ \

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