svn commit: r397849 - in head/biology: . fastool

[Ruslan Makhmatkhanov]

Author: rm
Date: Fri Sep 25 18:35:14 2015
New Revision: 397849
URL: https://svnweb.freebsd.org/changeset/ports/397849

Log:
  Simple and quick FastQ and FastA tool for file reading and conversion.
  
  WWW: https://github.com/fstrozzi/Fastool
  
  PR:		203293
  Submitted by:	Jason Bacon <jwbacon at tds.net>

Added:
  head/biology/fastool/
  head/biology/fastool/Makefile   (contents, props changed)
  head/biology/fastool/distinfo   (contents, props changed)
  head/biology/fastool/pkg-descr   (contents, props changed)
Modified:
  head/biology/Makefile

Modified: head/biology/Makefile
==============================================================================
--- head/biology/Makefile	Fri Sep 25 18:34:29 2015	(r397848)
+++ head/biology/Makefile	Fri Sep 25 18:35:14 2015	(r397849)
@@ -20,6 +20,7 @@
     SUBDIR += fasta
     SUBDIR += fasta3
     SUBDIR += fastdnaml
+    SUBDIR += fastool
     SUBDIR += fasttree
     SUBDIR += fastx-toolkit
     SUBDIR += fluctuate

Added: head/biology/fastool/Makefile
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/fastool/Makefile	Fri Sep 25 18:35:14 2015	(r397849)
@@ -0,0 +1,33 @@
+# Created by: Jason Bacon <jwbacon at tds.net>
+# $FreeBSD$
+
+PORTNAME=	fastool
+PORTVERSION=	0.1.4
+CATEGORIES=	biology
+
+MAINTAINER=	jwbacon at tds.net
+COMMENT=	Simple and quick FastQ and FastA tool for file reading and conversion
+
+LICENSE=	BSD2CLAUSE
+
+USE_GITHUB=	yes
+GH_ACCOUNT=	fstrozzi
+GH_PROJECT=	Fastool
+
+WRKSRC=		${WRKDIR}/Fastool-${PORTVERSION}
+
+PLIST_FILES=	bin/fastool
+
+CFLAGS+=	-std=c99
+
+post-patch:
+	${REINPLACE_CMD} \
+		-e 's|CC *=|CC ?=|g' \
+		-e 's|CFLAGS *=|CFLAGS ?=|g' \
+		${WRKSRC}/Makefile
+
+do-install:
+	${INSTALL_PROGRAM} ${WRKSRC}/fastool \
+		${STAGEDIR}${PREFIX}/bin
+
+.include <bsd.port.mk>

Added: head/biology/fastool/distinfo
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/fastool/distinfo	Fri Sep 25 18:35:14 2015	(r397849)
@@ -0,0 +1,2 @@
+SHA256 (fstrozzi-Fastool-0.1.4_GH0.tar.gz) = f86f02fced9479b77d6d27a442b66e66f0c55d40d5ad2ddd91a752de57024540
+SIZE (fstrozzi-Fastool-0.1.4_GH0.tar.gz) = 6346

Added: head/biology/fastool/pkg-descr
==============================================================================
--- /dev/null	00:00:00 1970	(empty, because file is newly added)
+++ head/biology/fastool/pkg-descr	Fri Sep 25 18:35:14 2015	(r397849)
@@ -0,0 +1,3 @@
+Simple and quick FastQ and FastA tool for file reading and conversion.
+
+WWW: https://github.com/fstrozzi/Fastool