svn commit: r363015 - in head/biology/p5-bioperl: . files

[Wen Heping]

Author: wen
Date: Sun Jul 27 07:27:17 2014
New Revision: 363015
URL: http://svnweb.freebsd.org/changeset/ports/363015
QAT: https://qat.redports.org/buildarchive/r363015/

Log:
  - Update to 1.6.924 [1]
  - Reset maintainer to perl@
  
  PR:		192088 [1]
  Submitted by:	Kurt Jaeger<pi at FreeBSD.org> [1]

Modified:
  head/biology/p5-bioperl/Makefile
  head/biology/p5-bioperl/distinfo
  head/biology/p5-bioperl/files/patch-Bio-Root-Build.pm

Modified: head/biology/p5-bioperl/Makefile
==============================================================================
--- head/biology/p5-bioperl/Makefile	Sun Jul 27 06:40:28 2014	(r363014)
+++ head/biology/p5-bioperl/Makefile	Sun Jul 27 07:27:17 2014	(r363015)
@@ -2,14 +2,14 @@
 # $FreeBSD$
 
 PORTNAME=	bioperl
-PORTVERSION=	1.6.923
+PORTVERSION=	1.6.924
 CATEGORIES=	biology perl5
 MASTER_SITES=	CPAN
 MASTER_SITE_SUBDIR=	CPAN:CJFIELDS
 PKGNAMEPREFIX=	p5-
 DISTNAME=	BioPerl-${PORTVERSION}
 
-MAINTAINER=	wen at FreeBSD.org
+MAINTAINER=	perl at FreeBSD.org
 COMMENT=	Collection of Perl modules for bioinformatics
 
 LICENSE=	ART10 GPLv1

Modified: head/biology/p5-bioperl/distinfo
==============================================================================
--- head/biology/p5-bioperl/distinfo	Sun Jul 27 06:40:28 2014	(r363014)
+++ head/biology/p5-bioperl/distinfo	Sun Jul 27 07:27:17 2014	(r363015)
@@ -1,2 +1,2 @@
-SHA256 (BioPerl-1.6.923.tar.gz) = 6f6ada4ebd51ad223662e4b1ddcccc37a4fb8c47f3ecbbf060e6844d361730cd
-SIZE (BioPerl-1.6.923.tar.gz) = 12562520
+SHA256 (BioPerl-1.6.924.tar.gz) = 616a7546bb3c58504de27304a0f6cb904e18b6bbcdb6a4ec8454f2bd37bb76d0
+SIZE (BioPerl-1.6.924.tar.gz) = 12623118

Modified: head/biology/p5-bioperl/files/patch-Bio-Root-Build.pm
==============================================================================
--- head/biology/p5-bioperl/files/patch-Bio-Root-Build.pm	Sun Jul 27 06:40:28 2014	(r363014)
+++ head/biology/p5-bioperl/files/patch-Bio-Root-Build.pm	Sun Jul 27 07:27:17 2014	(r363015)
@@ -1,6 +1,6 @@
---- Bio/Root/Build.pm.orig	2009-09-30 00:33:53.000000000 +0800
-+++ Bio/Root/Build.pm	2009-12-01 10:31:39.000000000 +0800
-@@ -127,49 +127,9 @@
+--- Bio/Root/Build.pm.orig	2014-07-10 22:13:23.000000000 +0200
++++ Bio/Root/Build.pm	2014-07-24 11:55:59.000000000 +0200
+@@ -83,49 +83,9 @@
          }
      }
      closedir($scripts_dir);
@@ -52,11 +52,12 @@
  
      print "\n";
  }
-@@ -1136,21 +1096,9 @@
+@@ -1153,22 +1113,9 @@
  sub prompt_for_network {
      my ($self, $accept) = @_;
  
--    my $proceed = $accept ? 0 : $self->y_n("Do you want to run tests that require connection to servers across the internet\n(likely to cause some failures)? y/n", 'n');
+-    my $proceed = $accept ? 0 : $self->y_n(  "Do you want to run tests that require connection to servers across the internet\n"
+-                                           . "(likely to cause some failures)? y/n", 'n');
 -
 -    if ($proceed) {
 -        $self->notes('network' => 1);
@@ -76,4 +77,4 @@
 +    $self->log_info("  - will not run internet-requiring tests\n");
  }
  
- # override the build script warnings flag
+ =head2 print_build_script