svn commit: r361934 - head/biology/hmmer

[Adam Weinberger]

Author: adamw
Date: Tue Jul 15 14:54:54 2014
New Revision: 361934
URL: http://svnweb.freebsd.org/changeset/ports/361934
QAT: https://qat.redports.org/buildarchive/r361934/

Log:
  Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS.
  
  While here, use OPTIONS helpers and re-enable manpage installation.

Modified:
  head/biology/hmmer/Makefile
  head/biology/hmmer/pkg-plist

Modified: head/biology/hmmer/Makefile
==============================================================================
--- head/biology/hmmer/Makefile	Tue Jul 15 14:42:26 2014	(r361933)
+++ head/biology/hmmer/Makefile	Tue Jul 15 14:54:54 2014	(r361934)
@@ -18,29 +18,23 @@ DOCFILES=	COPYRIGHT INSTALL LICENSE User
 EXAMPLES=	7LESS_DROME Pkinase.sto fn3.sto globins4.sto minifam.h3f minifam.h3p \
 		HBB_HUMAN fn3.hmm globins4.hmm globins45.fa minifam.h3i \
 		Pkinase.hmm fn3.out globins4.out minifam minifam.h3m
-#MAN1=		hmmalign.1 hmmbuild.1 hmmcalibrate.1 hmmconvert.1 hmmemit.1 \
-#		hmmer.1 hmmfetch.1 hmmindex.1 hmmpfam.1 hmmsearch.1
 
-OPTIONS_DEFINE=	PVM
+OPTIONS_DEFINE=	PVM DOCS EXAMPLES
 PVM_DESC=	PVM support
 
-.include <bsd.port.options.mk>
-
-.if ${PORT_OPTIONS:MPVM}
-CONFIGURE_ENV+=		PVM_ROOT="${LOCALBASE}/lib/pvm" PVM_ARCH="FREEBSD"
-CONFIGURE_ARGS+=	--with-pvm
-BUILD_DEPENDS+=		pvm:${PORTSDIR}/net/pvm
-.endif
+PVM_CONFIGURE_ENV=	PVM_ROOT="${LOCALBASE}/lib/pvm" PVM_ARCH="FREEBSD"
+PVM_CONFIGURE_WITH=	pvm
+PVM_BUILD_DEPENDS=	pvm:${PORTSDIR}/net/pvm
 
 post-install:
-.if ${PORT_OPTIONS:MDOCS}
+	(cd ${WRKSRC}/documentation/man; for i in *.man; do \
+		${INSTALL_MAN} $$i ${STAGEDIR}${PREFIX}/man/man1/`echo $$i|${SED} 's/.man/.1/'`; \
+	done)
+
 	@${MKDIR} ${STAGEDIR}${DOCSDIR}
 	${INSTALL_DATA} ${DOCFILES:S,^,${WRKSRC}/,} ${STAGEDIR}${DOCSDIR}
-.endif
 
-.if ${PORT_OPTIONS:MEXAMPLES}
 	@${MKDIR} ${STAGEDIR}${EXAMPLESDIR}
 	${INSTALL_DATA} ${EXAMPLES:S,^,${WRKSRC}/tutorial/,} ${STAGEDIR}${EXAMPLESDIR}
-.endif
 
 .include <bsd.port.mk>

Modified: head/biology/hmmer/pkg-plist
==============================================================================
--- head/biology/hmmer/pkg-plist	Tue Jul 15 14:42:26 2014	(r361933)
+++ head/biology/hmmer/pkg-plist	Tue Jul 15 14:54:54 2014	(r361934)
@@ -10,6 +10,19 @@ bin/hmmsim
 bin/hmmstat
 bin/jackhmmer
 bin/phmmer
+man/man1/hmmalign.1.gz
+man/man1/hmmbuild.1.gz
+man/man1/hmmconvert.1.gz
+man/man1/hmmemit.1.gz
+man/man1/hmmer.1.gz
+man/man1/hmmfetch.1.gz
+man/man1/hmmpress.1.gz
+man/man1/hmmscan.1.gz
+man/man1/hmmsearch.1.gz
+man/man1/hmmsim.1.gz
+man/man1/hmmstat.1.gz
+man/man1/jackhmmer.1.gz
+man/man1/phmmer.1.gz
 %%PORTDOCS%%%%DOCSDIR%%/COPYRIGHT
 %%PORTDOCS%%%%DOCSDIR%%/INSTALL
 %%PORTDOCS%%%%DOCSDIR%%/LICENSE