svn commit: r350214 - head/biology/paml

[wen heping]

Should PORTEPOCH bumped here ?

wen

2014-04-05 18:56 GMT+08:00 Wen Heping <wen at freebsd.org>:
> Author: wen
> Date: Sat Apr  5 10:56:52 2014
> New Revision: 350214
> URL: http://svnweb.freebsd.org/changeset/ports/350214
> QAT: https://qat.redports.org/buildarchive/r350214/
>
> Log:
>   - Update to 4.8
>   - Reset maintainer to ports@
>
> Modified:
>   head/biology/paml/Makefile
>   head/biology/paml/distinfo
>   head/biology/paml/pkg-plist
>
> Modified: head/biology/paml/Makefile
> ==============================================================================
> --- head/biology/paml/Makefile  Sat Apr  5 10:42:18 2014        (r350213)
> +++ head/biology/paml/Makefile  Sat Apr  5 10:56:52 2014        (r350214)
> @@ -2,20 +2,21 @@
>  # $FreeBSD$
>
>  PORTNAME=      paml
> -PORTVERSION=   4.4c
> +PORTVERSION=   4.8
>  CATEGORIES=    biology
>  MASTER_SITES=  http://abacus.gene.ucl.ac.uk/software/
>  DISTNAME=      ${PORTNAME}${PORTVERSION}
> +EXTRACT_SUFX=  .tgz
>
> -MAINTAINER=    wen at FreeBSD.org
> +MAINTAINER=    ports at FreeBSD.org
>  COMMENT=       Phylogenetic Analysis by Maximum Likelihood (PAML)
>
>  USES=          gmake
> -WRKSRC=                ${WRKDIR}/${PORTNAME}44/src
> +WRKSRC=                ${WRKDIR}/${PORTNAME}${PORTVERSION}/src
>  MAKE_ARGS=     CC="${CC}" CFLAGS="${CFLAGS}"
>
>  BINARIES=      baseml basemlg chi2 codeml evolver pamp yn00
> -DOC_FILES=     MCMCtreeDoc.pdf pamlDOC.pdf pamlFAQs.pdf pamlHistory.txt
> +DOC_FILES=     pamlDOC.pdf pamlFAQs.pdf pamlHistory.txt
>
>  OPTIONS_DEFINE=        DOCS
>
> @@ -25,7 +26,7 @@ do-install:
>  .endfor
>         @${MKDIR} ${STAGEDIR}${DOCSDIR}
>  .for f in ${DOC_FILES}
> -       ${INSTALL_DATA} ${WRKDIR}/${PORTNAME}44/doc/${f} ${STAGEDIR}${DOCSDIR}
> +       ${INSTALL_DATA} ${WRKDIR}/${PORTNAME}${PORTVERSION}/doc/${f} ${STAGEDIR}${DOCSDIR}
>  .endfor
>
>  .include <bsd.port.mk>
>
> Modified: head/biology/paml/distinfo
> ==============================================================================
> --- head/biology/paml/distinfo  Sat Apr  5 10:42:18 2014        (r350213)
> +++ head/biology/paml/distinfo  Sat Apr  5 10:56:52 2014        (r350214)
> @@ -1,2 +1,2 @@
> -SHA256 (paml4.4c.tar.gz) = 08aad25b6b06a359d4f2f12a60ea601c95694864d5f29f7028f67b80890974d6
> -SIZE (paml4.4c.tar.gz) = 2891715
> +SHA256 (paml4.8.tgz) = 67498283308824cd5a3986db382bec275432e817f6719b8faf99fa2509f32781
> +SIZE (paml4.8.tgz) = 4835110
>
> Modified: head/biology/paml/pkg-plist
> ==============================================================================
> --- head/biology/paml/pkg-plist Sat Apr  5 10:42:18 2014        (r350213)
> +++ head/biology/paml/pkg-plist Sat Apr  5 10:56:52 2014        (r350214)
> @@ -6,7 +6,6 @@ bin/evolver
>  bin/pamp
>  bin/yn00
>  %%PORTDOCS%%%%DOCSDIR%%/pamlDOC.pdf
> -%%PORTDOCS%%%%DOCSDIR%%/MCMCtreeDoc.pdf
>  %%PORTDOCS%%%%DOCSDIR%%/pamlFAQs.pdf
>  %%PORTDOCS%%%%DOCSDIR%%/pamlHistory.txt
>  %%PORTDOCS%%@dirrm %%DOCSDIR%%
>