[Bug 190854] New port: biology/ncbi-blast
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Mon Oct 6 18:52:18 UTC 2014
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=190854
--- Comment #20 from John Marino <marino at FreeBSD.org> ---
(In reply to John Marino from comment #18)
> I'll bring this back too although I wonder how FreeBSD 8 will look it.
>
> X ${REINPLACE_CMD} \
> X -e "s|-D_THREAD_SAFE|-D_THREAD_SAFE -D__RUNETYPE_INTERNAL|g" \
> X ${WRKSRC}/src/build-system/configure
While ncbi-blast is building (takes a while, doesn't it?), I am wondering if
this is actually legit. The message in the comment is typically seen when
libraries from old system are mixed with new. Since you don't use poudriere,
I'm wondering if you have a mixed jail.
If this builds successfully, I'll have to rebuild it without this line to see
if it's really needed. I suspect it's not and your system was/is dirty.
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