ports/175737: [NEW PORT] math/mlpack: A scalable C++ machine learning library

Andriy Gapon avg at icyb.net.ua
Thu Jan 31 15:40:00 UTC 2013 

>Number:         175737
>Category:       ports
>Synopsis:       [NEW PORT] math/mlpack: A scalable C++ machine learning library
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          change-request
>Submitter-Id:   current-users
>Arrival-Date:   Thu Jan 31 15:40:00 UTC 2013
>Closed-Date:
>Last-Modified:
>Originator:     Andriy Gapon
>Release:        FreeBSD 10.0-CURRENT amd64
>Organization:
>Environment:
System: FreeBSD odyssey.starpoint.kiev.ua 10.0-CURRENT FreeBSD 10.0-CURRENT #60 r244281+da9de2d-dirty: Tue Dec 18 18:59:29 EET
>Description:
mlpack is a C++ machine learning library with emphasis on scalability,
speed, and ease-of-use. Its aim is to make machine learning possible
for novice users by means of a simple, consistent API, while
simultaneously exploiting C++ language features to provide maximum
performance and maximum flexibility for expert users.

WWW:	http://www.mlpack.org/about.html

Generated with FreeBSD Port Tools 0.99_6 (mode: new)
>How-To-Repeat:
>Fix:

--- .shar begins here ---
# This is a shell archive.  Save it in a file, remove anything before
# this line, and then unpack it by entering "sh file".  Note, it may
# create directories; files and directories will be owned by you and
# have default permissions.
#
# This archive contains:
#
#	mlpack
#	mlpack/pkg-descr
#	mlpack/Makefile
#	mlpack/files
#	mlpack/files/patch-CMake_allexec2man.sh
#	mlpack/files/patch-CMake_exec2man.sh
#	mlpack/distinfo
#	mlpack/pkg-plist
#
echo c - mlpack
mkdir -p mlpack > /dev/null 2>&1
echo x - mlpack/pkg-descr
sed 's/^X//' >mlpack/pkg-descr << '441089901a0e8a2748abcef837328648'
Xmlpack is a C++ machine learning library with emphasis on scalability,
Xspeed, and ease-of-use. Its aim is to make machine learning possible
Xfor novice users by means of a simple, consistent API, while
Xsimultaneously exploiting C++ language features to provide maximum
Xperformance and maximum flexibility for expert users.
X
XWWW:	http://www.mlpack.org/about.html
441089901a0e8a2748abcef837328648
echo x - mlpack/Makefile
sed 's/^X//' >mlpack/Makefile << 'bb7b145f28d7393e6ce30f643346c618'
X# Created by: Andriy Gapon <avg at icyb.net.ua>
X# $FreeBSD$
X
XPORTNAME=	mlpack
XPORTVERSION=	1.0.3
XCATEGORIES=	math
XMASTER_SITES=	http://www.mlpack.org/files/
X
XMAINTAINER=	avg at icyb.net.ua
XCOMMENT=	A scalable C++ machine learning library
X
XLICENSE=	LGPL3
X
XLIB_DEPENDS+=	boost_math_c99:${PORTSDIR}/devel/boost-libs
XLIB_DEPENDS+=	lapack:${PORTSDIR}/math/lapack
XLIB_DEPENDS+=	armadillo:${PORTSDIR}/math/armadillo
XLIB_DEPENDS+=	xml2:${PORTSDIR}/textproc/libxml2
XLIB_DEPENDS+=	execinfo:${PORTSDIR}/devel/libexecinfo
X
XUSE_CMAKE=	yes
XUSE_LDCONFIG=	yes
X
XCMAKE_OUTSOURCE=yes
XCMAKE_ARGS+=	-DDEBUG=OFF -DPROFILE=OFF
X
X.include <bsd.port.mk>
bb7b145f28d7393e6ce30f643346c618
echo c - mlpack/files
mkdir -p mlpack/files > /dev/null 2>&1
echo x - mlpack/files/patch-CMake_allexec2man.sh
sed 's/^X//' >mlpack/files/patch-CMake_allexec2man.sh << 'e51f01dd5c9bc566cce3d16108206463'
X--- CMake/allexec2man.sh.orig	2012-11-02 20:01:55.569125237 +0200
X+++ CMake/allexec2man.sh	2012-11-02 20:03:28.799125486 +0200
X@@ -1,4 +1,4 @@
X-#!/bin/bash
X+#!/bin/sh
X #
X # Convert all of the executables in this directory that are not tests to man
X # pages in the given directory.
X@@ -12,7 +12,7 @@ exec2man="$1"
X outdir="$2"
X 
X mkdir -p "$outdir"
X-for program in `find . -perm /u=x,g=x,o=x | \
X+for program in `find . -perm -u=x,g=x,o=x | \
X                 grep -v '[.]$' | \
X                 grep -v '_test$' | \
X                 sed 's|^./||'`; do
e51f01dd5c9bc566cce3d16108206463
echo x - mlpack/files/patch-CMake_exec2man.sh
sed 's/^X//' >mlpack/files/patch-CMake_exec2man.sh << '55f004d42edec168adb4e7bd9485454b'
X--- CMake/exec2man.sh.orig	2012-11-02 20:04:41.531125925 +0200
X+++ CMake/exec2man.sh	2012-11-02 20:04:47.534125437 +0200
X@@ -1,4 +1,4 @@
X-#!/bin/bash
X+#!/bin/sh
X # Convert the output of an MLPACK executable into a man page.  This assumes that
X # the CLI subsystem is used to output help, that the executable is properly
X # documented, and that the program is run in the directory that the executable
55f004d42edec168adb4e7bd9485454b
echo x - mlpack/distinfo
sed 's/^X//' >mlpack/distinfo << '523432a20f1e0e295e04c606757a2ef3'
XSHA256 (mlpack-1.0.3.tar.gz) = 4a001206456bce4598cdc15db51e07289d284ffb7445984a8128c580299aa9d0
XSIZE (mlpack-1.0.3.tar.gz) = 455658
523432a20f1e0e295e04c606757a2ef3
echo x - mlpack/pkg-plist
sed 's/^X//' >mlpack/pkg-plist << 'aef33b0bbf889a5d5d7f8868339586d8'
Xbin/allkfn
Xbin/allknn
Xbin/det
Xbin/emst
Xbin/gmm
Xbin/hmm_generate
Xbin/hmm_loglik
Xbin/hmm_train
Xbin/hmm_viterbi
Xbin/kernel_pca
Xbin/kmeans
Xbin/lars
Xbin/linear_regression
Xbin/local_coordinate_coding
Xbin/mvu
Xbin/nbc
Xbin/nca
Xbin/nmf
Xbin/pca
Xbin/radical
Xbin/range_search
Xbin/sparse_coding
Xinclude/mlpack/core.hpp
Xinclude/mlpack/core/arma_extend/arma_extend.hpp
Xinclude/mlpack/core/arma_extend/fn_ccov.hpp
Xinclude/mlpack/core/arma_extend/glue_ccov_meat.hpp
Xinclude/mlpack/core/arma_extend/glue_ccov_proto.hpp
Xinclude/mlpack/core/arma_extend/op_ccov_meat.hpp
Xinclude/mlpack/core/arma_extend/op_ccov_proto.hpp
Xinclude/mlpack/core/arma_extend/promote_type.hpp
Xinclude/mlpack/core/arma_extend/traits.hpp
Xinclude/mlpack/core/arma_extend/typedef.hpp
Xinclude/mlpack/core/data/load.hpp
Xinclude/mlpack/core/data/load_impl.hpp
Xinclude/mlpack/core/data/save.hpp
Xinclude/mlpack/core/data/save_impl.hpp
Xinclude/mlpack/core/dists/discrete_distribution.hpp
Xinclude/mlpack/core/dists/gaussian_distribution.hpp
Xinclude/mlpack/core/kernels/cosine_distance.hpp
Xinclude/mlpack/core/kernels/cosine_distance_impl.hpp
Xinclude/mlpack/core/kernels/epanechnikov_kernel.hpp
Xinclude/mlpack/core/kernels/epanechnikov_kernel_impl.hpp
Xinclude/mlpack/core/kernels/example_kernel.hpp
Xinclude/mlpack/core/kernels/gaussian_kernel.hpp
Xinclude/mlpack/core/kernels/hyperbolic_tangent_kernel.hpp
Xinclude/mlpack/core/kernels/laplacian_kernel.hpp
Xinclude/mlpack/core/kernels/linear_kernel.hpp
Xinclude/mlpack/core/kernels/polynomial_kernel.hpp
Xinclude/mlpack/core/kernels/pspectrum_string_kernel.hpp
Xinclude/mlpack/core/kernels/pspectrum_string_kernel_impl.hpp
Xinclude/mlpack/core/kernels/spherical_kernel.hpp
Xinclude/mlpack/core/kernels/triangular_kernel.hpp
Xinclude/mlpack/core/math/clamp.hpp
Xinclude/mlpack/core/math/lin_alg.hpp
Xinclude/mlpack/core/math/random.hpp
Xinclude/mlpack/core/math/range.hpp
Xinclude/mlpack/core/math/range_impl.hpp
Xinclude/mlpack/core/math/round.hpp
Xinclude/mlpack/core/metrics/lmetric.hpp
Xinclude/mlpack/core/metrics/lmetric_impl.hpp
Xinclude/mlpack/core/metrics/mahalanobis_distance.hpp
Xinclude/mlpack/core/metrics/mahalanobis_distance_impl.hpp
Xinclude/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian.hpp
Xinclude/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian_function.hpp
Xinclude/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian_function_impl.hpp
Xinclude/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian_impl.hpp
Xinclude/mlpack/core/optimizers/aug_lagrangian/aug_lagrangian_test_functions.hpp
Xinclude/mlpack/core/optimizers/lbfgs/lbfgs.hpp
Xinclude/mlpack/core/optimizers/lbfgs/lbfgs_impl.hpp
Xinclude/mlpack/core/optimizers/lbfgs/test_functions.hpp
Xinclude/mlpack/core/optimizers/lrsdp/lrsdp.hpp
Xinclude/mlpack/core/optimizers/lrsdp/lrsdp_impl.hpp
Xinclude/mlpack/core/tree/ballbound.hpp
Xinclude/mlpack/core/tree/ballbound_impl.hpp
Xinclude/mlpack/core/tree/binary_space_tree.hpp
Xinclude/mlpack/core/tree/binary_space_tree/binary_space_tree.hpp
Xinclude/mlpack/core/tree/binary_space_tree/binary_space_tree_impl.hpp
Xinclude/mlpack/core/tree/binary_space_tree/dual_tree_traverser.hpp
Xinclude/mlpack/core/tree/binary_space_tree/dual_tree_traverser_impl.hpp
Xinclude/mlpack/core/tree/binary_space_tree/single_tree_traverser.hpp
Xinclude/mlpack/core/tree/binary_space_tree/single_tree_traverser_impl.hpp
Xinclude/mlpack/core/tree/bounds.hpp
Xinclude/mlpack/core/tree/cover_tree.hpp
Xinclude/mlpack/core/tree/cover_tree/cover_tree.hpp
Xinclude/mlpack/core/tree/cover_tree/cover_tree_impl.hpp
Xinclude/mlpack/core/tree/cover_tree/dual_tree_traverser.hpp
Xinclude/mlpack/core/tree/cover_tree/dual_tree_traverser_impl.hpp
Xinclude/mlpack/core/tree/cover_tree/first_point_is_root.hpp
Xinclude/mlpack/core/tree/cover_tree/single_tree_traverser.hpp
Xinclude/mlpack/core/tree/cover_tree/single_tree_traverser_impl.hpp
Xinclude/mlpack/core/tree/hrectbound.hpp
Xinclude/mlpack/core/tree/hrectbound_impl.hpp
Xinclude/mlpack/core/tree/mrkd_statistic.hpp
Xinclude/mlpack/core/tree/periodichrectbound.hpp
Xinclude/mlpack/core/tree/periodichrectbound_impl.hpp
Xinclude/mlpack/core/tree/statistic.hpp
Xinclude/mlpack/core/util/cli.hpp
Xinclude/mlpack/core/util/cli_deleter.hpp
Xinclude/mlpack/core/util/cli_impl.hpp
Xinclude/mlpack/core/util/log.hpp
Xinclude/mlpack/core/util/nulloutstream.hpp
Xinclude/mlpack/core/util/option.hpp
Xinclude/mlpack/core/util/option_impl.hpp
Xinclude/mlpack/core/util/prefixedoutstream.hpp
Xinclude/mlpack/core/util/prefixedoutstream_impl.hpp
Xinclude/mlpack/core/util/save_restore_utility.hpp
Xinclude/mlpack/core/util/save_restore_utility_impl.hpp
Xinclude/mlpack/core/util/timers.hpp
Xinclude/mlpack/methods/det/dt_utils.hpp
Xinclude/mlpack/methods/det/dtree.hpp
Xinclude/mlpack/methods/emst/dtb.hpp
Xinclude/mlpack/methods/emst/dtb_impl.hpp
Xinclude/mlpack/methods/emst/edge_pair.hpp
Xinclude/mlpack/methods/emst/union_find.hpp
Xinclude/mlpack/methods/gmm/em_fit.hpp
Xinclude/mlpack/methods/gmm/em_fit_impl.hpp
Xinclude/mlpack/methods/gmm/gmm.hpp
Xinclude/mlpack/methods/gmm/gmm_impl.hpp
Xinclude/mlpack/methods/gmm/phi.hpp
Xinclude/mlpack/methods/hmm/hmm.hpp
Xinclude/mlpack/methods/hmm/hmm_impl.hpp
Xinclude/mlpack/methods/hmm/hmm_util.hpp
Xinclude/mlpack/methods/hmm/hmm_util_impl.hpp
Xinclude/mlpack/methods/kernel_pca/kernel_pca.hpp
Xinclude/mlpack/methods/kernel_pca/kernel_pca_impl.hpp
Xinclude/mlpack/methods/kmeans/allow_empty_clusters.hpp
Xinclude/mlpack/methods/kmeans/kmeans.hpp
Xinclude/mlpack/methods/kmeans/kmeans_impl.hpp
Xinclude/mlpack/methods/kmeans/max_variance_new_cluster.hpp
Xinclude/mlpack/methods/kmeans/max_variance_new_cluster_impl.hpp
Xinclude/mlpack/methods/kmeans/random_partition.hpp
Xinclude/mlpack/methods/lars/lars.hpp
Xinclude/mlpack/methods/linear_regression/linear_regression.hpp
Xinclude/mlpack/methods/local_coordinate_coding/lcc.hpp
Xinclude/mlpack/methods/local_coordinate_coding/lcc_impl.hpp
Xinclude/mlpack/methods/mvu/mvu.hpp
Xinclude/mlpack/methods/naive_bayes/naive_bayes_classifier.hpp
Xinclude/mlpack/methods/naive_bayes/naive_bayes_classifier_impl.hpp
Xinclude/mlpack/methods/nca/nca.hpp
Xinclude/mlpack/methods/nca/nca_impl.hpp
Xinclude/mlpack/methods/nca/nca_softmax_error_function.hpp
Xinclude/mlpack/methods/nca/nca_softmax_error_function_impl.hpp
Xinclude/mlpack/methods/neighbor_search/neighbor_search.hpp
Xinclude/mlpack/methods/neighbor_search/neighbor_search_impl.hpp
Xinclude/mlpack/methods/neighbor_search/neighbor_search_rules.hpp
Xinclude/mlpack/methods/neighbor_search/neighbor_search_rules_impl.hpp
Xinclude/mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort.hpp
Xinclude/mlpack/methods/neighbor_search/sort_policies/furthest_neighbor_sort_impl.hpp
Xinclude/mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort.hpp
Xinclude/mlpack/methods/neighbor_search/sort_policies/nearest_neighbor_sort_impl.hpp
Xinclude/mlpack/methods/neighbor_search/typedef.hpp
Xinclude/mlpack/methods/nmf/als_update_rules.hpp
Xinclude/mlpack/methods/nmf/mult_dist_update_rules.hpp
Xinclude/mlpack/methods/nmf/mult_div_update_rules.hpp
Xinclude/mlpack/methods/nmf/nmf.hpp
Xinclude/mlpack/methods/nmf/nmf_impl.hpp
Xinclude/mlpack/methods/nmf/random_acol_init.hpp
Xinclude/mlpack/methods/nmf/random_init.hpp
Xinclude/mlpack/methods/pca/pca.hpp
Xinclude/mlpack/methods/radical/radical.hpp
Xinclude/mlpack/methods/range_search/range_search.hpp
Xinclude/mlpack/methods/range_search/range_search_impl.hpp
Xinclude/mlpack/methods/sparse_coding/data_dependent_random_initializer.hpp
Xinclude/mlpack/methods/sparse_coding/nothing_initializer.hpp
Xinclude/mlpack/methods/sparse_coding/random_initializer.hpp
Xinclude/mlpack/methods/sparse_coding/sparse_coding.hpp
Xinclude/mlpack/methods/sparse_coding/sparse_coding_impl.hpp
Xinclude/mlpack/tests/old_boost_test_definitions.hpp
Xlib/libmlpack.so
Xlib/libmlpack.so.1
Xlib/libmlpack.so.1.0
X%%PORTDOCS%%@dirrm %%DOCSDIR%%
X at dirrm include/mlpack/tests
X at dirrm include/mlpack/methods/sparse_coding
X at dirrm include/mlpack/methods/range_search
X at dirrm include/mlpack/methods/radical
X at dirrm include/mlpack/methods/pca
X at dirrm include/mlpack/methods/nmf
X at dirrm include/mlpack/methods/neighbor_search/sort_policies
X at dirrm include/mlpack/methods/neighbor_search
X at dirrm include/mlpack/methods/nca
X at dirrm include/mlpack/methods/naive_bayes
X at dirrm include/mlpack/methods/mvu
X at dirrm include/mlpack/methods/local_coordinate_coding
X at dirrm include/mlpack/methods/linear_regression
X at dirrm include/mlpack/methods/lars
X at dirrm include/mlpack/methods/kmeans
X at dirrm include/mlpack/methods/kernel_pca
X at dirrm include/mlpack/methods/hmm
X at dirrm include/mlpack/methods/gmm
X at dirrm include/mlpack/methods/emst
X at dirrm include/mlpack/methods/det
X at dirrm include/mlpack/methods
X at dirrm include/mlpack/core/util
X at dirrm include/mlpack/core/tree/cover_tree
X at dirrm include/mlpack/core/tree/binary_space_tree
X at dirrm include/mlpack/core/tree
X at dirrm include/mlpack/core/optimizers/lrsdp
X at dirrm include/mlpack/core/optimizers/lbfgs
X at dirrm include/mlpack/core/optimizers/aug_lagrangian
X at dirrm include/mlpack/core/optimizers
X at dirrm include/mlpack/core/metrics
X at dirrm include/mlpack/core/math
X at dirrm include/mlpack/core/kernels
X at dirrm include/mlpack/core/dists
X at dirrm include/mlpack/core/data
X at dirrm include/mlpack/core/arma_extend
X at dirrm include/mlpack/core
X at dirrm include/mlpack
X%%PORTDOCS%%@exec mkdir -p %D/%%DOCSDIR%%
aef33b0bbf889a5d5d7f8868339586d8
exit
--- .shar ends here ---

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>Audit-Trail:
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