ports/176326: french/aster does not build on amd64/clang or ia64/gcc
Anton Shterenlikht
mexas at bristol.ac.uk
Thu Feb 21 16:10:02 UTC 2013
>Number: 176326
>Category: ports
>Synopsis: french/aster does not build on amd64/clang or ia64/gcc
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: sw-bug
>Submitter-Id: current-users
>Arrival-Date: Thu Feb 21 16:10:01 UTC 2013
>Closed-Date:
>Last-Modified:
>Originator: Anton Shterenlikht
>Release: FreeBSD 10.0-CURRENT amd64
>Organization:
University of Bristol
>Environment:
System: FreeBSD zzz 10.0-CURRENT FreeBSD 10.0-CURRENT #2 r246552: Fri Feb 15 20:41:10 GMT 2013 root at zzz:/usr/obj/usr/src/sys/MINKY amd64
>Description:
On amd64/clang I'm building french/aster.
I get this failure:
Script started on Thu Feb 21 15:52:35 2013
command: make -C /usr/ports/french/aster/ deinstall-all clean all
===> Deinstalling for french/aster
===> french/aster not installed, skipping
===> Cleaning for fr-aster-10.6.0.3_1
===> License GPLv2 accepted by the user
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/sbin/pkg - found
===> Extracting for fr-aster-10.6.0.3_1
===> License GPLv2 accepted by the user
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/sbin/pkg - found
=> SHA256 Checksum OK for aster-full-src-10.6.0-3.noarch.tar.gz.
===> Patching for fr-aster-10.6.0.3_1
===> Applying FreeBSD patches for fr-aster-10.6.0.3_1
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/aster/ASTK/ASTK_SERV - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/bin/bash - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/bin/python2.7 - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/lib/libscotch.a - found
===> fr-aster-10.6.0.3_1 depends on executable: gcc46 - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/bin/as - found
===> fr-aster-10.6.0.3_1 depends on executable: bison - found
===> fr-aster-10.6.0.3_1 depends on shared library: tcl85 - found
===> fr-aster-10.6.0.3_1 depends on shared library: tk85 - found
===> fr-aster-10.6.0.3_1 depends on shared library: hdf5.7 - found
===> fr-aster-10.6.0.3_1 depends on shared library: med.4 - found
===> fr-aster-10.6.0.3_1 depends on shared library: atlas.2 - found
===> Configuring for fr-aster-10.6.0.3_1
/usr/bin/sed -i "" -e 's|PREFER_SHARED_LIBS=False|PREFER_SHARED_LIBS=True|' /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
/usr/bin/sed -i "" -e 's|/opt/aster|/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir|' /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
/usr/bin/sed -i "" -e 's|?ASTER_ROOT?|/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir|' /usr/ports/french/aster/work/aster-full-src-10.6.0/products.py
/usr/bin/sed -i "" -e "s|'gfortran'|'gfortran46'|g" /usr/ports/french/aster/work/aster-full-src-10.6.0/check_compilers.py
/usr/bin/sed -i "" -e 's|/bin/bash|/usr/local/bin/bash|' /usr/ports/french/aster/work/aster-full-src-10.6.0/products_data.py
/usr/bin/sed -i "" -e "s|cfg\['BLASLIB'\]|cfg['BLASLIB'], cfg['ATLASLIB']|" /usr/ports/french/aster/work/aster-full-src-10.6.0/products.py
echo "_install_hdf5 = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_med = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_tcl = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_tk = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_Pmw = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_Numeric = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_gmsh = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_gmsh2 = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_gibi = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_grace = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "XMGRACE = 'xmgrace'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_homard = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_eficas = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_astk = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_astk_serv = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_metis = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_mumps = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_omniORB = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_omniORBpy = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_pylotage = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_crpcrs = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_aster_Linux = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "_install_scotch = False" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "OPT_ENV = 'verbose=True'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "HOME_SCOTCH = '/usr/local'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "HOME_METIS = '/usr/local'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "CC='gcc46'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "CXX='g++46'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "CXXLIB = '-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "LD='gfortran46'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "F90='/usr/local/bin/gfortran46'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "OTHERLIB='-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "SYSLIB='-pthread -lz'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "HOME_MPI = ''" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "HOME_ZMAT = ''" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "HOME_HDF='/usr/local'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "HOME_MED='/usr/local'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "HOME_TCL_TK='/usr/local'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "ATLASLIB='atlas'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "BLASLIB='ptf77blas'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "LAPACKLIB='lapack'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "GZIP='/usr/bin/gzip'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "SHELL_EXECUTION='/usr/local/bin/bash'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "TERMINAL='xterm'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "EDITOR='vi'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "LDFLAGS='-v -Wl,-rpath=/usr/local/lib/gcc46'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
# -O2 causes failure in compilation of the elements -see GCC Bug 51267
echo "FFLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "FFLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "F90FLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "F90FLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "CFLAGS='-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
echo "CFLAGS_DBG='-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg
/usr/bin/sed -i "" -e '/should_continue()/d' /usr/ports/french/aster/work/aster-full-src-10.6.0/check_compilers.py
/usr/bin/sed -i "" -e '/should_continue()/d' /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.py
Listing /usr/ports/french/aster/work/aster-full-src-10.6.0 ...
Listing /usr/ports/french/aster/work/aster-full-src-10.6.0/SRC ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/__pkginfo__.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/as_setup.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/check_compilers.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/check_compilers_src.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/check_popen_thread.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/mprint.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/products.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/products_data.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/products_versions.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.py ...
Listing /usr/ports/french/aster/work/aster-full-src-10.6.0 ...
Listing /usr/ports/french/aster/work/aster-full-src-10.6.0/SRC ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/__pkginfo__.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/as_setup.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/check_compilers.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/check_compilers_src.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/check_popen_thread.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/mprint.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/products.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/products_data.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/products_versions.py ...
Compiling /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.py ...
(cd /usr/ports/french/aster/work/aster-full-src-10.6.0 && /usr/local/bin/python2.7 setup.pyo test | tee config.log)
--------------------------------------------------------------------------------
Code_Aster Setup version 11.0-1
Copyright (c) 2001-2011 EDF R&D - http://www.code-aster.org
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Command line :
/usr/local/bin/python2.7 setup.pyo test
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Reading config file '/usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg'...
ATLASLIB (from cfg) : 'atlas'
HOME_SCOTCH (from cfg) : '/usr/local'
F90FLAGS_DBG (from cfg) : '-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
HOME_MPI (from cfg) : ''
_install_Pmw (from cfg) : False
CXXLIB (from cfg) : '-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'
USE_LOCATE (from cfg) : False
CC (from cfg) : 'gcc46'
_install_gmsh (from cfg) : False
XMGRACE (from cfg) : 'xmgrace'
OPT_ENV (from cfg) : 'verbose=True'
LD (from cfg) : 'gfortran46'
SYSLIB (from cfg) : '-pthread -lz'
_install_astk_serv (from cfg) : False
ASTER_ROOT (from cfg) : '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir'
_install_tcl (from cfg) : False
_install_omniORBpy (from cfg) : False
F90 (from cfg) : '/usr/local/bin/gfortran46'
EDITOR (from cfg) : 'vi'
LDFLAGS (from cfg) : '-v -Wl,-rpath=/usr/local/lib/gcc46'
_install_grace (from cfg) : False
_install_eficas (from cfg) : False
FFLAGS (from cfg) : '-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
_install_metis (from cfg) : False
_install_scotch (from cfg) : False
_install_med (from cfg) : False
_install_aster_Linux (from cfg) : False
F90FLAGS (from cfg) : '-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
_install_gibi (from cfg) : False
_install_omniORB (from cfg) : False
_install_homard (from cfg) : False
_install_hdf5 (from cfg) : False
HOME_TCL_TK (from cfg) : '/usr/local'
_install_Numeric (from cfg) : False
LAPACKLIB (from cfg) : 'lapack'
_install_astk (from cfg) : False
_install_pylotage (from cfg) : False
HOME_MED (from cfg) : '/usr/local'
OTHERLIB (from cfg) : '-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'
CFLAGS_DBG (from cfg) : '-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
_install_gmsh2 (from cfg) : False
PREFER_SHARED_LIBS (from cfg) : True
CXX (from cfg) : 'g++46'
HOME_METIS (from cfg) : '/usr/local'
PREFER_COMPILER (from cfg) : 'GNU'
HOME_ZMAT (from cfg) : ''
TERMINAL (from cfg) : 'xterm'
HOME_HDF (from cfg) : '/usr/local'
_install_tk (from cfg) : False
BLASLIB (from cfg) : 'ptf77blas'
MAXDEPTH (from cfg) : 1
CFLAGS (from cfg) : '-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
_install_mumps (from cfg) : False
GZIP (from cfg) : '/usr/bin/gzip'
SHELL_EXECUTION (from cfg) : '/usr/local/bin/bash'
FFLAGS_DBG (from cfg) : '-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
_install_crpcrs (from cfg) : False
--------------------------------------------------------------------------------
Installation on :
FreeBSD zzz 10.0-CURRENT FreeBSD 10.0-CURRENT #2 r246552: Fri Feb 15 20:41:10 GMT 2013 root at zzz:/usr/obj/usr/src/sys/MINKY amd64
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Checking for max command length... 32768
Checking for file... /usr/bin/file
Checking for ar... /usr/bin/ar
Checking for architecture... FreeBSD / posix / x86_64
Checking for number of processors (core)... 1
Checking for Code_Aster platform type... FREEBSD
Checking for bash or ksh or zsh... /usr/local/bin/bash (previously set)
Checking for Python version... 2.7.3
Checking for numpy... yes
Checking for numpy version... 1.6.2
Checking for numpy/arrayobject.h... /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h
Checking for PyQt4 (for eficasQt)... yes
Checking for PyQt4.QtAssistant module (for eficasQt, optionnal)... yes
Checking if gcc46 is GCC... no C version 2011
Checking for gcc... /usr/bin/gcc
Checking for /usr/bin/gcc configured installation directory... /usr/libexec, /usr/bin
--------------------------------------------------------------------------------
Checking for default compiler (for all products)...
Checking for GNU compilers...
Checking for CC from setup.cfg... gcc46
Checking for CXX from setup.cfg... g++46
Checking for gfortran46... /usr/local/bin/gfortran46
Checking for compiler version... GNU Fortran (FreeBSD Ports Collection) 4.6.3
Checking for F90 from setup.cfg... /usr/local/bin/gfortran46
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for liblapack.so... /usr/local/lib/liblapack.so
Checking for libblas.so... /usr/local/lib/libblas.so
Checking for F77 (/usr/local/bin/gfortran46) is gfortran... yes
Checking for F77 (/usr/local/bin/gfortran46) and F90 (/usr/local/bin/gfortran46) support '-fopenmp' option... yes
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for libg2c.so... no
Checking for libg2c.a... no
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for libgfortran46.so... no
Checking for libgfortran46.a... no
Checking for LD from setup.cfg... gfortran46
Checking for CC (gcc46) supports '-fno-stack-protector' option... yes
Checking for fortran program if the gcc bug #51267 is fixed... no
Checking for F77 (/usr/local/bin/gfortran46) supports '-fno-tree-dse' option... yes
Checking for F90 (/usr/local/bin/gfortran46) supports '-fno-tree-dse' option... yes
Checking for fortran program if the gcc bug #51267 is fixed with --no-tree-dse option... yes
Checking for CFLAGS from setup.cfg... -c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include
Checking for FFLAGS from setup.cfg... -c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8
Checking for F90FLAGS from setup.cfg... -c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include
Checking for CFLAGS_DBG from setup.cfg... -c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include
Checking for FFLAGS_DBG from setup.cfg... -c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8
Checking for F90FLAGS_DBG from setup.cfg... -c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include
Checking for LDFLAGS from setup.cfg... -v -Wl,-rpath=/usr/local/lib/gcc46
Checking for C/fortran program using blas/lapack... no
---------- ERROR MESSAGE ----------
RESULTS : 10 / '01/01/2010' / 1 / 10.000000 / 0.000000
EXIT_CODE=4
-------------------------------------------------------------------------------
WARNING :
The C/fortran test program calling blas and lapack subroutines failed.
Reasons :
- unable to find suitable C/fortran compilers
- blas/lapack libraries (or required by them) missing
- incorrect compilation options
Nevertheless the compilation of Code_Aster may work !
If it failed, you must help the setup by setting CC, CFLAGS, MATHLIB...
-------------------------------------------------------------------------------
Checking for GNU compilers... yes
Checking for global values... ,
Compiler variables (set as environment variables):
export CC='gcc46'
export CFLAGS='-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
export CFLAGS_DBG='-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
export CFLAGS_OPENMP='-fopenmp'
export CXX='g++46'
export CXXLIB='-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'
export DEFINED='FREEBSD'
export F77='/usr/local/bin/gfortran46'
export F90='/usr/local/bin/gfortran46'
export F90FLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
export F90FLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
export F90FLAGS_OPENMP=' -fopenmp'
export FFLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
export FFLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
export FFLAGS_OPENMP=' -fopenmp'
export LD='gfortran46'
export LDFLAGS='-v -Wl,-rpath=/usr/local/lib/gcc46'
export LDFLAGS_OPENMP=' -fopenmp'
export MATHLIB='-L/usr/local/lib -llapack -L/usr/local/lib -lblas'
export OTHERLIB='-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'
# Environment settings :
verbose=True
--------------------------------------------------------------------------------
Checking for ps... /bin/ps
Checking for xterm... /usr/local/bin/xterm
Checking for nedit... no
Checking for geany... no
Checking for gvim... no
Checking for gedit... no
Checking for kwrite... no
Checking for xemacs... no
Checking for emacs... no
Checking for xedit... no
Checking for vi... /usr/bin/vi
Checking for gdb... /usr/bin/gdb
Checking for ddd... no
Checking for flex... /usr/local/bin/flex
Checking for ranlib... /usr/local/bin/ranlib
Checking for bison... /usr/local/bin/bison
--------------------------------------------------------------------------------
Checking for host name... zzz
Checking for network domain name... (empty)
Checking for full qualified network name... zzz
Checking for xmgrace or grace... xmgrace (previously set)
Checking for grace... /usr/local/bin/grace
Checking for Grace version < 5.99... version is 5.1.23 : ok. Do not need compile grace from sources.
--------------------------------------------------------------------------------
Checking for dependencies and required variables for '__main__'... [ OK ]
--------------------------------------------------------------------------------
Checking for dependencies and required variables for '__cfg__'... [ OK ]
Filling cache... [ OK ]
Stop here !
Settings are saved in setup.cache. Remove it if you change something.
---------------- Debug ------------------
/bin/cat /usr/ports/french/aster/work/aster-full-src-10.6.0/setup.log
--------------------------------------------------------------------------------
Code_Aster Setup version 11.0-1
Copyright (c) 2001-2011 EDF R&D - http://www.code-aster.org
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Command line :
/usr/local/bin/python2.7 setup.pyo test
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Reading config file '/usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg'...
ATLASLIB (from cfg) : 'atlas'
HOME_SCOTCH (from cfg) : '/usr/local'
F90FLAGS_DBG (from cfg) : '-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
HOME_MPI (from cfg) : ''
_install_Pmw (from cfg) : False
CXXLIB (from cfg) : '-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'
USE_LOCATE (from cfg) : False
CC (from cfg) : 'gcc46'
_install_gmsh (from cfg) : False
XMGRACE (from cfg) : 'xmgrace'
OPT_ENV (from cfg) : 'verbose=True'
LD (from cfg) : 'gfortran46'
SYSLIB (from cfg) : '-pthread -lz'
_install_astk_serv (from cfg) : False
ASTER_ROOT (from cfg) : '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir'
_install_tcl (from cfg) : False
_install_omniORBpy (from cfg) : False
F90 (from cfg) : '/usr/local/bin/gfortran46'
EDITOR (from cfg) : 'vi'
LDFLAGS (from cfg) : '-v -Wl,-rpath=/usr/local/lib/gcc46'
_install_grace (from cfg) : False
_install_eficas (from cfg) : False
FFLAGS (from cfg) : '-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
_install_metis (from cfg) : False
_install_scotch (from cfg) : False
_install_med (from cfg) : False
_install_aster_Linux (from cfg) : False
F90FLAGS (from cfg) : '-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
_install_gibi (from cfg) : False
_install_omniORB (from cfg) : False
_install_homard (from cfg) : False
_install_hdf5 (from cfg) : False
HOME_TCL_TK (from cfg) : '/usr/local'
_install_Numeric (from cfg) : False
LAPACKLIB (from cfg) : 'lapack'
_install_astk (from cfg) : False
_install_pylotage (from cfg) : False
HOME_MED (from cfg) : '/usr/local'
OTHERLIB (from cfg) : '-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'
CFLAGS_DBG (from cfg) : '-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
_install_gmsh2 (from cfg) : False
PREFER_SHARED_LIBS (from cfg) : True
CXX (from cfg) : 'g++46'
HOME_METIS (from cfg) : '/usr/local'
PREFER_COMPILER (from cfg) : 'GNU'
HOME_ZMAT (from cfg) : ''
TERMINAL (from cfg) : 'xterm'
HOME_HDF (from cfg) : '/usr/local'
_install_tk (from cfg) : False
BLASLIB (from cfg) : 'ptf77blas'
MAXDEPTH (from cfg) : 1
CFLAGS (from cfg) : '-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
_install_mumps (from cfg) : False
GZIP (from cfg) : '/usr/bin/gzip'
SHELL_EXECUTION (from cfg) : '/usr/local/bin/bash'
FFLAGS_DBG (from cfg) : '-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
_install_crpcrs (from cfg) : False
--------------------------------------------------------------------------------
Installation on :
FreeBSD zzz 10.0-CURRENT FreeBSD 10.0-CURRENT #2 r246552: Fri Feb 15 20:41:10 GMT 2013 root at zzz:/usr/obj/usr/src/sys/MINKY amd64
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Checking for max command length... 32768
Checking for file... /usr/bin/file
Checking for ar... /usr/bin/ar
Checking for architecture... FreeBSD / posix / x86_64
Checking for number of processors (core)... 1
Checking for Code_Aster platform type... FREEBSD
Checking for bash or ksh or zsh... /usr/local/bin/bash (previously set)
Checking for Python version... 2.7.3
Checking for numpy... yes
Checking for numpy version... 1.6.2
Checking for numpy/arrayobject.h... /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h
Checking for PyQt4 (for eficasQt)... yes
Checking for PyQt4.QtAssistant module (for eficasQt, optionnal)... yes
Checking if gcc46 is GCC... no C version 2011
Checking for gcc... /usr/bin/gcc
Checking for /usr/bin/gcc configured installation directory... /usr/libexec, /usr/bin
--------------------------------------------------------------------------------
Checking for default compiler (for all products)...
Checking for GNU compilers...
Checking for CC from setup.cfg... gcc46
Checking for CXX from setup.cfg... g++46
Checking for gfortran46... /usr/local/bin/gfortran46
Checking for compiler version... GNU Fortran (FreeBSD Ports Collection) 4.6.3
Checking for F90 from setup.cfg... /usr/local/bin/gfortran46
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for liblapack.so... /usr/local/lib/liblapack.so
Checking for libblas.so... /usr/local/lib/libblas.so
Checking for F77 (/usr/local/bin/gfortran46) is gfortran... yes
Checking for F77 (/usr/local/bin/gfortran46) and F90 (/usr/local/bin/gfortran46) support '-fopenmp' option... yes
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for libg2c.so... no
Checking for libg2c.a... no
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for libgfortran46.so... no
Checking for libgfortran46.a... no
Checking for LD from setup.cfg... gfortran46
Checking for CC (gcc46) supports '-fno-stack-protector' option... yes
Checking for fortran program if the gcc bug #51267 is fixed... no
Checking for F77 (/usr/local/bin/gfortran46) supports '-fno-tree-dse' option... yes
Checking for F90 (/usr/local/bin/gfortran46) supports '-fno-tree-dse' option... yes
Checking for fortran program if the gcc bug #51267 is fixed with --no-tree-dse option... yes
Checking for CFLAGS from setup.cfg... -c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include
Checking for FFLAGS from setup.cfg... -c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8
Checking for F90FLAGS from setup.cfg... -c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include
Checking for CFLAGS_DBG from setup.cfg... -c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include
Checking for FFLAGS_DBG from setup.cfg... -c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8
Checking for F90FLAGS_DBG from setup.cfg... -c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include
Checking for LDFLAGS from setup.cfg... -v -Wl,-rpath=/usr/local/lib/gcc46
Checking for C/fortran program using blas/lapack... no
---------- ERROR MESSAGE ----------
RESULTS : 10 / '01/01/2010' / 1 / 10.000000 / 0.000000
EXIT_CODE=4
-------------------------------------------------------------------------------
WARNING :
The C/fortran test program calling blas and lapack subroutines failed.
Reasons :
- unable to find suitable C/fortran compilers
- blas/lapack libraries (or required by them) missing
- incorrect compilation options
Nevertheless the compilation of Code_Aster may work !
If it failed, you must help the setup by setting CC, CFLAGS, MATHLIB...
-------------------------------------------------------------------------------
Checking for GNU compilers... yes
Checking for global values... ,
Compiler variables (set as environment variables):
export CC='gcc46'
export CFLAGS='-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
export CFLAGS_DBG='-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
export CFLAGS_OPENMP='-fopenmp'
export CXX='g++46'
export CXXLIB='-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'
export DEFINED='FREEBSD'
export F77='/usr/local/bin/gfortran46'
export F90='/usr/local/bin/gfortran46'
export F90FLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
export F90FLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
export F90FLAGS_OPENMP=' -fopenmp'
export FFLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
export FFLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
export FFLAGS_OPENMP=' -fopenmp'
export LD='gfortran46'
export LDFLAGS='-v -Wl,-rpath=/usr/local/lib/gcc46'
export LDFLAGS_OPENMP=' -fopenmp'
export MATHLIB='-L/usr/local/lib -llapack -L/usr/local/lib -lblas'
export OTHERLIB='-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'
# Environment settings :
verbose=True
--------------------------------------------------------------------------------
Checking for ps... /bin/ps
Checking for xterm... /usr/local/bin/xterm
Checking for nedit... no
Checking for geany... no
Checking for gvim... no
Checking for gedit... no
Checking for kwrite... no
Checking for xemacs... no
Checking for emacs... no
Checking for xedit... no
Checking for vi... /usr/bin/vi
Checking for gdb... /usr/bin/gdb
Checking for ddd... no
Checking for flex... /usr/local/bin/flex
Checking for ranlib... /usr/local/bin/ranlib
Checking for bison... /usr/local/bin/bison
--------------------------------------------------------------------------------
Checking for host name... zzz
Checking for network domain name... (empty)
Checking for full qualified network name... zzz
Checking for xmgrace or grace... xmgrace (previously set)
Checking for grace... /usr/local/bin/grace
Checking for Grace version < 5.99... version is 5.1.23 : ok. Do not need compile grace from sources.
--------------------------------------------------------------------------------
Checking for dependencies and required variables for '__main__'... [ OK ]
--------------------------------------------------------------------------------
Checking for dependencies and required variables for '__cfg__'... [ OK ]
Filling cache... [ OK ]
------------ Fin debug ------------------
/bin/mkdir -p /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/etc/
/bin/cp -R /usr/local/aster/etc/codeaster /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/etc/
echo "#?vers : VVV?" >> /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/etc/codeaster/aster
/bin/cp -R /usr/local/aster/ASTK/ASTK_SERV/bin /usr/local/aster/ASTK/ASTK_SERV/asrun /usr/local/aster/ASTK/ASTK_SERV/share /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/
/usr/bin/sed -i "" -e 's|/usr/local/aster|/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir|' /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/bin/as_run
/usr/bin/sed -i "" -e 's|/usr/local/aster/ASTK/ASTK_SERV|/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir|g' -e 's|/usr/local/aster|/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir|g' /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/etc/codeaster/profile.sh
/usr/bin/sed -i "" -e 's|/usr/local/aster/ASTK/ASTK_SERV|/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir|g' -e 's|/usr/local/aster|/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir|g' /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/asrun/installation.py
===> Building for fr-aster-10.6.0.3_1
(cd /usr/ports/french/aster/work/aster-full-src-10.6.0 && /usr/local/bin/python2.7 setup.pyo install aster | tee /usr/ports/french/aster/work/aster-full-src-10.6.0/build.log)
--------------------------------------------------------------------------------
Code_Aster Setup version 11.0-1
Copyright (c) 2001-2011 EDF R&D - http://www.code-aster.org
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Command line :
/usr/local/bin/python2.7 setup.pyo install aster
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Reading config file '/usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cfg'...
ATLASLIB (from cfg) : 'atlas'
HOME_SCOTCH (from cfg) : '/usr/local'
F90FLAGS_DBG (from cfg) : '-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
HOME_MPI (from cfg) : ''
_install_Pmw (from cfg) : False
CXXLIB (from cfg) : '-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'
USE_LOCATE (from cfg) : False
CC (from cfg) : 'gcc46'
_install_gmsh (from cfg) : False
XMGRACE (from cfg) : 'xmgrace'
OPT_ENV (from cfg) : 'verbose=True'
LD (from cfg) : 'gfortran46'
SYSLIB (from cfg) : '-pthread -lz'
_install_astk_serv (from cfg) : False
ASTER_ROOT (from cfg) : '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir'
_install_tcl (from cfg) : False
_install_omniORBpy (from cfg) : False
F90 (from cfg) : '/usr/local/bin/gfortran46'
EDITOR (from cfg) : 'vi'
LDFLAGS (from cfg) : '-v -Wl,-rpath=/usr/local/lib/gcc46'
_install_grace (from cfg) : False
_install_eficas (from cfg) : False
FFLAGS (from cfg) : '-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
_install_metis (from cfg) : False
_install_scotch (from cfg) : False
_install_med (from cfg) : False
_install_aster_Linux (from cfg) : False
F90FLAGS (from cfg) : '-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
_install_gibi (from cfg) : False
_install_omniORB (from cfg) : False
_install_homard (from cfg) : False
_install_hdf5 (from cfg) : False
HOME_TCL_TK (from cfg) : '/usr/local'
_install_Numeric (from cfg) : False
LAPACKLIB (from cfg) : 'lapack'
_install_astk (from cfg) : False
_install_pylotage (from cfg) : False
HOME_MED (from cfg) : '/usr/local'
OTHERLIB (from cfg) : '-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'
CFLAGS_DBG (from cfg) : '-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
_install_gmsh2 (from cfg) : False
PREFER_SHARED_LIBS (from cfg) : True
CXX (from cfg) : 'g++46'
HOME_METIS (from cfg) : '/usr/local'
PREFER_COMPILER (from cfg) : 'GNU'
HOME_ZMAT (from cfg) : ''
TERMINAL (from cfg) : 'xterm'
HOME_HDF (from cfg) : '/usr/local'
_install_tk (from cfg) : False
BLASLIB (from cfg) : 'ptf77blas'
MAXDEPTH (from cfg) : 1
CFLAGS (from cfg) : '-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
_install_mumps (from cfg) : False
GZIP (from cfg) : '/usr/bin/gzip'
SHELL_EXECUTION (from cfg) : '/usr/local/bin/bash'
FFLAGS_DBG (from cfg) : '-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
_install_crpcrs (from cfg) : False
--------------------------------------------------------------------------------
Reading cache file '/usr/ports/french/aster/work/aster-full-src-10.6.0/setup.cache'...
ARCH (from cache) : 'x86_64'
ASTER_ROOT (from cache) : '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir'
ASTER_VERSION (from cache) : 'STA10.6'
ASTER_VERSLABEL (from cache) : 'stable'
ATLASLIB (from cache) : 'atlas'
BLASLIB (from cache) : 'ptf77blas'
CC (from cache) : 'gcc46'
CFLAGS (from cache) : '-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
CFLAGS_DBG (from cache) : '-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
CFLAGS_OPENMP (from cache) : '-fopenmp'
CXX (from cache) : 'g++46'
CXXFLAGS (from cache) : ''
CXXFLAGS_DBG (from cache) : ''
CXXLIB (from cache) : '-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'
DEBUGGER_COMMAND (from cache) : ''
DEBUGGER_COMMAND_POST (from cache) : '/usr/bin/gdb -batch --command=@D @E @C'
DEFINED (from cache) : 'FREEBSD'
DOMAIN_NAME (from cache) : ''
EDITOR (from cache) : 'vi'
F77 (from cache) : '/usr/local/bin/gfortran46'
F90 (from cache) : '/usr/local/bin/gfortran46'
F90FLAGS (from cache) : '-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
F90FLAGS_DBG (from cache) : '-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
F90FLAGS_I8 (from cache) : ''
F90FLAGS_OPENMP (from cache) : ' -fopenmp'
FFLAGS (from cache) : '-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
FFLAGS_DBG (from cache) : '-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
FFLAGS_I8 (from cache) : ''
FFLAGS_OPENMP (from cache) : ' -fopenmp'
FLEX (from cache) : '/usr/local/bin/flex'
FULL_SERVER_NAME (from cache) : 'zzz'
GRACEBAT (from cache) : '/usr/local/bin/grace'
GZIP (from cache) : '/usr/bin/gzip'
HOME_CRPCRS (from cache) : '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/outils/CRPCRS'
HOME_HDF (from cache) : '/usr/local'
HOME_MED (from cache) : '/usr/local'
HOME_METIS (from cache) : '/usr/local'
HOME_MPI (from cache) : ''
HOME_MUMPS (from cache) : ''
HOME_NUMPY (from cache) : '/usr/local/lib/python2.7/site-packages'
HOME_PYTHON (from cache) : '/usr/local'
HOME_SCOTCH (from cache) : '/usr/local'
HOME_TCL_TK (from cache) : '/usr/local'
HOME_ZMAT (from cache) : ''
IFDEF (from cache) : 'FREEBSD'
INCLUDE_MUMPS (from cache) : 'include_mumps-4.9.2'
LAPACKLIB (from cache) : 'lapack'
LD (from cache) : 'gfortran46'
LDFLAGS (from cache) : '-v -Wl,-rpath=/usr/local/lib/gcc46'
LDFLAGS_OPENMP (from cache) : ' -fopenmp'
MATHLIB (from cache) : '-L/usr/local/lib -llapack -L/usr/local/lib -lblas'
MAXCMDLEN (from cache) : 32768
MAXDEPTH (from cache) : 1
MPIRUN (from cache) : 'mpirun'
MULTITHREADING (from cache) : True
NODE (from cache) : 'zzz'
OPT_ENV (from cache) : 'verbose=True'
OTHERLIB (from cache) : '-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'
PREFER_COMPILER (from cache) : 'GNU'
PREFER_SHARED_LIBS (from cache) : True
PS_COMMAND (from cache) : '/bin/ps'
PS_COMMAND_CPU (from cache) : '/bin/ps -e --width=512 -ocputime -ocommand'
PS_COMMAND_PID (from cache) : '/bin/ps -e --width=512 -opid -ocommand'
PYTHONLIB (from cache) : '-L/usr/local/lib -L/usr/local/lib/python2.7/config -lpython2.7'
PYTHONPATH (from cache) : '/usr/ports/french/aster/work/aster-full-src-10.6.0:/usr/local/lib/python2.7/site-packages'
PYTHON_EXE (from cache) : '/usr/local/bin/python2.7'
RANLIB (from cache) : '/usr/local/bin/ranlib'
SERVER_NAME (from cache) : 'zzz'
SHELL_EXECUTION (from cache) : '/usr/local/bin/bash'
SOURCEDIR (from cache) : '/usr/ports/french/aster/work/aster-full-src-10.6.0/SRC'
SYSLIB (from cache) : '-pthread -lz'
TERMINAL (from cache) : 'xterm'
TOOLS_DIR (from cache) : '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/outils'
USE_LOCATE (from cache) : False
USE_NUMPY (from cache) : True
XMGRACE (from cache) : 'xmgrace'
YACC (from cache) : '/usr/local/bin/bison -y'
_install_Numeric (from cache) : False
_install_Pmw (from cache) : False
_install_aster_Linux (from cache) : False
_install_astk (from cache) : False
_install_astk_serv (from cache) : False
_install_crpcrs (from cache) : False
_install_eficas (from cache) : False
_install_gibi (from cache) : False
_install_gmsh (from cache) : False
_install_gmsh2 (from cache) : False
_install_grace (from cache) : False
_install_hdf5 (from cache) : False
_install_homard (from cache) : False
_install_med (from cache) : False
_install_metis (from cache) : False
_install_mumps (from cache) : False
_install_omniORB (from cache) : False
_install_omniORBpy (from cache) : False
_install_pylotage (from cache) : False
_install_scotch (from cache) : False
_install_tcl (from cache) : False
_install_tk (from cache) : False
gcc (from cache) : '/usr/bin/gcc'
--------------------------------------------------------------------------------
Installation on :
FreeBSD zzz 10.0-CURRENT FreeBSD 10.0-CURRENT #2 r246552: Fri Feb 15 20:41:10 GMT 2013 root at zzz:/usr/obj/usr/src/sys/MINKY amd64
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
Checking for max command length... 32768
Checking for file... /usr/bin/file
Checking for ar... /usr/bin/ar
Checking for architecture... FreeBSD / posix / x86_64
Checking for number of processors (core)... 1
Checking for Code_Aster platform type... FREEBSD
Checking for bash or ksh or zsh... /usr/local/bin/bash (previously set)
Checking for Python version... 2.7.3
Checking for numpy... yes
Checking for numpy version... 1.6.2
Checking for numpy/arrayobject.h... /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h
Checking for PyQt4 (for eficasQt)... yes
Checking for PyQt4.QtAssistant module (for eficasQt, optionnal)... yes
Checking if gcc46 is GCC... no C version 2011
Checking for gcc... /usr/bin/gcc (previously set)
Checking for /usr/bin/gcc configured installation directory... /usr/libexec, /usr/bin
--------------------------------------------------------------------------------
Checking for default compiler (for all products)...
Checking for GNU compilers...
Checking for CC from setup.cfg... gcc46
Checking for CXX from setup.cfg... g++46
Checking for F77 from setup.cfg... /usr/local/bin/gfortran46
Checking for F90 from setup.cfg... /usr/local/bin/gfortran46
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for MATHLIB from setup.cfg... -L/usr/local/lib -llapack -L/usr/local/lib -lblas
Checking for F77 (/usr/local/bin/gfortran46) is gfortran... yes
Checking for F77 (/usr/local/bin/gfortran46) and F90 (/usr/local/bin/gfortran46) support '-fopenmp' option... yes
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for MATHLIB from setup.cfg... -L/usr/local/lib -llapack -L/usr/local/lib -lblas
Checking for CXXLIB from setup.cfg... -L/usr/local/lib/gcc46 -lstdc++ -lsupc++
Checking for OTHERLIB from setup.cfg... -Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz
Checking for MATHLIB from setup.cfg... -L/usr/local/lib -llapack -L/usr/local/lib -lblas
Checking for LD from setup.cfg... gfortran46
Checking for CC (gcc46) supports '-fno-stack-protector' option... yes
Checking for fortran program if the gcc bug #51267 is fixed... no
Checking for F77 (/usr/local/bin/gfortran46) supports '-fno-tree-dse' option... yes
Checking for F90 (/usr/local/bin/gfortran46) supports '-fno-tree-dse' option... yes
Checking for fortran program if the gcc bug #51267 is fixed with --no-tree-dse option... yes
Checking for CFLAGS from setup.cfg... -c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include
Checking for FFLAGS from setup.cfg... -c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8
Checking for F90FLAGS from setup.cfg... -c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include
Checking for CFLAGS_DBG from setup.cfg... -c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include
Checking for FFLAGS_DBG from setup.cfg... -c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8
Checking for F90FLAGS_DBG from setup.cfg... -c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include
Checking for LDFLAGS from setup.cfg... -v -Wl,-rpath=/usr/local/lib/gcc46
Checking for C/fortran program using blas/lapack... no
---------- ERROR MESSAGE ----------
RESULTS : 10 / '01/01/2010' / 1 / 10.000000 / 0.000000
EXIT_CODE=4
-------------------------------------------------------------------------------
WARNING :
The C/fortran test program calling blas and lapack subroutines failed.
Reasons :
- unable to find suitable C/fortran compilers
- blas/lapack libraries (or required by them) missing
- incorrect compilation options
Nevertheless the compilation of Code_Aster may work !
If it failed, you must help the setup by setting CC, CFLAGS, MATHLIB...
-------------------------------------------------------------------------------
Checking for GNU compilers... yes
Checking for global values...
Compiler variables (set as environment variables):
export CC='gcc46'
export CFLAGS='-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
export CFLAGS_DBG='-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
export CFLAGS_OPENMP='-fopenmp'
export CXX='g++46'
export CXXLIB='-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'
export DEFINED='FREEBSD'
export F77='/usr/local/bin/gfortran46'
export F90='/usr/local/bin/gfortran46'
export F90FLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
export F90FLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
export F90FLAGS_OPENMP=' -fopenmp'
export FFLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
export FFLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
export FFLAGS_OPENMP=' -fopenmp'
export LD='gfortran46'
export LDFLAGS='-v -Wl,-rpath=/usr/local/lib/gcc46'
export LDFLAGS_OPENMP=' -fopenmp'
export MATHLIB='-L/usr/local/lib -llapack -L/usr/local/lib -lblas'
export OTHERLIB='-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'
# Environment settings :
verbose=True
--------------------------------------------------------------------------------
Checking for ps... /bin/ps (previously set)
Checking for xterm... /usr/local/bin/xterm
Checking for nedit... no
Checking for geany... no
Checking for gvim... no
Checking for gedit... no
Checking for kwrite... no
Checking for xemacs... no
Checking for emacs... no
Checking for xedit... no
Checking for vi... /usr/bin/vi
Checking for gdb... /usr/bin/gdb
Checking for ddd... no
Checking for flex... /usr/local/bin/flex (previously set)
Checking for ranlib... /usr/local/bin/ranlib (previously set)
Checking for bison... /usr/local/bin/bison -y (previously set)
--------------------------------------------------------------------------------
Checking for host name... zzz
Checking for network domain name... (empty)
Checking for full qualified network name... zzz
--------------------------------------------------------------------------------
Checking for dependencies and required variables for '__main__'... [ OK ]
--------------------------------------------------------------------------------
Checking for dependencies and required variables for '__cfg__'... [ OK ]
Filling cache... [ OK ]
--------------------------------------------------------------------------------
Check if found values seem correct. If not you can change them using 'setup.cfg'.
--------------------------------------------------------------------------------
Compiler variables for aster (set as environment variables):
export CC='gcc46'
export CFLAGS='-c -O0 -pipe -Wl,-rpath=/usr/local/lib/gcc46 -fno-strict-aliasing -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
export CFLAGS_DBG='-c -g -O -pipe -fno-tree-dse -DH5_USE_16_API -DLINUX64 -I/usr/local/include'
export CFLAGS_OPENMP='-fopenmp'
export CXX='g++46'
export CXXLIB='-L/usr/local/lib/gcc46 -lstdc++ -lsupc++'
export DEFINED='FREEBSD'
export F77='/usr/local/bin/gfortran46'
export F90='/usr/local/bin/gfortran46'
export F90FLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
export F90FLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8 -I/usr/local/include'
export F90FLAGS_OPENMP=' -fopenmp'
export FFLAGS='-c -O -Wl,-rpath=/usr/local/lib/gcc46 -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
export FFLAGS_DBG='-c -g -O -fno-tree-dse -DLINUX64 -fdefault-integer-8 -fdefault-real-8'
export FFLAGS_OPENMP=' -fopenmp'
export LD='gfortran46'
export LDFLAGS='-v -Wl,-rpath=/usr/local/lib/gcc46'
export LDFLAGS_OPENMP=' -fopenmp'
export MATHLIB='-L/usr/local/lib -llapack -L/usr/local/lib -lblas'
export OTHERLIB='-Xlinker -export-dynamic -pthread -lutil -lm -lz -lgfortran -pthread -lz'
# Environment settings :
verbose=True
--------------------------------------------------------------------------------
Checking for dependencies and required variables for 'aster'... [ OK ]
Checking for Python.h... /usr/local/include/python2.7/Python.h
Checking for numpy/arrayobject.h... /usr/local/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h
Checking for libhdf5.so... /usr/local/lib/libhdf5.so
Checking prefix for HOME_HDF (/usr/local/lib/libhdf5.so)... adjust to /usr/local
Checking for hdf5.h... /usr/local/include/hdf5.h
Checking for libmed.so... /usr/local/lib/libmed.so
Checking prefix for HOME_MED (/usr/local/lib/libmed.so)... adjust to /usr/local
Checking for med.h... /usr/local/include/med.h
Checking for libesmumps.so... no
Checking for libesmumps.a... /usr/local/lib/libesmumps.a
Checking for libscotch.so... no
Checking for libscotch.a... /usr/local/lib/libscotch.a
Checking for libscotcherr.so... no
Checking for libscotcherr.a... /usr/local/lib/libscotcherr.a
Checking for scotchf.h... /usr/local/include/scotchf.h
--------------------------------------------------------------------------------
Installation of : aster 10.6
Code_Aster finite element method solver.
Archive filename : aster-src-10.6.0
Destination : /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir
Working directory : /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir
--------------------------------------------------------------------------------
Filling cache... [ OK ]
Checking permissions... [ OK ]
>How-To-Repeat:
>Fix:
>Release-Note:
>Audit-Trail:
>Unformatted:
>>> Extraction <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir'
Extracting aster-src-10.6.0-1.noarch.tar.gz... [ OK ]
--- 18564 files extracted
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir'
different /proc/pid/status => change /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6/bibc/utilitai/mempid.c
>>> Installation <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir'
Command line : rm -f stable ; ln -sf STA10.6 stable
installing aster to /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir...
Command output :
EXIT_COMMAND_8154_00000067=0
installing aster to /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir...
[ OK ]
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir'
>>> Modifying pre-configured files <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
Setting profile.sh [ OK ]
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
>>> Modifying pre-configured files <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
modifying config.txt [ OK ]
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
>>> Modifying pre-configured files <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
modifying astout.export [ OK ]
modifying forma01a.export [ OK ]
modifying Makefile.asrun [ OK ]
modifying Makefile.package [ OK ]
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
>>> Modifying pre-configured files <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/etc/codeaster'
modifying aster [ OK ]
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/etc/codeaster'
>>> Modifying pre-configured files <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/etc/codeaster'
modifying aster [ OK ]
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/etc/codeaster'
>>> Installation <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
Command line : ln -sf Makefile.asrun Makefile
installing aster to /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir...
Command output :
EXIT_COMMAND_8154_00000068=0
installing aster to /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir...
[ OK ]
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
>>> Installation <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
leaving directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
>>> Building the product <<<
entering directory '/usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6'
Command line : /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/bin/as_run --make --vers=STA10.6
compiling aster...
Command output :
EXIT_COMMAND_8154_00000069=1
compiling aster... [FAILED]
Exit code : 1
EXIT_COMMAND_8154_00000069=1
*** Exception raised : error during compilation
--------------------------------------------------------------------------------
SUMMARY OF INSTALLATION
--------------------------------------------------------------------------------
Installation of : aster 10.6
Destination : /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir
Elapsed time : 49.44 s
*** Exception <class 'as_setup.SetupMakeError'> raised : error during compilation
See detailed traceback in the logfile
[FAILED]
Exit code : 4
Installation of : Code_Aster + 1 of its prerequisites
Destination : /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir
Elapsed time : 52.26 s
[ OK ]
/bin/chmod go-x /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6/materiau/A42_REF_A.NOMI
Script done on Thu Feb 21 15:53:51 2013
If I ignore this error and proceed with the installation,
I get:
Script started on Thu Feb 21 15:55:31 2013
command: make -C /usr/ports/french/aster/ install
===> Installing for fr-aster-10.6.0.3_1
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/lib/python2.7/site-packages/Gnuplot - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/bin/onmetis.exe - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/bin/bash - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/aster/ASTK/ASTK_SERV - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/bin/python2.7 - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/aster/ASTK/ASTK_CLIENT - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/apps/eficas - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/bin/gmsh - found
===> fr-aster-10.6.0.3_1 depends on executable: xmgrace - found
===> fr-aster-10.6.0.3_1 depends on file: /usr/local/lib/python2.7/site-packages/numpy/core/numeric.py - found
===> fr-aster-10.6.0.3_1 depends on executable: gcc46 - found
===> fr-aster-10.6.0.3_1 depends on shared library: tcl85 - found
===> fr-aster-10.6.0.3_1 depends on shared library: tk85 - found
===> fr-aster-10.6.0.3_1 depends on shared library: hdf5.7 - found
===> fr-aster-10.6.0.3_1 depends on shared library: med.4 - found
===> fr-aster-10.6.0.3_1 depends on shared library: atlas.2 - found
===> Generating temporary packing list
===> Checking if french/aster already installed
/bin/mkdir -p /usr/local/aster/outils /usr/local/aster/STA10.6 /usr/local/aster/bin
install -s -o root -g wheel -m 555 /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6/asteru /usr/local/aster/STA10.6
install: /usr/ports/french/aster/work/aster-full-src-10.6.0/instdir/STA10.6/asteru: No such file or directory
*** [do-install] Error code 71
Stop in /usr/ports/french/aster.
*** [/usr/ports/french/aster/work/.install_done.aster._usr_local] Error code 1
Stop in /usr/ports/french/aster.
Script done on Thu Feb 21 15:55:32 2013
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