ports/148264: math/R: Error: segfault from C stack overflow

David Wolfskill david at catwhisker.org
Wed Jun 30 23:39:36 UTC 2010


I believe this update may be of interest.

After applying the following patch:

diff -ru R/Makefile R/Makefile
--- R/Makefile	2010-05-31 05:31:45.000000000 -0700
+++ R/Makefile	2010-06-30 15:09:30.000000000 -0700
@@ -11,8 +11,7 @@
 .else
 PORTNAME=	R
 .endif
-PORTVERSION=	2.11.0
-PORTREVISION=	1
+PORTVERSION=	2.11.1
 CATEGORIES=	math lang
 MASTER_SITES=	http://cran.r-project.org/src/base/R-2/ \
 		ftp://cran.r-project.org/pub/R/src/base/R-2/ \
diff -ru R/distinfo R/distinfo
--- R/distinfo	2010-04-27 12:51:30.000000000 -0700
+++ R/distinfo	2010-06-30 15:12:30.000000000 -0700
@@ -1,3 +1,3 @@
-MD5 (R-2.11.0.tar.gz) = c6c1e866299f533617750889c729bfb3
-SHA256 (R-2.11.0.tar.gz) = 9b2a1769cdf21ad00500cbc0a1f7e09c872681d2ca0ea592e7692f15ff980a43
-SIZE (R-2.11.0.tar.gz) = 19779908
+MD5 (R-2.11.1.tar.gz) = 7421108ade3e9223263394b9bbe277ce
+SHA256 (R-2.11.1.tar.gz) = 48c1b96426f5b588763652b0b633cadccf410bae34300c22fd40524662bc23bb
+SIZE (R-2.11.1.tar.gz) = 19729300


and rebuilding math/R, using the just-built R 2.11.1 did, in fact, avoid
the "Error: segfault from C stack overflow" condition; I was able to
create all of the plots without incident.

There may be other issues with 2.11.1, or there may be issues with
environments other than FreeBSD/i386 stable/7; I have not tested that.
But the above patch does appear to be sufficient to update the port from
2.11.0_1 to 2.11.1, and the resulting executable and associated
libraries appear to work.

Peace,
david
-- 
David H. Wolfskill				david at catwhisker.org
Depriving a girl or boy of an opportunity for education is evil.

See http://www.catwhisker.org/~david/publickey.gpg for my public key.
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