ports/135856: [NEW PORT]biology/rubygem-bioruby:Integrated environment for Bioinformatics written in Ruby
Wen Heping
wenheping at gmail.com
Sat Jun 20 05:10:03 UTC 2009
>Number: 135856
>Category: ports
>Synopsis: [NEW PORT]biology/rubygem-bioruby:Integrated environment for Bioinformatics written in Ruby
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: change-request
>Submitter-Id: current-users
>Arrival-Date: Sat Jun 20 05:10:02 UTC 2009
>Closed-Date:
>Last-Modified:
>Originator: Wen Heping
>Release: FreeBSD 8.0-CURRENT
>Organization:
ChangAn Middle School
>Environment:
FreeBSD fb8.wenjing.com 8.0-CURRENT FreeBSD 8.0-CURRENT #0: Sun Mar 22 22:12:06 CST 2009 root at fb8.wenjing.com:/usr/obj/usr/src/sys/GENERIC i386
>Description:
BioRuby project aims to implement integrated environment for
Bioinformatics by using Ruby.
WWW: http://bioruby.org/
( This port actually is the same ruby application as biology/ruby-bio,
shall we repocopy it from biology/ruby-bio ? )
>How-To-Repeat:
>Fix:
Patch attached with submission follows:
# This is a shell archive. Save it in a file, remove anything before
# this line, and then unpack it by entering "sh file". Note, it may
# create directories; files and directories will be owned by you and
# have default permissions.
#
# This archive contains:
#
# rubygem-bioruby
# rubygem-bioruby/Makefile
# rubygem-bioruby/distinfo
# rubygem-bioruby/pkg-descr
#
echo c - rubygem-bioruby
mkdir -p rubygem-bioruby > /dev/null 2>&1
echo x - rubygem-bioruby/Makefile
sed 's/^X//' >rubygem-bioruby/Makefile << '530bb826a2696c4ebf934c5c36589c09'
X# New ports collection makefile for: rubygem-bioruby
X# Date created: 20 June, 2009
X# Whom: Wen Heping <wenheping at gmail.com>
X#
X# $FreeBSD$
X#
X
XPORTNAME= bioruby
XPORTVERSION= 1.3.0
XCATEGORIES= devel rubygems
XMASTER_SITES= RF
XDISTNAME= bio-${PORTVERSION}
X
XMAINTAINER= wenheping at gmail.com
XCOMMENT= Integrated environment for Bioinformatics written in Ruby
X
XPLIST_FILES= bin/bioruby \
X bin/br_biofetch.rb \
X bin/br_bioflat.rb \
X bin/br_biogetseq.rb \
X bin/br_pmfetch.rb
X
XUSE_RUBY= yes
XUSE_RUBYGEMS= yes
XRUBYGEM_AUTOPLIST= yes
XGEM_NAME= ${DISTNAME}
X
X.include <bsd.port.mk>
530bb826a2696c4ebf934c5c36589c09
echo x - rubygem-bioruby/distinfo
sed 's/^X//' >rubygem-bioruby/distinfo << '3614f29ee230b76aefbc16d0b067511c'
XMD5 (rubygem/bio-1.3.0.gem) = 23d28f07311b769265ba4a764716cd13
XSHA256 (rubygem/bio-1.3.0.gem) = e2441f967e1dfbfff6eb57d81e148976290f3ce78b234a71d88a94c7343644cf
XSIZE (rubygem/bio-1.3.0.gem) = 914944
3614f29ee230b76aefbc16d0b067511c
echo x - rubygem-bioruby/pkg-descr
sed 's/^X//' >rubygem-bioruby/pkg-descr << 'b49810fb549b553b81e8bd98fe34c74e'
XBioRuby project aims to implement integrated environment for
XBioinformatics by using Ruby.
X
XWWW: http://bioruby.org/
b49810fb549b553b81e8bd98fe34c74e
exit
>Release-Note:
>Audit-Trail:
>Unformatted:
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