ports/104508: [maintainer-update] update biology/fasta3
Fernan Aguero
fernan at iib.unsam.edu.ar
Wed Oct 18 01:50:35 UTC 2006
>Number: 104508
>Category: ports
>Synopsis: [maintainer-update] update biology/fasta3
>Confidential: no
>Severity: non-critical
>Priority: low
>Responsible: freebsd-ports-bugs
>State: open
>Quarter:
>Keywords:
>Date-Required:
>Class: maintainer-update
>Submitter-Id: current-users
>Arrival-Date: Wed Oct 18 01:50:17 GMT 2006
>Closed-Date:
>Last-Modified:
>Originator: Fernan Aguero
>Release: FreeBSD 6.0-RELEASE-p4 i386
>Organization:
IIB-UNSAM
>Environment:
System: FreeBSD omega.iib.unsam.edu.ar 6.0-RELEASE-p4 FreeBSD 6.0-RELEASE-p4 #0: Wed Jan 25 12:43:39 ART 2006 fernan at omega.iib.unsam.edu.ar:/usr/obj/usr/src/sys/OMEGA i386
>Description:
update biology/fasta3 to latest version.
>How-To-Repeat:
>Fix:
--- fasta3.diff begins here ---
diff -ruN /usr/ports/biology/fasta3/Makefile fasta3/Makefile
--- /usr/ports/biology/fasta3/Makefile Wed Jun 14 13:50:53 2006
+++ fasta3/Makefile Tue Oct 17 10:03:15 2006
@@ -7,7 +7,7 @@
#
PORTNAME= fasta3
-PORTVERSION= 34.t25.d9
+PORTVERSION= 34.t26.b3
CATEGORIES= biology
MASTER_SITES= ftp://ftp.virginia.edu/pub/fasta/ \
${MASTER_SITE_LOCAL}
diff -ruN /usr/ports/biology/fasta3/distinfo fasta3/distinfo
--- /usr/ports/biology/fasta3/distinfo Wed Jun 14 13:50:53 2006
+++ fasta3/distinfo Tue Oct 17 10:04:40 2006
@@ -1,3 +1,3 @@
-MD5 (fasta34t25d9.shar.Z) = fbd066cfa81a8448cb1ae72fd214a308
-SHA256 (fasta34t25d9.shar.Z) = 06c51dce0c5f7ecd466db161d17221e7be1c27b6a2b5121bf2b2db9754a4884a
-SIZE (fasta34t25d9.shar.Z) = 820485
+MD5 (fasta34t26b3.shar.Z) = b188f55f2b484e631f3bdb6590b49310
+SHA256 (fasta34t26b3.shar.Z) = 05b24e1f3e4df8a54e59a08540b1c368822989921fd40056087729d293625365
+SIZE (fasta34t26b3.shar.Z) = 896133
diff -ruN /usr/ports/biology/fasta3/pkg-plist fasta3/pkg-plist
--- /usr/ports/biology/fasta3/pkg-plist Tue May 16 10:22:18 2006
+++ fasta3/pkg-plist Tue Oct 17 10:15:30 2006
@@ -63,6 +63,7 @@
%%EXAMPLESDIR%%/musplfm.aa
%%EXAMPLESDIR%%/mwkw.aa
%%EXAMPLESDIR%%/mwrtc1.aa
+%%EXAMPLESDIR%%/myosin_bp.aa
%%EXAMPLESDIR%%/n0.aa
%%EXAMPLESDIR%%/n1.aa
%%EXAMPLESDIR%%/n2.aa
@@ -73,6 +74,7 @@
%%EXAMPLESDIR%%/oohu.aa
%%EXAMPLESDIR%%/prio_atepa.aa
%%EXAMPLESDIR%%/qrhuld.aa
+%%EXAMPLESDIR%%/titin_hum.aa
%%EXAMPLESDIR%%/xurt8c.aa
%%EXAMPLESDIR%%/xurtg.aa
%%EXAMPLESDIR%%/mgstm1.lc
@@ -84,6 +86,7 @@
%%EXAMPLESDIR%%/humgstd.seq
%%EXAMPLESDIR%%/mgstm1.seq
%%EXAMPLESDIR%%/mgtt2_x.seq
+%%EXAMPLESDIR%%/titin_hum.seq
%%DATADIR%%/blosum45.mat
%%DATADIR%%/blosum50.mat
%%DATADIR%%/blosum62.mat
--- fasta3.diff ends here ---
>Release-Note:
>Audit-Trail:
>Unformatted:
More information about the freebsd-ports-bugs
mailing list