ports/89976: unbreak biology/seaview

[Fernan Aguero]

>Number:         89976
>Category:       ports
>Synopsis:       unbreak biology/seaview
>Confidential:   no
>Severity:       serious
>Priority:       medium
>Responsible:    freebsd-ports-bugs
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          maintainer-update
>Submitter-Id:   current-users
>Arrival-Date:   Mon Dec 05 14:40:05 GMT 2005
>Closed-Date:
>Last-Modified:
>Originator:     Fernan Aguero
>Release:        FreeBSD 4.10-RELEASE i386
>Organization:
IIB-UNSAM
>Environment:

FreeBSD pi.iib.unsam.edu.ar 4.10-RELEASE FreeBSD 4.10-RELEASE #0: Wed May 26 12:56:43 ART 2004 fernan at pi.iib.unsam.edu.ar:/usr/obj/usr/src/sys/PI  i386

	
>Description:
	
	
	Update biology/seaview to the latest version.

	Unbreak (checksum mismatch problem due to upstream distfile name
	being constant through version updates)

	CC goes to Kris, the pointy hat owner because of:
	[ports-i386 at FreeBSD.org: seaview-2004.12.16 failed on i386 6]
	
>How-To-Repeat:
	
	
>Fix:

	



--- seaview.diff begins here ---
diff -ruN /usr/ports/biology/seaview/Makefile seaview/Makefile
--- /usr/ports/biology/seaview/Makefile	Sun Dec  4 09:56:09 2005
+++ seaview/Makefile	Mon Dec  5 08:35:30 2005
@@ -7,7 +7,7 @@
 #
 
 PORTNAME=	seaview
-PORTVERSION=	2004.12.16
+PORTVERSION=	2005.13.07
 CATEGORIES=	biology
 MASTER_SITES=	ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/
 DISTNAME=	${PORTNAME}
@@ -18,8 +18,6 @@
 COMMENT=	Multiple DNA/protein sequence alignment editor
 
 LIB_DEPENDS=	fltk.1:${PORTSDIR}/x11-toolkits/fltk
-
-BROKEN=		Size mismatch
 
 USE_X_PREFIX=	yes
 NO_WRKSUBDIR=	yes
diff -ruN /usr/ports/biology/seaview/distinfo seaview/distinfo
--- /usr/ports/biology/seaview/distinfo	Mon Dec 20 06:02:41 2004
+++ seaview/distinfo	Mon Dec  5 07:54:17 2005
@@ -1,2 +1,2 @@
-MD5 (seaview-2004.12.16/seaview.tar) = 2786e787fb45f4d7f065aeed3c4a7903
-SIZE (seaview-2004.12.16/seaview.tar) = 561152
+MD5 (seaview-2005.13.07/seaview.tar) = 0971b3485351f6a1f56a7b56ead2359c
+SIZE (seaview-2005.13.07/seaview.tar) = 595968
diff -ruN /usr/ports/biology/seaview/files/patch-Makefile seaview/files/patch-Makefile
--- /usr/ports/biology/seaview/files/patch-Makefile	Wed Dec 31 21:00:00 1969
+++ seaview/files/patch-Makefile	Mon Dec  5 08:31:20 2005
@@ -0,0 +1,25 @@
+--- Makefile.orig	Wed Apr  6 05:54:30 2005
++++ Makefile	Mon Dec  5 08:31:05 2005
+@@ -1,18 +1,15 @@
+-FLTK = ../fltk
+-PDF = ../PDFlib-Lite-6.0.1/libs/pdflib
+-X11 = /usr/X11R6
+ CXX = g++
+ 
+-CFLAGS  = -Dunix  -U__APPLE__  -c $(OPT) -I$(FLTK) -I$(PDF) -I$(X11)/include 
++CFLAGS  = -Dunix -c $(OPT) -I$(X11BASE)/include -I$(LOCALBASE)/include
+ 
+ 
+ OBJECTS = seaview.o pdf.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o chooser_plus.o resource.o nexus.o old_file_chooser.o
+ 
+ 
+ seaview : $(OBJECTS) 
+-	$(CXX) -o $@ $(OBJECTS) -L$(FLTK)/lib -lfltk \
+-             -Xlinker -Bstatic -L$(PDF)/.libs -lpdf -Xlinker -Bdynamic \
+-             -L$(X11)/lib -lX11 -lm 
++	$(CXX) -o $@ $(OBJECTS) -L$(LOCALBASE)/lib -lfltk \
++             -Xlinker -Bstatic -lpdf -Xlinker -Bdynamic \
++             -L$(X11BASE)/lib -lX11 -lm 
+ 	strip $@
+ 
+ 
--- seaview.diff ends here ---

>Release-Note:
>Audit-Trail:
>Unformatted: