pkgng libpcre problems after installing mdbtools

Mon Aug 12 19:44:30 UTC 2013

Hello :-)

I have installed mdbtools from new binary rollout from exonetric. This
required upgrade of libpcre (and pkg -> 1.1.4). Updating libpcre made
all other packages to stop working and I had to create a link by hand
to make them alive again (ln -s /usr/local/lib/libpcre.so.3
/usr/local/lib/libpcre.so.1). I guess this is a bug, because when
package wants to update a library, it shoud leave old library on place
by default or ask to update all other packages that depends on it. At
the moment pkg simply replaces a dynamic library and breaks all other
packages :-(

# pkg install mdbtools
Updating repository catalogue
The following 10 packages will be installed:

	Upgrading libiconv: 1.14 -> 1.14_1
	Upgrading perl: 5.14.2_2 -> 5.14.4
	Upgrading pcre: 8.31_1 -> 8.33
	Upgrading libffi: 3.0.9 -> 3.0.13
	Upgrading gettext: 0.18.1.1 -> 0.18.1.1_1
	Upgrading python27: 2.7.3_3 -> 2.7.5_1
	Upgrading glib: 2.28.8_4 -> 2.34.3
	Upgrading gamin: 0.1.10_4 -> 0.1.10_5
	Upgrading gio-fam-backend: 2.28.8_1 -> 2.34.3
	Installing mdbtools: 0.5_14

The installation will require 5 MB more space

30 MB to be downloaded

Proceed with installing packages [y/N]: y
pkg: cached package libiconv-1.14_1: checksum mismatch, fetching from remote
libiconv-1.14_1.txz

    100%  593KB 593.4KB/s 593.4KB/s   00:01
perl-5.14.4.txz

    100%   13MB   1.4MB/s   1.5MB/s   00:09
pcre-8.33.txz

    100%  895KB 895.3KB/s 895.3KB/s   00:01
pkg: cached package libffi-3.0.13: checksum mismatch, fetching from remote
libffi-3.0.13.txz

    100%   34KB  34.0KB/s  34.0KB/s   00:00
pkg: cached package gettext-0.18.1.1_1: checksum mismatch, fetching from remote
gettext-0.18.1.1_1.txz

    100% 4979KB   1.6MB/s   2.0MB/s   00:03
python27-2.7.5_1.txz

    100% 9546KB   2.3MB/s   2.8MB/s   00:04
pkg: cached package glib-2.34.3: checksum mismatch, fetching from remote
glib-2.34.3.txz

    100% 2470KB   1.2MB/s   2.2MB/s   00:02
pkg: cached package gamin-0.1.10_5: checksum mismatch, fetching from remote
gamin-0.1.10_5.txz

    100%   79KB  78.7KB/s  78.7KB/s   00:00
pkg: cached package gio-fam-backend-2.34.3: checksum mismatch,
fetching from remote
gio-fam-backend-2.34.3.txz

    100% 9312     9.1KB/s   9.1KB/s   00:00
mdbtools-0.5_14.txz

    100%   86KB  86.0KB/s  86.0KB/s   00:00
Checking integrity... done
[1/10] Upgrading libiconv from 1.14 to 1.14_1... done
[2/10] Upgrading perl from 5.14.2_2 to 5.14.4...pkg:
rmdir(/usr/local/lib/perl5/5.14.2/perl/man/): Directory not empty
pkg: rmdir(/usr/local/lib/perl5/5.14.2/perl/): Directory not empty
pkg: rmdir(/usr/local/lib/perl5/5.14.2/man/man3/): Directory not empty
pkg: rmdir(/usr/local/lib/perl5/5.14.2/man/): Directory not empty
pkg: rmdir(/usr/local/lib/perl5/5.14.2/): Directory not empty
Removing stale symlinks from /usr/bin...
    Removing /usr/bin/perl
    Removing /usr/bin/perl5
Done.
Creating various symlinks in /usr/bin...
    Symlinking /usr/local/bin/perl5.14.4 to /usr/bin/perl
    Symlinking /usr/local/bin/perl5.14.4 to /usr/bin/perl5
Done.
Cleaning up /etc/make.conf... Done.
Spamming /etc/make.conf... Done.
 done
[3/10] Upgrading pcre from 8.31_1 to 8.33... done
[4/10] Upgrading libffi from 3.0.9 to 3.0.13... done
[5/10] Upgrading gettext from 0.18.1.1 to 0.18.1.1_1... done
[6/10] Upgrading python27 from 2.7.3_3 to 2.7.5_1... done
[7/10] Upgrading glib from 2.28.8_4 to 2.34.3...warning: undefined
reference to <schema id='org.gnome.desktop.default-applications.at'/>
 done
[8/10] Upgrading gamin from 0.1.10_4 to 0.1.10_5... done
[9/10] Upgrading gio-fam-backend from 2.28.8_1 to 2.34.3... done
[10/10] Installing mdbtools-0.5_14... done

# pkg check -B
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/animate - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/compare - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/composite - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/conjure - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/convert - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/display - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/identify - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/import - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/mogrify - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/montage - shared library
libpcre.so.1 not found
pkg: (ImageMagick-6.7.9.4) /usr/local/bin/stream - shared library
libpcre.so.1 not found
pkg: (ORBit2-2.14.19) /usr/local/bin/linc-cleanup-sockets - shared
library libpcre.so.1 not found
pkg: (ORBit2-2.14.19) /usr/local/bin/orbit-idl-2 - shared library
libpcre.so.1 not found
pkg: (abiword-2.8.4_2) /usr/local/bin/abiword - shared library
libpcre.so.1 not found
pkg: (bluefish-2.2.2_1) /usr/local/bin/bluefish - shared library
libpcre.so.1 not found
pkg: (consolekit-0.4.3) /usr/local/bin/ck-history - shared library
libpcre.so.1 not found
pkg: (consolekit-0.4.3) /usr/local/bin/ck-launch-session - shared
library libpcre.so.1 not found
pkg: (consolekit-0.4.3) /usr/local/bin/ck-list-sessions - shared
library libpcre.so.1 not found
pkg: (consolekit-0.4.3) /usr/local/libexec/ck-collect-session-info -
shared library libpcre.so.1 not found
pkg: (consolekit-0.4.3) /usr/local/sbin/ck-log-system-restart - shared
library libpcre.so.1 not found
pkg: (consolekit-0.4.3) /usr/local/sbin/ck-log-system-start - shared
library libpcre.so.1 not found
...

Best regards,
Tomek

-- 
CeDeROM, SQ7MHZ, http://www.tomek.cedro.info