[package - 111armv6-quarterly][science/py-scipy] Failed for py36-scipy-0.19.0_5 in configure

Thu May 24 01:13:18 UTC 2018

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     python at FreeBSD.org
Last committer: gerald at FreeBSD.org
Ident:          $FreeBSD: branches/2018Q2/science/py-scipy/Makefile 464084 2018-03-10 17:46:04Z gerald $
Log URL:        http://beefy15.nyi.freebsd.org/data/111armv6-quarterly/470751/logs/py36-scipy-0.19.0_5.log
Build URL:      http://beefy15.nyi.freebsd.org/build.html?mastername=111armv6-quarterly&build=470751
Log:

=>> Building science/py-scipy
build started at Thu May 24 01:12:30 UTC 2018
port directory: /usr/ports/science/py-scipy
package name: py36-scipy-0.19.0_5
building for: FreeBSD 111armv6-quarterly-job-23 11.1-RELEASE-p6 FreeBSD 11.1-RELEASE-p6 1101001 arm
maintained by: python at FreeBSD.org
Makefile ident:      $FreeBSD: branches/2018Q2/science/py-scipy/Makefile 464084 2018-03-10 17:46:04Z gerald $
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=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py36-scipy-0.19.0_5 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.10.5.txz
[111armv6-quarterly-job-23] Installing pkg-1.10.5...
[111armv6-quarterly-job-23] Extracting pkg-1.10.5: .......... done
===>   py36-scipy-0.19.0_5 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py36-scipy-0.19.0_5
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py36-scipy-0.19.0_5 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py36-scipy-0.19.0_5 for building
=> SHA256 Checksum OK for scipy-0.19.0.zip.
=> SHA256 Checksum OK for scipy-ref-0.19.0.pdf.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py36-scipy-0.19.0_5 for building
===>  Extracting for py36-scipy-0.19.0_5
=> SHA256 Checksum OK for scipy-0.19.0.zip.
=> SHA256 Checksum OK for scipy-ref-0.19.0.pdf.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py36-scipy-0.19.0_5
===========================================================================
=======================<phase: build-depends  >============================
===>   py36-scipy-0.19.0_5 depends on package: py36-numpy>0 - not found
===>   Installing existing package /packages/All/py36-numpy-1.13.3_2,1.txz
[111armv6-quarterly-job-23] Installing py36-numpy-1.13.3_2,1...
[111armv6-quarterly-job-23] `-- Installing blas-3.5.0_4...
[111armv6-quarterly-job-23] |   `-- Installing gcc6-6.4.0_4...
[111armv6-quarterly-job-23] |   | `-- Installing binutils-2.30_2,1...
[111armv6-quarterly-job-23] |   |   `-- Installing gettext-runtime-0.19.8.1_1...
[111armv6-quarterly-job-23] |   |   | `-- Installing indexinfo-0.3.1...
[111armv6-quarterly-job-23] |   |   | `-- Extracting indexinfo-0.3.1: .... done
[111armv6-quarterly-job-23] |   |   `-- Extracting gettext-runtime-0.19.8.1_1: .......... done
[111armv6-quarterly-job-23] |   | `-- Extracting binutils-2.30_2,1: .......... done
[111armv6-quarterly-job-23] |   | `-- Installing gmp-6.1.2...
[111armv6-quarterly-job-23] |   | `-- Extracting gmp-6.1.2: .......... done
[111armv6-quarterly-job-23] |   | `-- Installing mpc-1.1.0...
[111armv6-quarterly-job-23] |   |   `-- Installing mpfr-3.1.6...
[111armv6-quarterly-job-23] |   |   `-- Extracting mpfr-3.1.6: .......... done
[111armv6-quarterly-job-23] |   | `-- Extracting mpc-1.1.0: ...... done
[111armv6-quarterly-job-23] |   `-- Extracting gcc6-6.4.0_4: .......... done
[111armv6-quarterly-job-23] `-- Extracting blas-3.5.0_4: ....... done
[111armv6-quarterly-job-23] `-- Installing cblas-1.0_8...
[111armv6-quarterly-job-23] `-- Extracting cblas-1.0_8: ......... done
[111armv6-quarterly-job-23] `-- Installing lapack-3.5.0_4...
[111armv6-quarterly-job-23] `-- Extracting lapack-3.5.0_4: .......... done
[111armv6-quarterly-job-23] `-- Installing py36-setuptools-39.0.1...
[111armv6-quarterly-job-23] |   `-- Installing python36-3.6.4...
[111armv6-quarterly-job-23] |   | `-- Installing libffi-3.2.1_2...
[111armv6-quarterly-job-23] |   | `-- Extracting libffi-3.2.1_2: .......... done
[111armv6-quarterly-job-23] |   | `-- Installing readline-7.0.3_1...
[111armv6-quarterly-job-23] |   | `-- Extracting readline-7.0.3_1: .......... done
[111armv6-quarterly-job-23] |   `-- Extracting python36-3.6.4: .......... done
[111armv6-quarterly-job-23] `-- Extracting py36-setuptools-39.0.1: .......... done
[111armv6-quarterly-job-23] `-- Installing suitesparse-4.0.2_8...
[111armv6-quarterly-job-23] |   `-- Installing openblas-0.2.20_2,1...
[111armv6-quarterly-job-23] |   `-- Extracting openblas-0.2.20_2,1: ......... done
[111armv6-quarterly-job-23] `-- Extracting suitesparse-4.0.2_8: .......... done
[111armv6-quarterly-job-23] Extracting py36-numpy-1.13.3_2,1: .......... done
Message from gcc6-6.4.0_4:

To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc6

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
Message from cblas-1.0_8:

===>   NOTICE:

The cblas port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
Message from python36-3.6.4:

===========================================================================

Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

py36-gdbm       databases/py-gdbm at py36
py36-sqlite3    databases/py-sqlite3 at py36
py36-tkinter    x11-toolkits/py-tkinter at py36

===========================================================================
Message from py36-setuptools-39.0.1:

*******************************************************************

  Only /usr/local/bin/easy_install-3.6 script has been installed
  since Python 3.6 is not the default Python version.

*******************************************************************
===>   py36-scipy-0.19.0_5 depends on package: py36-numpy>0 - found
===>   Returning to build of py36-scipy-0.19.0_5
===>   py36-scipy-0.19.0_5 depends on executable: gfortran6 - found
===>   py36-scipy-0.19.0_5 depends on package: py36-setuptools>0 - found
===>   py36-scipy-0.19.0_5 depends on file: /usr/local/bin/python3.6 - found
===>   py36-scipy-0.19.0_5 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends    >============================
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py36-scipy-0.19.0_5
setup.py:323: UserWarning: Unrecognized setuptools command, proceeding with generating Cython sources and expanding templates
  warnings.warn("Unrecognized setuptools command, proceeding with "
Traceback (most recent call last):
  File "/usr/local/lib/python3.6/site-packages/numpy/core/__init__.py", line 16, in <module>
    from . import multiarray
ImportError: /usr/local/lib/libblas.so.2: Undefined symbol "__aeabi_uidiv"

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "setup.py", line 416, in <module>
    setup_package()
  File "setup.py", line 396, in setup_package
    from numpy.distutils.core import setup
  File "/usr/local/lib/python3.6/site-packages/numpy/__init__.py", line 142, in <module>
    from . import add_newdocs
  File "/usr/local/lib/python3.6/site-packages/numpy/add_newdocs.py", line 13, in <module>
    from numpy.lib import add_newdoc
  File "/usr/local/lib/python3.6/site-packages/numpy/lib/__init__.py", line 8, in <module>
    from .type_check import *
  File "/usr/local/lib/python3.6/site-packages/numpy/lib/type_check.py", line 11, in <module>
    import numpy.core.numeric as _nx
  File "/usr/local/lib/python3.6/site-packages/numpy/core/__init__.py", line 26, in <module>
    raise ImportError(msg)
ImportError: 
Importing the multiarray numpy extension module failed.  Most
likely you are trying to import a failed build of numpy.
If you're working with a numpy git repo, try `git clean -xdf` (removes all
files not under version control).  Otherwise reinstall numpy.

Original error was: /usr/local/lib/libblas.so.2: Undefined symbol "__aeabi_uidiv"

*** Error code 1

Stop.
make: stopped in /usr/ports/science/py-scipy