[package - 111armv6-quarterly][astro/py-pyfits] Failed for py27-pyfits-3.4 in build

pkg-fallout at FreeBSD.org pkg-fallout at FreeBSD.org
Sat Feb 17 02:40:37 UTC 2018


You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     ports at FreeBSD.org
Last committer: sunpoet at FreeBSD.org
Ident:          $FreeBSD: branches/2018Q1/astro/py-pyfits/Makefile 457587 2017-12-30 06:43:51Z sunpoet $
Log URL:        http://beefy15.nyi.freebsd.org/data/111armv6-quarterly/462076/logs/py27-pyfits-3.4.log
Build URL:      http://beefy15.nyi.freebsd.org/build.html?mastername=111armv6-quarterly&build=462076
Log:

=>> Building astro/py-pyfits
build started at Sat Feb 17 02:40:02 UTC 2018
port directory: /usr/ports/astro/py-pyfits
package name: py27-pyfits-3.4
building for: FreeBSD 111armv6-quarterly-job-08 11.1-RELEASE-p6 FreeBSD 11.1-RELEASE-p6 1101001 arm
maintained by: ports at FreeBSD.org
Makefile ident:      $FreeBSD: branches/2018Q1/astro/py-pyfits/Makefile 457587 2017-12-30 06:43:51Z sunpoet $
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=======================<phase: check-sanity   >============================
===>   NOTICE:

The pyfits port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port

===>   NOTICE:

This port is deprecated; you may wish to reconsider installing it:

Use astro/py-astropy instead.

It is scheduled to be removed on or after 2018-01-31.

===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py27-pyfits-3.4 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.10.3_1.txz
[111armv6-quarterly-job-08] Installing pkg-1.10.3_1...
[111armv6-quarterly-job-08] Extracting pkg-1.10.3_1: .......... done
===>   py27-pyfits-3.4 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py27-pyfits-3.4
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>   NOTICE:

The pyfits port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port

===>   NOTICE:

This port is deprecated; you may wish to reconsider installing it:

Use astro/py-astropy instead.

<snip>
=======================<phase: patch          >============================
===>  Patching for py27-pyfits-3.4
===========================================================================
=======================<phase: build-depends  >============================
===>   py27-pyfits-3.4 depends on package: py27-numpy>0 - not found
===>   Installing existing package /packages/All/py27-numpy-1.13.3,1.txz
[111armv6-quarterly-job-08] Installing py27-numpy-1.13.3,1...
[111armv6-quarterly-job-08] `-- Installing blas-3.5.0_3...
[111armv6-quarterly-job-08] |   `-- Installing gcc6-6.4.0_3...
[111armv6-quarterly-job-08] |   | `-- Installing binutils-2.28,1...
[111armv6-quarterly-job-08] |   |   `-- Installing gettext-runtime-0.19.8.1_1...
[111armv6-quarterly-job-08] |   |   | `-- Installing indexinfo-0.3.1...
[111armv6-quarterly-job-08] |   |   | `-- Extracting indexinfo-0.3.1: .... done
[111armv6-quarterly-job-08] |   |   `-- Extracting gettext-runtime-0.19.8.1_1: .......... done
[111armv6-quarterly-job-08] |   | `-- Extracting binutils-2.28,1: .......... done
[111armv6-quarterly-job-08] |   | `-- Installing gmp-6.1.2...
[111armv6-quarterly-job-08] |   | `-- Extracting gmp-6.1.2: .......... done
[111armv6-quarterly-job-08] |   | `-- Installing mpc-1.0.3...
[111armv6-quarterly-job-08] |   |   `-- Installing mpfr-3.1.6...
[111armv6-quarterly-job-08] |   |   `-- Extracting mpfr-3.1.6: .......... done
[111armv6-quarterly-job-08] |   | `-- Extracting mpc-1.0.3: ...... done
[111armv6-quarterly-job-08] |   `-- Extracting gcc6-6.4.0_3: .......... done
[111armv6-quarterly-job-08] `-- Extracting blas-3.5.0_3: ....... done
[111armv6-quarterly-job-08] `-- Installing cblas-1.0_7...
[111armv6-quarterly-job-08] `-- Extracting cblas-1.0_7: ......... done
[111armv6-quarterly-job-08] `-- Installing lapack-3.5.0_3...
[111armv6-quarterly-job-08] `-- Extracting lapack-3.5.0_3: .......... done
[111armv6-quarterly-job-08] `-- Installing py27-setuptools-36.5.0...
[111armv6-quarterly-job-08] |   `-- Installing python27-2.7.14_1...
[111armv6-quarterly-job-08] |   | `-- Installing libffi-3.2.1_2...
[111armv6-quarterly-job-08] |   | `-- Extracting libffi-3.2.1_2: .......... done
[111armv6-quarterly-job-08] |   | `-- Installing readline-7.0.3_1...
[111armv6-quarterly-job-08] |   | `-- Extracting readline-7.0.3_1: .......... done
[111armv6-quarterly-job-08] |   `-- Extracting python27-2.7.14_1: .......... done
[111armv6-quarterly-job-08] `-- Extracting py27-setuptools-36.5.0: .......... done
[111armv6-quarterly-job-08] `-- Installing suitesparse-4.0.2_7...
[111armv6-quarterly-job-08] |   `-- Installing openblas-0.2.20_1,1...
[111armv6-quarterly-job-08] |   `-- Extracting openblas-0.2.20_1,1: ......... done
[111armv6-quarterly-job-08] `-- Extracting suitesparse-4.0.2_7: .......... done
[111armv6-quarterly-job-08] Extracting py27-numpy-1.13.3,1: .......... done
Message from gcc6-6.4.0_3:

To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc6

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
Message from cblas-1.0_7:

===>   NOTICE:

The cblas port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
Message from python27-2.7.14_1:

===========================================================================

Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

bsddb           databases/py-bsddb
gdbm            databases/py-gdbm
sqlite3         databases/py-sqlite3
tkinter         x11-toolkits/py-tkinter

===========================================================================
===>   py27-pyfits-3.4 depends on package: py27-numpy>0 - found
===>   Returning to build of py27-pyfits-3.4
===>   py27-pyfits-3.4 depends on package: py27-d2to1>=0 - not found
===>   Installing existing package /packages/All/py27-d2to1-0.2.12.p1.txz
[111armv6-quarterly-job-08] Installing py27-d2to1-0.2.12.p1...
[111armv6-quarterly-job-08] Extracting py27-d2to1-0.2.12.p1: .......... done
===>   py27-pyfits-3.4 depends on package: py27-d2to1>=0 - found
===>   Returning to build of py27-pyfits-3.4
===>   py27-pyfits-3.4 depends on package: py27-stsci.distutils>=0 - not found
===>   Installing existing package /packages/All/py27-stsci.distutils-0.3.7.txz
[111armv6-quarterly-job-08] Installing py27-stsci.distutils-0.3.7...
[111armv6-quarterly-job-08] Extracting py27-stsci.distutils-0.3.7: .......... done
===>   py27-pyfits-3.4 depends on package: py27-stsci.distutils>=0 - found
===>   Returning to build of py27-pyfits-3.4
===>   py27-pyfits-3.4 depends on package: py27-setuptools>0 - found
===>   py27-pyfits-3.4 depends on file: /usr/local/bin/python2.7 - found
===========================================================================
=======================<phase: lib-depends    >============================
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py27-pyfits-3.4
running config
===========================================================================
=======================<phase: build          >============================
===>  Building for py27-pyfits-3.4
running build
running build_py
creating build
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/card.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/_numpy_hacks.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/_release.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/fitsrec.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/__init__.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/convenience.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/version.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/util.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/diff.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/verify.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/header.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/core.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/column.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/file.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
copying pyfits/py3compat.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/_compat
copying pyfits/_compat/weakref.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/_compat
copying pyfits/_compat/__init__.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/_compat
copying pyfits/_compat/odict.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/_compat
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/_compat/_odict_py2
copying pyfits/_compat/_odict_py2/__init__.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/_compat/_odict_py2
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/_compat/_weakset_py2
copying pyfits/_compat/_weakset_py2/__init__.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/_compat/_weakset_py2
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/extern
copying pyfits/extern/__init__.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/extern
copying pyfits/extern/six.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/extern
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/__init__.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/image.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/nonstandard.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/table.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/base.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/hdulist.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/compressed.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/streaming.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
copying pyfits/hdu/groups.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/hdu
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/scripts
copying pyfits/scripts/fitsdiff.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/scripts
copying pyfits/scripts/fitscheck.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/scripts
copying pyfits/scripts/__init__.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/scripts
copying pyfits/scripts/fitsinfo.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/scripts
copying pyfits/scripts/fitsheader.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/scripts
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_nonstandard.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_util.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_structured.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/__init__.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_header.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_uint.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_diff.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_checksum.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_table.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_groups.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/util.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_hdulist.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_core.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_division.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
copying pyfits/tests/test_image.py -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests
creating build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/memtest.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/comp.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/blank.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/tdim.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/stddata.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/random_groups.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/o4sp040b0_raw.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/scale.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/arange.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/fixed-1890.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/checksum.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/zerowidth.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/ascii.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/test0.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/tb.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
copying pyfits/tests/data/table.fits -> build/lib.freebsd-11.1-RELEASE-p6-arm-2.7/pyfits/tests/data
running build_ext
running pre_hook stsci.distutils.hooks.numpy_extension_hook for command build_ext


Numpy is required to build this package.
Please install Numpy on your system first.

hook stsci.distutils.hooks.numpy_extension_hook raised exception: 1

Traceback (most recent call last):
  File "/usr/local/lib/python2.7/site-packages/d2to1/util.py", line 504, in run_command_hooks
    hook_obj(cmd_obj)
  File "/usr/local/lib/python2.7/site-packages/stsci/distutils/hooks.py", line 413, in numpy_extension_hook
    sys.exit(1)
SystemExit: 1

*** Error code 1

Stop.
make: stopped in /usr/ports/astro/py-pyfits


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