[package - 110arm64-default][science/hdf] Failed for hdf-4.2.11_2, 1 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Wed Apr 19 17:06:44 UTC 2017
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: ports at FreeBSD.org
Last committer: gerald at FreeBSD.org
Ident: $FreeBSD: head/science/hdf/Makefile 437439 2017-04-01 15:23:30Z gerald $
Log URL: http://thunderx1.nyi.freebsd.org/data/110arm64-default/438755/logs/hdf-4.2.11_2,1.log
Build URL: http://thunderx1.nyi.freebsd.org/build.html?mastername=110arm64-default&build=438755
Log:
====>> Building science/hdf
build started at Wed Apr 19 17:05:12 UTC 2017
port directory: /usr/ports/science/hdf
building for: FreeBSD 110arm64-default-job-14 11.0-RELEASE-p1 FreeBSD 11.0-RELEASE-p1 arm64
maintained by: ports at FreeBSD.org
Makefile ident: $FreeBSD: head/science/hdf/Makefile 437439 2017-04-01 15:23:30Z gerald $
Poudriere version: 3.1.17-9-gf49c6f78
Host OSVERSION: 1100121
Jail OSVERSION: 1100122
Job Id: 14
!!! Jail is newer than host. (Jail: 1100122, Host: 1100121) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
---Begin Environment---
SHELL=/bin/csh
OSVERSION=1100122
UNAME_v=FreeBSD 11.0-RELEASE-p1
UNAME_r=11.0-RELEASE-p1
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/110arm64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=hdf-4.2.11_2,1
OLDPWD=/
PWD=/usr/local/poudriere/data/.m/110arm64-default/ref/.p/pool
MASTERNAME=110arm64-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.17-9-gf49c6f78
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin OPTIONS List---
===> The following configuration options are available for hdf-4.2.11_2,1:
EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings
---End OPTIONS List---
--CONFIGURE_ARGS--
--enable-shared --with-jpeg=/usr/local --with-szlib=/usr/local --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" XDG_DATA_HOME=/wrkdirs/usr/ports/science/hdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/hdf/work HOME=/wrkdirs/usr/ports/science/hdf/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran5" FC="gfortran5" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc5" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc5" XDG_DATA_HOME=/wrkdirs/usr/ports/science/hdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/hdf/work HOME=/wrkdirs/usr/ports/science/hdf/work TMPDIR="/tmp" NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-a
liasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/hdf"
EXAMPLESDIR="share/examples/hdf"
DATADIR="share/hdf"
WWWDIR="www/hdf"
ETCDIR="etc/hdf"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/hdf
DOCSDIR=/usr/local/share/doc/hdf
EXAMPLESDIR=/usr/local/share/examples/hdf
WWWDIR=/usr/local/www/hdf
ETCDIR=/usr/local/etc/hdf
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
ARCH=aarch64
CONFIGURE_MAX_CMD_LEN=262144
OPSYS=FreeBSD
OSREL=11.0
OSVERSION=1100122
PYTHONBASE=/usr/local
UID=0
_JAVA_OS_LIST_REGEXP=native\|linux
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
_OSRELEASE=11.0-RELEASE-p1
#### Misc Poudriere ####
GID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 1048576
stack size (kbytes, -s) 1048576
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 1024
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===> NOTICE:
The hdf port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===========================================================================
=======================<phase: pkg-depends >============================
===> hdf-4.2.11_2,1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.10.1.txz
[110arm64-default-job-14] Installing pkg-1.10.1...
[110arm64-default-job-14] Extracting pkg-1.10.1: .......... done
===> hdf-4.2.11_2,1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of hdf-4.2.11_2,1
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> NOTICE:
The hdf port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===> Fetching all distfiles required by hdf-4.2.11_2,1 for building
===========================================================================
=======================<phase: checksum >============================
===> NOTICE:
The hdf port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port
===> Fetching all distfiles required by hdf-4.2.11_2,1 for building
=> SHA256 Checksum OK for hdf-4.2.11.tar.bz2.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> NOTICE:
<snip>
checking for ANSI C header files... (cached) yes
checking whether cc understands -c and -o together... yes
checking how to run the C++ preprocessor... c++ -E
checking whether gfortran5 understands -c and -o together... yes
checking size of int*... 8
checking whether byte ordering is bigendian... no
checking for build mode... production
checking for math library support... yes
checking for fork... (cached) yes
checking for system... yes
checking for vfork... (cached) yes
checking for wait... yes
checking if deprecated public symbols are available... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating libhdf4.settings
config.status: creating hdf/Makefile
config.status: creating hdf/examples/Makefile
config.status: creating hdf/fortran/Makefile
config.status: creating hdf/fortran/examples/Makefile
config.status: creating hdf/src/Makefile
config.status: creating hdf/test/Makefile
config.status: creating hdf/util/Makefile
config.status: creating hdf/util/h4cc
config.status: creating hdf/util/h4fc
config.status: creating hdf/util/h4redeploy
config.status: creating hdf/util/testutil.sh
config.status: creating man/Makefile
config.status: creating mfhdf/fortran/ftest.f
config.status: creating mfhdf/fortran/jackets.c
config.status: creating mfhdf/fortran/netcdf.inc
config.status: creating mfhdf/libsrc/netcdf.h
config.status: creating mfhdf/Makefile
config.status: creating mfhdf/dumper/Makefile
config.status: creating mfhdf/dumper/testhdp.sh
config.status: creating mfhdf/examples/Makefile
config.status: creating mfhdf/examples/testexamples.sh
config.status: creating mfhdf/fortran/Makefile
config.status: creating mfhdf/fortran/examples/Makefile
config.status: creating mfhdf/fortran/testfortran.sh
config.status: creating mfhdf/hdfimport/Makefile
config.status: creating mfhdf/hdfimport/testutil.sh
config.status: creating mfhdf/hdiff/Makefile
config.status: creating mfhdf/hdiff/testhdiff.sh
config.status: creating mfhdf/hrepack/Makefile
config.status: creating mfhdf/hrepack/hrepack.sh
config.status: creating mfhdf/hrepack/hrepack_all.sh
config.status: creating mfhdf/libsrc/Makefile
config.status: creating mfhdf/ncdump/Makefile
config.status: creating mfhdf/ncdump/testncdump.sh
config.status: creating mfhdf/ncgen/Makefile
config.status: creating mfhdf/ncgen/testncgen.sh
config.status: creating mfhdf/nctest/Makefile
config.status: creating mfhdf/test/Makefile
config.status: creating mfhdf/test/testmfhdf.sh
config.status: creating mfhdf/xdr/Makefile
config.status: creating hdf/src/h4config.h
config.status: executing h4config commands
modifying hdf/src/h4config.h
Post process libhdf4.settings
config.status: executing depfiles commands
config.status: executing libtool commands
SUMMARY OF THE HDF4 CONFIGURATION
=================================
General Information:
-------------------
HDF4 Version: 4.2.11
Configured on: Wed Apr 19 17:06:19 UTC 2017
Configured by: root at 110arm64-default-job-14
Configure mode: production
Host system: aarch64-portbld-freebsd11.0
Uname information: FreeBSD 110arm64-default-job-14 11.0-RELEASE-p1 FreeBSD 11.0-RELEASE-p1 arm64
Libraries:
Installation point: /usr/local
Compiling Options:
------------------
Compilation Mode: production
C compiler: /usr/bin/cc
CFLAGS: -O2 -pipe -fno-strict-aliasing -ansi
CPPFLAGS: -I/usr/local/include -I/usr/local/include -DBIG_LONGS -DSWAP
Shared Libraries: yes
Static Libraries: yes
Statically Linked Executables: no
LDFLAGS: -Wl,-rpath=/usr/local/lib/gcc5 -L/usr/local/lib/gcc5 -B/usr/local/bin -L/usr/local/lib -L/usr/local/lib
Extra libraries: -lsz -ljpeg -lz
Archiver: /usr/local/bin/ar
Ranlib: /usr/local/bin/ranlib
Languages:
----------
Fortran: yes
Fortran Compiler: /usr/local/bin/gfortran5
FFLAGS: -O -Wl,-rpath=/usr/local/lib/gcc5
Features:
---------
SZIP compression: enabled with encoder
Support for netCDF API 2.3.2: yes
===========================================================================
=======================<phase: build >============================
===> Building for hdf-4.2.11_2,1
Making all in hdf
Making all in src
/usr/bin/make all-am
/bin/sh ../../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I/usr/local/include -I/usr/local/include -DBIG_LONGS -DSWAP -O2 -pipe -fno-strict-aliasing -ansi -MT atom.lo -MD -MP -MF .deps/atom.Tpo -c -o atom.lo atom.c
libtool: compile: cc -DHAVE_CONFIG_H -I. -I/usr/local/include -I/usr/local/include -DBIG_LONGS -DSWAP -O2 -pipe -fno-strict-aliasing -ansi -MT atom.lo -MD -MP -MF .deps/atom.Tpo -c atom.c -fPIC -DPIC -o .libs/atom.o
In file included from atom.c:64:
In file included from ./hdf.h:20:
./hdfi.h:1115:1: error: unknown type name 'No'
No machine type has been defined. Your Makefile needs to have someing like
^
./hdfi.h:1115:11: error: expected ';' after top level declarator
No machine type has been defined. Your Makefile needs to have someing like
^
;
In file included from atom.c:64:
./hdf.h:142:9: error: unknown type name 'int32'
typedef int32 HFILEID;
^
./hdf.h:144:16: warning: declaration specifier missing, defaulting to 'int'
typedef intn (*hdf_termfunc_t)(void); /* termination function typedef */
^
int
./hdf.h:144:14: error: function cannot return function type 'int (void)'
typedef intn (*hdf_termfunc_t)(void); /* termination function typedef */
^
In file included from atom.c:64:
In file included from ./hdf.h:151:
./hbitio.h:35:7: error: unknown type name 'int32'
int32 acc_id; /* Access ID for H layer I/O routines */
^
./hbitio.h:36:7: error: unknown type name 'int32'
int32 bit_id; /* Bitfile ID for internal use */
^
./hbitio.h:39:7: error: unknown type name 'int32'
int32 block_offset, /* offset of the current buffered block in the dataset */
^
./hbitio.h:45:7: error: unknown type name 'uint8'
uint8 access; /* What the access on this file is ('r', 'w', etc..) */
^
./hbitio.h:46:7: error: unknown type name 'uint8'
uint8 mode; /* how are we interacting with the data now ('r', 'w', etc) */
^
./hbitio.h:47:7: error: unknown type name 'uint8'
uint8 bits; /* extra bit buffer, 0..BITNUM-1 bits */
^
./hbitio.h:48:7: error: unknown type name 'uint8'
uint8 *bytep; /* current position in buffer */
^
./hbitio.h:49:7: error: unknown type name 'uint8'
uint8 *bytez; /* end of buffer to compare */
^
./hbitio.h:50:7: error: unknown type name 'uint8'
uint8 *bytea; /* byte buffer */
^
./hbitio.h:43:18: error: field 'count' declared as a function
intn count, /* bit count to next boundary */
^
./hbitio.h:44:18: error: field 'buf_read' declared as a function
buf_read; /* number of bytes read into buffer (necessary for random I/O) */
^
./hbitio.h:57:7: error: unknown type name 'uint8'
const uint8 maskc[9]
^
./hbitio.h:67:7: error: unknown type name 'uint32'
const uint32 maskl[33]
^
In file included from atom.c:64:
In file included from ./hdf.h:152:
./hcomp.h:65:8: error: unknown type name 'uint16'
extern uint16 compress_map[];
^
./hcomp.h:89:13: error: unknown type name 'int32'
int32 nt; /* number type */
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
1 warning and 20 errors generated.
*** Error code 1
Stop.
make[4]: stopped in /wrkdirs/usr/ports/science/hdf/work/hdf-4.2.11/hdf/src
*** Error code 1
Stop.
make[3]: stopped in /wrkdirs/usr/ports/science/hdf/work/hdf-4.2.11/hdf/src
*** Error code 1
Stop.
make[2]: stopped in /wrkdirs/usr/ports/science/hdf/work/hdf-4.2.11/hdf
*** Error code 1
Stop.
make[1]: stopped in /wrkdirs/usr/ports/science/hdf/work/hdf-4.2.11
*** Error code 1
Stop.
make: stopped in /usr/ports/science/hdf
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