[package - head-armv6-default][math/algae] Failed for algae-4.3.6_9 in configure

Sun Apr 24 00:22:34 UTC 2016

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     ports at FreeBSD.org
Last committer: amdmi3 at FreeBSD.org
Ident:          $FreeBSD: head/math/algae/Makefile 405891 2016-01-12 16:20:31Z amdmi3 $
Log URL:        http://beefy8.nyi.freebsd.org/data/head-armv6-default/p413605_s298221/logs/algae-4.3.6_9.log
Build URL:      http://beefy8.nyi.freebsd.org/build.html?mastername=head-armv6-default&build=p413605_s298221
Log:

====>> Building math/algae
build started at Sun Apr 24 00:21:06 UTC 2016
port directory: /usr/ports/math/algae
building for: FreeBSD head-armv6-default-job-02 11.0-CURRENT FreeBSD 11.0-CURRENT r298221 arm
maintained by: ports at FreeBSD.org
Makefile ident:      $FreeBSD: head/math/algae/Makefile 405891 2016-01-12 16:20:31Z amdmi3 $
Poudriere version: 3.1.12
Host OSVERSION: 1100102
Jail OSVERSION: 1100105

!!! Jail is newer than host. (Jail: 1100105, Host: 1100102) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!

---Begin Environment---
SHELL=/bin/csh
UNAME_p=armv6
UNAME_m=arm
ABI_FILE=/usr/lib/crt1.o
UNAME_v=FreeBSD 11.0-CURRENT r298221
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
OPSYS=FreeBSD
ARCH=armv6
LINUX_OSRELEASE=2.6.32
SAVED_TERM=screen
QEMU_EMULATING=1
MASTERMNT=/usr/local/poudriere/data/.m/head-armv6-default/ref
UID=0
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
_JAVA_VERSION_LIST_REGEXP=1.6\|1.7\|1.8\|1.6+\|1.7+\|1.8+
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=algae-4.3.6_9
OSREL=11.0
_OSRELEASE=11.0-CURRENT
PYTHONBASE=/usr/local
OLDPWD=/
_SMP_CPUS=24
PWD=/usr/local/poudriere/data/.m/head-armv6-default/ref/.p/pool
MASTERNAME=head-armv6-default
SCRIPTPREFIX=/usr/local/share/poudriere
_JAVA_VENDOR_LIST_REGEXP=openjdk\|oracle\|sun
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.12
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
CONFIGURE_MAX_CMD_LEN=262144
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
_JAVA_OS_LIST_REGEXP=native\|linux
OSVERSION=1100105
---End Environment---

---Begin OPTIONS List---
---End OPTIONS List---

--CONFIGURE_ARGS--
--disable-dlmalloc --without-fftw --without-blas  --without-lapack --without-bcslib --without-npsol --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/math/algae/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/algae/work  HOME=/wrkdirs/usr/ports/math/algae/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/math/algae/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/algae/work  HOME=/wrkdirs/usr/ports/math/algae/work TMPDIR="/tmp" NO_PIE=yes WITHOUT_DEBUG_FILES=yes WITHOUT_KERNEL_SYMBOLS=yes SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="/nxb-bin/usr/bin/cc" CFLAGS="-O2 -pipe -mfloat-abi=softfp  -fno-strict-aliasing"  CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc48  -L/usr/local/lib/gcc48 -B
 /usr/local/bin" LIBS=""  CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -mfloat-abi=softfp -fno-strict-aliasing "  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
ALGAE_VERSION=4.3.6
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/algae"
EXAMPLESDIR="share/examples/algae"
DATADIR="share/algae"
WWWDIR="www/algae"
ETCDIR="etc/algae"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/algae
DOCSDIR=/usr/local/share/doc/algae
EXAMPLESDIR=/usr/local/share/examples/algae
WWWDIR=/usr/local/www/algae
ETCDIR=/usr/local/etc/algae
--End SUB_LIST--

---Begin make.conf---
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
LD=/nxb-bin/usr/bin/ld
OBJCOPY=/nxb-bin/usr/bin/objcopy
SIZE=/nxb-bin/usr/bin/size
STRIPBIN=/nxb-bin/usr/bin/strip
SED=/nxb-bin/usr/bin/sed
READELF=/nxb-bin/usr/bin/readelf
RANLIB=/nxb-bin/usr/bin/ranlib
YACC=/nxb-bin/usr/bin/yacc
NM=/nxb-bin/usr/bin/nm
MAKE=/nxb-bin/usr/bin/make
STRINGS=/nxb-bin/usr/bin/strings
AWK=/nxb-bin/usr/bin/awk
FLEX=/nxb-bin/usr/bin/flex
CC=/nxb-bin/usr/bin/cc
CPP=/nxb-bin/usr/bin/cpp
CXX=/nxb-bin/usr/bin/c++
AS=/nxb-bin/usr/bin/as
NM=/nxb-bin/usr/bin/nm
<snip>
More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port

===>  License GPLv2+ accepted by the user
===> Fetching all distfiles required by algae-4.3.6_9 for building
=> SHA256 Checksum OK for algae-4.3.6.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>   NOTICE:

The algae port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port

===>  License GPLv2+ accepted by the user
===> Fetching all distfiles required by algae-4.3.6_9 for building
===>  Extracting for algae-4.3.6_9
=> SHA256 Checksum OK for algae-4.3.6.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for algae-4.3.6_9
===>  Applying FreeBSD patches for algae-4.3.6_9
===========================================================================
=======================<phase: build-depends  >============================
===>   algae-4.3.6_9 depends on executable: gfortran48 - not found
===>   Installing existing package /packages/All/gcc-4.8.5_2.txz
[head-armv6-default-job-02] Installing gcc-4.8.5_2...
[head-armv6-default-job-02] `-- Installing indexinfo-0.2.4...
[head-armv6-default-job-02] `-- Extracting indexinfo-0.2.4: .... done
[head-armv6-default-job-02] `-- Installing mpc-1.0.3...
[head-armv6-default-job-02] |   `-- Installing gmp-5.1.3_3...
[head-armv6-default-job-02] |   `-- Extracting gmp-5.1.3_3: .......... done
[head-armv6-default-job-02] |   `-- Installing mpfr-3.1.3_1...
[head-armv6-default-job-02] |   `-- Extracting mpfr-3.1.3_1: .......... done
[head-armv6-default-job-02] `-- Extracting mpc-1.0.3: ...... done
[head-armv6-default-job-02] `-- Installing binutils-2.25.1_2,1...
[head-armv6-default-job-02] |   `-- Installing gettext-runtime-0.19.7...
[head-armv6-default-job-02] |   `-- Extracting gettext-runtime-0.19.7: .......... done
[head-armv6-default-job-02] `-- Extracting binutils-2.25.1_2,1: .......... done
[head-armv6-default-job-02] Extracting gcc-4.8.5_2: .......... done
Message from gcc-4.8.5_2:
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc48

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===>   algae-4.3.6_9 depends on executable: gfortran48 - found
===>   Returning to build of algae-4.3.6_9
===>   algae-4.3.6_9 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends    >============================
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for algae-4.3.6_9
configure: loading site script /usr/ports/Templates/config.site
checking for gcc... /nxb-bin/usr/bin/cc
checking for C compiler default output... a.out
checking whether the C compiler works... yes
checking whether we are cross compiling... no
checking for suffix of executables... 
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /nxb-bin/usr/bin/cc accepts -g... yes
checking for /nxb-bin/usr/bin/cc option to accept ANSI C... none needed
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether gfortran48 accepts -g... yes
checking for support of ANSI prototypes... yes
checking whether make sets $(MAKE)... yes
checking for gawk... (cached) /usr/bin/awk
checking for bison... no
checking for byacc... byacc
checking for flex... flex
checking for yywrap in -lfl... yes
checking lex output file root... lex.yy
checking whether yytext is a pointer... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking for ranlib... /usr/local/bin/ranlib
checking for m4... m4
checking for f2c... no
checking for efl... no
checking for ratfor... no
checking for ls... /bin/ls
checking for tr... /usr/bin/tr
checking for sed... (cached) /usr/bin/sed
checking for info... no
checking for lynx... no
checking for mozilla... no
checking for netscape... no
checking for mosaic... no
checking for gnuplot... no
checking for xterm... no
checking for broken linker... ok
checking build system type... armv6-portbld-freebsd11.0
checking host system type... armv6-portbld-freebsd11.0
checking how to run the C preprocessor... /nxb-bin/usr/bin/cpp
checking for egrep... grep -E
checking for ANSI C header files... (cached) yes
checking for working Fortran compiler... yes
checking for cooperative make and Fortran... yes
checking whether we can link Fortran... yes
checking how the Fortran compiler mangles its symbols... "T" becomes "t_"
checking for native Fortran libraries... using " -Wl,-rpath=/usr/local/lib/gcc48  -L/usr/local/lib/gcc48 -B/usr/local/bin -L/usr/local/lib  -lm"
checking for main in -lgfortran... yes
checking whether we can link C and native Fortran... yes
checking for tgetent in -ltermcap... yes
checking which library has the termcap functions... using termcap
checking for rl_yank in -lreadline... no
checking for fcntl.h... (cached) yes
checking for float.h... (cached) yes
checking for sys/time.h... (cached) yes
checking for memory.h... (cached) yes
checking for stdlib.h... (cached) yes
checking standards.h usability... no
checking standards.h presence... no
checking for standards.h... no
checking for stdarg.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/ioctl.h... (cached) yes
checking for sys/wait.h... (cached) yes
checking mcheck.h usability... no
checking mcheck.h presence... no
checking for mcheck.h... no
checking for malloc.h... (cached) no
checking fenv.h usability... yes
checking fenv.h presence... yes
checking for fenv.h... yes
checking machine/fpu.h usability... no
checking machine/fpu.h presence... no
checking for machine/fpu.h... no
checking ieeefp.h usability... yes
checking ieeefp.h presence... yes
checking for ieeefp.h... yes
checking siginfo.h usability... no
checking siginfo.h presence... no
checking for siginfo.h... no
checking for ucontext.h... (cached) yes
checking for a declaration of rint(3) in <math.h>... yes
checking for a declaration of drand48(3) in <stdlib.h>... yes
checking for an ANSI C-conforming const... yes
checking for working signed... yes
checking for size_t... (cached) yes
checking whether byte ordering is bigendian... no
checking for div_t... yes
checking for etime_... no
checking for strchr... yes
checking for memcpy... (cached) yes
checking for strerror... (cached) yes
checking for strtod... yes
checking for div... yes
checking for setitimer... yes
checking for mtrace... no
checking for abs... yes
checking for rint... yes
checking for random... (cached) yes
checking for drand48... yes
checking for sigset... yes
checking for sigaction... (cached) yes
checking for finite... yes
checking for acosh... yes
checking for asinh... yes
checking for atanh... yes
checking for snprintf... (cached) yes
checking for vsnprintf... (cached) yes
checking for feenableexcept... yes
checking for fpsetmask... yes
checking for fpsetdefaults... no
checking for broken rint... ok
checking for lax logarithms... ok
checking for working matherr... no
checking for dlopen in -ldl... no
checking return type of signal handlers... void
checking for SA_RESTART flag with sigaction... yes
checking for restartable system calls... no
checking for persistent signal disposition... no
checking for fpe in -lhandle_sigfpes... no
checking for proper floating point exception handling... no
configure: error: Cannot handle floating point exceptions.
===>  Script "configure" failed unexpectedly.
Please report the problem to ports at FreeBSD.org [maintainer] and attach the
"/wrkdirs/usr/ports/math/algae/work/algae-4.3.6/config.log" including the
output of the failure of your make command. Also, it might be a good idea to
provide an overview of all packages installed on your system (e.g. a
/usr/local/sbin/pkg-static info -g -Ea).
*** Error code 1

Stop.
make: stopped in /usr/ports/math/algae