[package - 93i386-default][science/py-pysal] Failed for py27-pysal-1.10.0 in configure

Mon Feb 1 15:38:32 UTC 2016

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     sunpoet at FreeBSD.org
Last committer: sunpoet at FreeBSD.org
Ident:          $FreeBSD: head/science/py-pysal/Makefile 398588 2015-10-04 17:59:41Z sunpoet $
Log URL:        http://beefy1.nyi.freebsd.org/data/93i386-default/407566/logs/py27-pysal-1.10.0.log
Build URL:      http://beefy1.nyi.freebsd.org/build.html?mastername=93i386-default&build=407566
Log:

====>> Building science/py-pysal
build started at Mon Feb  1 15:38:06 UTC 2016
port directory: /usr/ports/science/py-pysal
building for: FreeBSD 93i386-default-job-09 9.3-RELEASE-p36 FreeBSD 9.3-RELEASE-p36 i386
maintained by: sunpoet at FreeBSD.org
Makefile ident:      $FreeBSD: head/science/py-pysal/Makefile 398588 2015-10-04 17:59:41Z sunpoet $
Poudriere version: 3.1.10
Host OSVERSION: 1100093
Jail OSVERSION: 903000

---Begin Environment---
SHELL=/bin/csh
UNAME_p=i386
UNAME_m=i386
UNAME_v=FreeBSD 9.3-RELEASE-p36
UNAME_r=9.3-RELEASE-p36
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/93i386-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=py27-pysal-1.10.0
OLDPWD=/
PWD=/usr/local/poudriere/data/.m/93i386-default/ref/.p/pool
MASTERNAME=93i386-default
SCRIPTPREFIX=/usr/local/share/poudriere
USER=root
HOME=/root
POUDRIERE_VERSION=3.1.10
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
LIBEXECPREFIX=/usr/local/libexec/poudriere
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
OSVERSION=903000
---End Environment---

---Begin OPTIONS List---
---End OPTIONS List---

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
PYTHON="/usr/local/bin/python2.7" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pysal/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pysal/work  HOME=/wrkdirs/usr/ports/science/py-pysal/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pysal/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pysal/work  HOME=/wrkdirs/usr/ports/science/py-pysal/work TMPDIR="/tmp" NO_PIE=yes NO_DEBUG_FILES=yes SHELL=/bin/sh NO_LINT=YES LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing"  CPP="cpp" CPPFLAGS=""  LDFLAGS="" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing"  MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 444"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python2.7
PYTHON_LIBDIR=lib/python2.7
PYTHON_PLATFORM=freebsd9
PYTHON_SITELIBDIR=lib/python2.7/site-packages
PYTHON_VER=2.7
PYTHON_VERSION=python2.7
OSREL=9.3
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/pysal"
EXAMPLESDIR="share/examples/pysal"
DATADIR="share/pysal"
WWWDIR="www/pysal"
ETCDIR="etc/pysal"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/pysal
DOCSDIR=/usr/local/share/doc/pysal
EXAMPLESDIR=/usr/local/share/examples/pysal
WWWDIR=/usr/local/www/pysal
ETCDIR=/usr/local/etc/pysal
--End SUB_LIST--

---Begin make.conf---
MACHINE=i386
MACHINE_ARCH=i386
ARCH=${MACHINE_ARCH}
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
=======================<phase: check-sanity   >============================
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py27-pysal-1.10.0 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.6.3.txz
[93i386-default-job-09] Installing pkg-1.6.3...
[93i386-default-job-09] Extracting pkg-1.6.3: .......... done
Message from pkg-1.6.3:
If you are upgrading from the old package format, first run:

  # pkg2ng
===>   py27-pysal-1.10.0 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py27-pysal-1.10.0
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-pysal-1.10.0 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-pysal-1.10.0 for building
=> SHA256 Checksum OK for PySAL-1.10.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py27-pysal-1.10.0 for building
===>  Extracting for py27-pysal-1.10.0
=> SHA256 Checksum OK for PySAL-1.10.0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py27-pysal-1.10.0
===========================================================================
=======================<phase: build-depends  >============================
===>   py27-pysal-1.10.0 depends on package: py27-numpy>=1.3 - not found
===>   Installing existing package /packages/All/py27-numpy-1.10.4,1.txz
[93i386-default-job-09] Installing py27-numpy-1.10.4,1...
[93i386-default-job-09] `-- Installing python27-2.7.11_1...
[93i386-default-job-09] |   `-- Installing libffi-3.2.1...
[93i386-default-job-09] |   | `-- Installing indexinfo-0.2.4...
[93i386-default-job-09] |   | `-- Extracting indexinfo-0.2.4: .... done
[93i386-default-job-09] |   `-- Extracting libffi-3.2.1: .......... done
[93i386-default-job-09] |   `-- Installing gettext-runtime-0.19.6...
[93i386-default-job-09] |   | `-- Installing libiconv-1.14_9...
[93i386-default-job-09] |   | `-- Extracting libiconv-1.14_9: .......... done
[93i386-default-job-09] |   `-- Extracting gettext-runtime-0.19.6: .......... done
[93i386-default-job-09] `-- Extracting python27-2.7.11_1: .......... done
[93i386-default-job-09] `-- Installing py27-setuptools27-19.2...
[93i386-default-job-09] `-- Extracting py27-setuptools27-19.2: .......... done
[93i386-default-job-09] `-- Installing gcc-4.8.5_2...
[93i386-default-job-09] |   `-- Installing mpc-1.0.3...
[93i386-default-job-09] |   | `-- Installing gmp-5.1.3_2...
[93i386-default-job-09] |   | `-- Extracting gmp-5.1.3_2: .......... done
[93i386-default-job-09] |   | `-- Installing mpfr-3.1.3...
[93i386-default-job-09] |   | `-- Extracting mpfr-3.1.3: .......... done
[93i386-default-job-09] |   `-- Extracting mpc-1.0.3: ...... done
[93i386-default-job-09] |   `-- Installing gcc-ecj-4.5...
[93i386-default-job-09] |   `-- Extracting gcc-ecj-4.5: . done
[93i386-default-job-09] |   `-- Installing binutils-2.25.1,1...
[93i386-default-job-09] |   `-- Extracting binutils-2.25.1,1: .......... done
[93i386-default-job-09] `-- Extracting gcc-4.8.5_2: .......... done
[93i386-default-job-09] `-- Installing suitesparse-4.0.2_4...
[93i386-default-job-09] |   `-- Installing openblas-0.2.14,1...
[93i386-default-job-09] |   `-- Extracting openblas-0.2.14,1: ......... done
[93i386-default-job-09] `-- Extracting suitesparse-4.0.2_4: .......... done
[93i386-default-job-09] `-- Installing blas-3.5.0_3...
[93i386-default-job-09] `-- Extracting blas-3.5.0_3: ....... done
[93i386-default-job-09] `-- Installing lapack-3.5.0...
[93i386-default-job-09] `-- Extracting lapack-3.5.0: .......... done
[93i386-default-job-09] `-- Installing cblas-1.0_4...
[93i386-default-job-09] `-- Extracting cblas-1.0_4: ......... done
[93i386-default-job-09] Extracting py27-numpy-1.10.4,1: .......... done
Message from python27-2.7.11_1:
===========================================================================

Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

bsddb           databases/py-bsddb
gdbm            databases/py-gdbm
sqlite3         databases/py-sqlite3
tkinter         x11-toolkits/py-tkinter

===========================================================================
Message from gcc-4.8.5_2:
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc48

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===>   py27-pysal-1.10.0 depends on package: py27-numpy>=1.3 - found
===>   Returning to build of py27-pysal-1.10.0
===>   py27-pysal-1.10.0 depends on package: py27-scipy>=0.7 - not found
===>   Installing existing package /packages/All/py27-scipy-0.16.1.txz
[93i386-default-job-09] Installing py27-scipy-0.16.1...
[93i386-default-job-09] `-- Installing swig13-1.3.40_1...
[93i386-default-job-09] `-- Extracting swig13-1.3.40_1: .......... done
[93i386-default-job-09] Extracting py27-scipy-0.16.1: .......... done
===>   py27-pysal-1.10.0 depends on package: py27-scipy>=0.7 - found
===>   Returning to build of py27-pysal-1.10.0
===>   py27-pysal-1.10.0 depends on package: py27-setuptools27>0 - found
===>   py27-pysal-1.10.0 depends on file: /usr/local/bin/python2.7 - found
===>   py27-pysal-1.10.0 depends on executable: python2 - not found
===>   Installing existing package /packages/All/python2-2_3.txz
[93i386-default-job-09] Installing python2-2_3...
[93i386-default-job-09] Extracting python2-2_3: ...... done
===>   py27-pysal-1.10.0 depends on executable: python2 - found
===>   Returning to build of py27-pysal-1.10.0
===========================================================================
=======================<phase: lib-depends    >============================
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py27-pysal-1.10.0
Your version of PySAL is 187 days old.
There have likely been 1 new release(s).
Disable this check? [Y/n]Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "setup.py", line 16, in <module>
    from pysal.version import version as dversion
  File "pysal/__init__.py", line 156, in <module>
    check_version()
  File "pysal/__init__.py", line 137, in check_version
    query_yes_no("Disable this check? [Y/n]")
  File "pysal/__init__.py", line 111, in query_yes_no
    choice = raw_input().lower()
EOFError: EOF when reading a line
*** [do-configure] Error code 1

Stop in /usr/ports/science/py-pysal.