[package - 84amd64-default][math/blacs] Failed for blacs-1.7_23 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Sun Oct 12 12:32:37 UTC 2014
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: ports at FreeBSD.org
Last committer: danilo at FreeBSD.org
Ident: $FreeBSD: head/math/blacs/Makefile 369434 2014-09-28 03:41:24Z danilo $
Log URL: http://beefy2.isc.freebsd.org/data/84amd64-default/2014-10-12_06h14m07s/logs/blacs-1.7_23.log
Build URL: http://beefy2.isc.freebsd.org/build.html?mastername=84amd64-default&build=2014-10-12_06h14m07s
Log:
====>> Building math/blacs
build started at Sun Oct 12 12:31:52 UTC 2014
port directory: /usr/ports/math/blacs
building for: FreeBSD 84amd64-default-job-12 8.4-RELEASE-p16 FreeBSD 8.4-RELEASE-p16 amd64
maintained by: ports at FreeBSD.org
Makefile ident: $FreeBSD: head/math/blacs/Makefile 369434 2014-09-28 03:41:24Z danilo $
Poudriere version: 3.1-pre
Host OSVERSION: 1100027
Jail OSVERSION: 804000
---Begin Environment---
OSVERSION=804000
UNAME_v=FreeBSD 8.4-RELEASE-p16
UNAME_r=8.4-RELEASE-p16
FTP_PASSIVE_MODE=YES
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/84amd64-default/ref
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNAME=blacs-1.7_23
OLDPWD=/root
PWD=/usr/local/poudriere/data/.m/84amd64-default/ref/.p/pool
MASTERNAME=84amd64-default
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
---End Environment---
---Begin OPTIONS List---
---End OPTIONS List---
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/math/blacs/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/blacs/work HOME=/wrkdirs/usr/ports/math/blacs/work TMPDIR="/tmp" F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/math/blacs/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/blacs/work HOME=/wrkdirs/usr/ports/math/blacs/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/math/blacs/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/blacs/work HOME=/wrkdirs/usr/ports/math/blacs/work TMPDIR="/tmp" F77="gfortran48" FC="gfortran48" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc48" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc48" XDG_DATA_HOME=/wrkdirs/usr/ports/math/blacs/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/blacs/work HOME=/wrkdirs/usr/ports/math/blacs/work TMPDIR="/tmp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local LIBDIR="/usr/lib" CC="cc" CFLAGS="-O2 -pipe -fno-strict-aliasing" CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rp
ath=/usr/local/lib/gcc48 -L/usr/local/lib/gcc48 -B/usr/local/bin" LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fno-strict-aliasing" MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -o root -g wheel -m 555" BSD_INSTALL_LIB="install -s -o root -g wheel -m 444" BSD_INSTALL_SCRIPT="install -o root -g wheel -m 555" BSD_INSTALL_DATA="install -o root -g wheel -m 0644" BSD_INSTALL_MAN="install -o root -g wheel -m 444"
--End MAKE_ENV--
--PLIST_SUB--
OSREL=8.4
PREFIX=%D
LOCALBASE=/usr/local
RESETPREFIX=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
LIB32DIR=lib
DOCSDIR="share/doc/blacs"
EXAMPLESDIR="share/examples/blacs"
DATADIR="share/blacs"
WWWDIR="www/blacs"
ETCDIR="etc/blacs"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/blacs
DOCSDIR=/usr/local/share/doc/blacs
EXAMPLESDIR=/usr/local/share/examples/blacs
WWWDIR=/usr/local/www/blacs
ETCDIR=/usr/local/etc/blacs
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
#WITH_PKGNG=devel
# clean-restricted ran via poudriere.conf NO_RESTRICTED
#NO_RESTRICTED=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
=======================<phase: check-sanity >============================
===========================================================================
=======================<phase: pkg-depends >============================
===> blacs-1.7_23 depends on file: /usr/local/sbin/pkg - not found
===> Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===> Installing existing package /packages/All/pkg-1.3.8_3.txz
[84amd64-default-job-12] Installing pkg-1.3.8_3... done
Message for pkg-1.3.8_3:
If you are upgrading from the old package format, first run:
# pkg2ng
===> Returning to build of blacs-1.7_23
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> Fetching all distfiles required by blacs-1.7_23 for building
===========================================================================
=======================<phase: checksum >============================
===> Fetching all distfiles required by blacs-1.7_23 for building
=> SHA256 Checksum OK for blacs/mpiblacs.tgz.
=> SHA256 Checksum OK for blacs/blacstester.tgz.
=> SHA256 Checksum OK for blacs/mpiblacs-patch03.tgz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> Fetching all distfiles required by blacs-1.7_23 for building
===> Extracting for blacs-1.7_23
=> SHA256 Checksum OK for blacs/mpiblacs.tgz.
=> SHA256 Checksum OK for blacs/blacstester.tgz.
=> SHA256 Checksum OK for blacs/mpiblacs-patch03.tgz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for blacs-1.7_23
(/bin/cp /wrkdirs/usr/ports/math/blacs/work/BLACS/BMAKES/Bmake.MPI-LINUX /wrkdirs/usr/ports/math/blacs/work/BLACS/Bmake.inc)
===> Applying extra patch /usr/ports/math/blacs/files/Bmake.inc-mpich.diff
/bin/cp -r /wrkdirs/usr/ports/math/blacs/work/BLACS /wrkdirs/usr/ports/math/blacs/work/BLACS_shared
===========================================================================
=======================<phase: build-depends >============================
===> blacs-1.7_23 depends on executable: gfortran48 - not found
===> Verifying install for gfortran48 in /usr/ports/lang/gcc
===> Installing existing package /packages/All/gcc-4.8.3_2.txz
[84amd64-default-job-12] Installing indexinfo-0.2... done
[84amd64-default-job-12] Installing libiconv-1.14_4... done
[84amd64-default-job-12] Installing gettext-0.18.3.1_1... done
[84amd64-default-job-12] Installing binutils-2.24_1... done
[84amd64-default-job-12] Installing gcc-ecj-4.5... done
[84amd64-default-job-12] Installing gmp-5.1.3_2... done
[84amd64-default-job-12] Installing mpfr-3.1.2_2... done
[84amd64-default-job-12] Installing mpc-1.0.2_1... done
[84amd64-default-job-12] Installing gcc-4.8.3_2... done
Message for gcc-4.8.3_2:
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc48
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> Returning to build of blacs-1.7_23
===> blacs-1.7_23 depends on executable: gmake - not found
===> Verifying install for gmake in /usr/ports/devel/gmake
===> Installing existing package /packages/All/gmake-3.82_2.txz
[84amd64-default-job-12] Installing gmake-3.82_2... done
===> Returning to build of blacs-1.7_23
===> blacs-1.7_23 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===> blacs-1.7_23 depends on shared library: libmpich.so - not found
===> Verifying for libmpich.so in /usr/ports/net/mpich2
===> Installing existing package /packages/All/mpich2-1.5_2,5.txz
[84amd64-default-job-12] Installing bash-4.3.30... done
[84amd64-default-job-12] Installing javavmwrapper-2.5... done
[84amd64-default-job-12] Installing kbproto-1.0.6... done
[84amd64-default-job-12] Installing xproto-7.0.26... done
[84amd64-default-job-12] Installing libXau-1.0.8_2... done
[84amd64-default-job-12] Installing libXdmcp-1.1.1_2... done
[84amd64-default-job-12] Installing libpthread-stubs-0.3_6... done
[84amd64-default-job-12] Installing libxml2-2.9.1_1... done
[84amd64-default-job-12] Installing libxcb-1.10_2... done
[84amd64-default-job-12] Installing libX11-1.6.2_2,1... done
[84amd64-default-job-12] Installing libICE-1.0.9,1... done
[84amd64-default-job-12] Installing libSM-1.2.2_2,1... done
[84amd64-default-job-12] Installing libXt-1.1.4_2,1... done
[84amd64-default-job-12] Installing libexecinfo-1.1_3... done
[84amd64-default-job-12] Installing alsa-lib-1.0.28... done
[84amd64-default-job-12] Installing dejavu-2.34_4... done
fc-cache: not found
mkfontscale: not found
mkfontdir: not found
[84amd64-default-job-12] Installing expat-2.1.0_1... done
[84amd64-default-job-12] Installing freetype2-2.5.3_2... done
[84amd64-default-job-12] Installing fontconfig-2.11.0_3,1... done
Running fc-cache to build fontconfig cache...
/usr/local/share/fonts: skipping, no such directory
/usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs
/usr/local/lib/X11/fonts/dejavu: caching, new cache contents: 21 fonts, 0 dirs
/root/.local/share/fonts: skipping, no such directory
/root/.fonts: skipping, no such directory
/usr/local/share/fonts: skipping, no such directory
/usr/local/lib/X11/fonts: caching, new cache contents: 0 fonts, 1 dirs
/root/.local/share/fonts: skipping, no such directory
/root/.fonts: skipping, no such directory
/var/db/fontconfig: cleaning cache directory
/root/.cache/fontconfig: not cleaning non-existent cache directory
/root/.fontconfig: not cleaning non-existent cache directory
<snip>
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(4) to INTEGER(4)
blacstest.f:20817.45:
$ MEM(ERRIPTR), MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(4) to INTEGER(4)
blacstest.f:20831.37:
$ MEM(ERRIPTR), MEM(ERRDPTR), ISEED)
1
Warning: Type mismatch in argument 'ierr' at (1); passed COMPLEX(4) to INTEGER(4)
blacstest.f:20859.55:
CALL CBTCHECKIN( NFAIL, OUTNUM, MAXERR, NERR, MEM(ERRIPTR),
1
Warning: Type mismatch in argument 'ierr' at (1); passed COMPLEX(4) to INTEGER(4)
blacstest.f:582.35:
$ MEM(WORKPTR), WORKLEN)
1
Warning: Type mismatch in argument 'mem' at (1); passed INTEGER(4) to COMPLEX(4)
blacstest.f:14172.46:
$ MEM(ERRIPTR),MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:14176.46:
$ MEM(ERRIPTR),MEM(ERRDPTR),
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:14191.37:
$ MEM(ERRIPTR), MEM(ERRDPTR), ISEED)
1
Warning: Type mismatch in argument 'ierr' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:14219.55:
CALL ZBTCHECKIN( NFAIL, OUTNUM, MAXERR, NERR, MEM(ERRIPTR),
1
Warning: Type mismatch in argument 'ierr' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:594.50:
$ MEM(ISEEDPTR), MEM(WORKPTR),
1
Warning: Type mismatch in argument 'mem' at (1); passed INTEGER(4) to COMPLEX(8)
blacstest.f:18055.46:
$ MEM(ERRIPTR),MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:18060.46:
$ MEM(ERRIPTR),MEM(ERRDPTR),
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:18066.45:
$ MEM(ERRIPTR), MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:18080.37:
$ MEM(ERRIPTR), MEM(ERRDPTR), ISEED)
1
Warning: Type mismatch in argument 'ierr' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:18108.55:
CALL ZBTCHECKIN( NFAIL, OUTNUM, MAXERR, NERR, MEM(ERRIPTR),
1
Warning: Type mismatch in argument 'ierr' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:605.35:
$ MEM(WORKPTR), WORKLEN)
1
Warning: Type mismatch in argument 'mem' at (1); passed INTEGER(4) to COMPLEX(8)
blacstest.f:21454.46:
$ MEM(ERRIPTR),MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:21459.46:
$ MEM(ERRIPTR),MEM(ERRDPTR),
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:21465.45:
$ MEM(ERRIPTR), MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:21479.37:
$ MEM(ERRIPTR), MEM(ERRDPTR), ISEED)
1
Warning: Type mismatch in argument 'ierr' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:21507.55:
CALL ZBTCHECKIN( NFAIL, OUTNUM, MAXERR, NERR, MEM(ERRIPTR),
1
Warning: Type mismatch in argument 'ierr' at (1); passed COMPLEX(8) to INTEGER(4)
blacstest.f:615.35:
$ MEM(WORKPTR), WORKLEN)
1
Warning: Type mismatch in argument 'mem' at (1); passed INTEGER(4) to COMPLEX(8)
blacstest.f:150.24:
CALL RUNTESTS( MEM, MEMLEN, CMEM, CMEMSIZ, PREC, NPREC, OUTNUM,
1
Warning: Type mismatch in argument 'mem' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:13045.46:
$ MEM(ERRIPTR),MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:13049.46:
$ MEM(ERRIPTR),MEM(ERRDPTR),
1
Warning: Type mismatch in argument 'erribuf' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:13064.37:
$ MEM(ERRIPTR), MEM(ERRDPTR), ISEED)
1
Warning: Type mismatch in argument 'ierr' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:13092.55:
CALL DBTCHECKIN( NFAIL, OUTNUM, MAXERR, NERR, MEM(ERRIPTR),
1
Warning: Type mismatch in argument 'ierr' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:16423.46:
$ MEM(ERRIPTR),MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:16428.46:
$ MEM(ERRIPTR),MEM(ERRDPTR),
1
Warning: Type mismatch in argument 'erribuf' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:16434.45:
$ MEM(ERRIPTR), MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:16448.37:
$ MEM(ERRIPTR), MEM(ERRDPTR), ISEED)
1
Warning: Type mismatch in argument 'ierr' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:16476.55:
CALL DBTCHECKIN( NFAIL, OUTNUM, MAXERR, NERR, MEM(ERRIPTR),
1
Warning: Type mismatch in argument 'ierr' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:20160.46:
$ MEM(ERRIPTR),MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:20165.46:
$ MEM(ERRIPTR),MEM(ERRDPTR),
1
Warning: Type mismatch in argument 'erribuf' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:20171.45:
$ MEM(ERRIPTR), MEM(ERRDPTR))
1
Warning: Type mismatch in argument 'erribuf' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:20185.37:
$ MEM(ERRIPTR), MEM(ERRDPTR), ISEED)
1
Warning: Type mismatch in argument 'ierr' at (1); passed REAL(8) to INTEGER(4)
blacstest.f:20213.55:
CALL DBTCHECKIN( NFAIL, OUTNUM, MAXERR, NERR, MEM(ERRIPTR),
1
Warning: Type mismatch in argument 'ierr' at (1); passed REAL(8) to INTEGER(4)
make mpif.h
rm -f mpif.h
ln -s /usr/local/include/mpif.h mpif.h
gfortran48 -c -O -Wl,-rpath=/usr/local/lib/gcc48 btprim_MPI.f
gfortran48 -c tools.f
gfortran48 -O -Wl,-rpath=/usr/local/lib/gcc48 -o /wrkdirs/usr/ports/math/blacs/work/BLACS/TESTING/EXE/xFbtest_MPI-FreeBSD-0 blacstest.o btprim_MPI.o tools.o /wrkdirs/usr/ports/math/blacs/work/BLACS/LIB/blacsF77init_MPI-FreeBSD-0.a /wrkdirs/usr/ports/math/blacs/work/BLACS/LIB/blacs_MPI-FreeBSD-0.a /wrkdirs/usr/ports/math/blacs/work/BLACS/LIB/blacsF77init_MPI-FreeBSD-0.a /usr/local/lib//libmpich.a /usr/local/lib//libmpl.a -pthread
/usr/local/bin/ld: MPIR_Thread: TLS definition in /usr/local/lib//libmpich.a(initthread.o) section .tbss mismatches non-TLS reference in /usr/local/lib//libmpich.a(attr_get.o)
/usr/local/lib//libmpich.a: error adding symbols: Bad value
collect2: error: ld returned 1 exit status
*** Error code 1
Stop in /wrkdirs/usr/ports/math/blacs/work/BLACS/TESTING.
*** Error code 1
Stop in /wrkdirs/usr/ports/math/blacs/work/BLACS.
*** Error code 1
Stop in /usr/ports/math/blacs.
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