[package - head-amd64-default-ssp][science/cdo] Failed for cdo-1.6.4 in build

pkg-fallout at FreeBSD.org pkg-fallout at FreeBSD.org
Thu Aug 14 13:37:31 UTC 2014 

You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     sunpoet at FreeBSD.org
Last committer: sunpoet at FreeBSD.org
Ident:          $FreeBSD: head/science/cdo/Makefile 360525 2014-07-04 02:49:34Z sunpoet $
Log URL:        http://beefy4.isc.freebsd.org/data/head-amd64-default-ssp/2014-08-13_14h32m12s/logs/cdo-1.6.4.log
Build URL:      http://beefy4.isc.freebsd.org/build.html?mastername=head-amd64-default-ssp&build=2014-08-13_14h32m12s
Log:

====>> Building science/cdo
build started at Thu Aug 14 13:35:48 UTC 2014
port directory: /usr/ports/science/cdo
building for: FreeBSD pkg.FreeBSD.org 11.0-CURRENT FreeBSD 11.0-CURRENT r269897 amd64
maintained by: sunpoet at FreeBSD.org
Makefile ident:      $FreeBSD: head/science/cdo/Makefile 360525 2014-07-04 02:49:34Z sunpoet $
Poudriere version: 3.1-pre
Host OSVERSION: 1100027
Jail OSVERSION: 1100028




!!! Jail is newer than host. (Jail: 1100028, Host: 1100027) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



---Begin Environment---
OSVERSION=1100028
UNAME_v=FreeBSD 11.0-CURRENT r269897
UNAME_r=11.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
STATUS=1
SAVED_TERM=
MASTERMNT=/usr/local/poudriere/data/.m/head-amd64-default-ssp/ref
PKG_EXT=txz
FORCE_PACKAGE=yes
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin
POUDRIERE_BUILD_TYPE=bulk
PKGNG=1
PKGNAME=cdo-1.6.4
PKG_DELETE=/usr/local/sbin/pkg-static delete -y -f
PKG_ADD=/usr/local/sbin/pkg-static add
OLDPWD=/root
PWD=/usr/local/poudriere/data/.m/head-amd64-default-ssp/ref/.p/pool
MASTERNAME=head-amd64-default-ssp
USER=root
HOME=/root
POUDRIERE_VERSION=3.1-pre
LOCALBASE=/usr/local
PACKAGE_BUILDING=yes
PKG_VERSION=/.p/pkg-static version
PKG_BIN=/usr/local/sbin/pkg-static
---End Environment---

---Begin OPTIONS List---
===> The following configuration options are available for cdo-1.6.4:
     CGRIBEX=on
     HDF5=on: HDF-5 data format support
     JASPER=on: JPEG 2000 support via JasPer
     NETCDF=on: NetCDF data format support
     PROJ=on: PROJ.4 cartographic projections support
     SZIP=on: Szip compression support
     UDUNITS=on: Unidata units library (udunits) support
===> Use 'make config' to modify these settings
---End OPTIONS List---

--CONFIGURE_ARGS--
--disable-cgribex  --disable-data  --disable-extra  --disable-grib  --disable-ieg  --disable-service  --enable-cdi-lib  --program-transform-name=""  --with-zlib=/usr --with-cgribex=/usr/local --with-hdf5=/usr/local --with-jasper=/usr/local --with-netcdf=/usr/local --with-proj=/usr/local --with-szlib=/usr/local --with-udunits2=/usr/local --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work  HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work  HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work  HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" SHELL=/bin/sh CONFIG_SHELL=/bin/sh PATH=/usr/local/libexec/ccache:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/local/bin:/root/bin CCACHE_DIR="/root/.ccache" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=262144
--End CONFIGURE_ENV--

--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work  HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work  HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work  HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" NO_PIE=yes SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local  LOCALBASE=/usr/local  LIBDIR="/usr/lib"  CC="cc" CFLAGS="-O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing"  CPP="cpp" CPPFLAGS="-I/usr/local/include"  LDFLAGS=" -L/usr/local/lib -pthread -fstack-protector" LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing "  MANPREFIX="/usr/local" PATH=/usr/local/libexec/ccache:/sbin:/bin:/usr/sbin:/usr/bin:/usr/games:/usr/local/sbin:/usr/loc
 al/bin:/root/bin CCACHE_DIR="/root/.ccache" BSD_INSTALL_PROGRAM="install  -s -o root -g wheel -m 555"  BSD_INSTALL_LIB="install  -s -o root -g wheel -m 444"  BSD_INSTALL_SCRIPT="install  -o root -g wheel -m 555"  BSD_INSTALL_DATA="install  -o root -g wheel -m 444"  BSD_INSTALL_MAN="install  -o root -g wheel -m 444"
--End MAKE_ENV--

--PLIST_SUB--
CGRIBEX=""
NO_CGRIBEX="@comment
"
HDF5=""
NO_HDF5="@comment
"
JASPER=""
NO_JASPER="@comment
"
NETCDF=""
NO_NETCDF="@comment
"
PROJ=""
NO_PROJ="@comment
"
SZIP=""
NO_SZIP="@comment
"
UDUNITS=""
NO_UDUNITS="@comment
"
OSREL=11.0
PREFIX=%D
LOCALBASE=/usr/local
PORTDOCS=""
PORTEXAMPLES=""
PORTDATA=""
LIB32DIR=lib
DOCSDIR="share/doc/cdo"
EXAMPLESDIR="share/examples/cdo"
DATADIR="share/cdo"
WWWDIR="www/cdo"
ETCDIR="etc/cdo"
--End PLIST_SUB--

--SUB_LIST--
CGRIBEX=""
NO_CGRIBEX="@comment
"
HDF5=""
NO_HDF5="@comment
"
JASPER=""
NO_JASPER="@comment
"
NETCDF=""
NO_NETCDF="@comment
"
PROJ=""
NO_PROJ="@comment
"
SZIP=""
NO_SZIP="@comment
"
UDUNITS=""
NO_UDUNITS="@comment
"
PREFIX=/usr/local
LOCALBASE=/usr/local
DATADIR=/usr/local/share/cdo
DOCSDIR=/usr/local/share/doc/cdo
EXAMPLESDIR=/usr/local/share/examples/cdo
WWWDIR=/usr/local/www/cdo
ETCDIR=/usr/local/etc/cdo
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
WITH_CCACHE_BUILD=yes
CCACHE_DIR=/root/.ccache
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
#### /usr/local/etc/poudriere.d/make.conf ####
WITH_PKGNG=yes
#### /usr/local/etc/poudriere.d/ssp-make.conf ####
WITH_SSP_PORTS=yes
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
=======================<phase: check-sanity   >============================
===>  License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   cdo-1.6.4 depends on file: /usr/local/sbin/pkg - not found
===>    Verifying install for /usr/local/sbin/pkg in /usr/ports/ports-mgmt/pkg
===>   Installing existing package /packages/All/pkg-1.3.6.txz
[pkg.FreeBSD.org] Installing pkg-1.3.6... done
Message for pkg-1.3.6:
 If you are upgrading from the old package format, first run:

  # pkg2ng
===>   Returning to build of cdo-1.6.4
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by cdo-1.6.4 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by cdo-1.6.4 for building
=> SHA256 Checksum OK for cdo-1.6.4.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv2 accepted by the user
===> Fetching all distfiles required by cdo-1.6.4 for building
===>  Extracting for cdo-1.6.4
=> SHA256 Checksum OK for cdo-1.6.4.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for cdo-1.6.4
===>  Applying FreeBSD patches for cdo-1.6.4
===========================================================================
=======================<phase: build-depends  >============================
===>   cdo-1.6.4 depends on executable: gmake - not found
<snip>
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Mergegrid.o -MD -MP -MF .deps/cdo-Mergegrid.Tpo -c -o cdo-Mergegrid.o `test -f 'Mergegrid.c' || echo './'`Mergegrid.c
mv -f .deps/cdo-Mergegrid.Tpo .deps/cdo-Mergegrid.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Mergetime.o -MD -MP -MF .deps/cdo-Mergetime.Tpo -c -o cdo-Mergetime.o `test -f 'Mergetime.c' || echo './'`Mergetime.c
mv -f .deps/cdo-Mergetime.Tpo .deps/cdo-Mergetime.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Merstat.o -MD -MP -MF .deps/cdo-Merstat.Tpo -c -o cdo-Merstat.o `test -f 'Merstat.c' || echo './'`Merstat.c
mv -f .deps/cdo-Merstat.Tpo .deps/cdo-Merstat.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Monarith.o -MD -MP -MF .deps/cdo-Monarith.Tpo -c -o cdo-Monarith.o `test -f 'Monarith.c' || echo './'`Monarith.c
mv -f .deps/cdo-Monarith.Tpo .deps/cdo-Monarith.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Mrotuv.o -MD -MP -MF .deps/cdo-Mrotuv.Tpo -c -o cdo-Mrotuv.o `test -f 'Mrotuv.c' || echo './'`Mrotuv.c
mv -f .deps/cdo-Mrotuv.Tpo .deps/cdo-Mrotuv.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Mrotuvb.o -MD -MP -MF .deps/cdo-Mrotuvb.Tpo -c -o cdo-Mrotuvb.o `test -f 'Mrotuvb.c' || echo './'`Mrotuvb.c
mv -f .deps/cdo-Mrotuvb.Tpo .deps/cdo-Mrotuvb.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Ninfo.o -MD -MP -MF .deps/cdo-Ninfo.Tpo -c -o cdo-Ninfo.o `test -f 'Ninfo.c' || echo './'`Ninfo.c
mv -f .deps/cdo-Ninfo.Tpo .deps/cdo-Ninfo.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Nmltest.o -MD -MP -MF .deps/cdo-Nmltest.Tpo -c -o cdo-Nmltest.o `test -f 'Nmltest.c' || echo './'`Nmltest.c
mv -f .deps/cdo-Nmltest.Tpo .deps/cdo-Nmltest.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Output.o -MD -MP -MF .deps/cdo-Output.Tpo -c -o cdo-Output.o `test -f 'Output.c' || echo './'`Output.c
mv -f .deps/cdo-Output.Tpo .deps/cdo-Output.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Outputgmt.o -MD -MP -MF .deps/cdo-Outputgmt.Tpo -c -o cdo-Outputgmt.o `test -f 'Outputgmt.c' || echo './'`Outputgmt.c
mv -f .deps/cdo-Outputgmt.Tpo .deps/cdo-Outputgmt.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Pack.o -MD -MP -MF .deps/cdo-Pack.Tpo -c -o cdo-Pack.o `test -f 'Pack.c' || echo './'`Pack.c
mv -f .deps/cdo-Pack.Tpo .deps/cdo-Pack.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Pinfo.o -MD -MP -MF .deps/cdo-Pinfo.Tpo -c -o cdo-Pinfo.o `test -f 'Pinfo.c' || echo './'`Pinfo.c
mv -f .deps/cdo-Pinfo.Tpo .deps/cdo-Pinfo.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Pressure.o -MD -MP -MF .deps/cdo-Pressure.Tpo -c -o cdo-Pressure.o `test -f 'Pressure.c' || echo './'`Pressure.c
mv -f .deps/cdo-Pressure.Tpo .deps/cdo-Pressure.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Regres.o -MD -MP -MF .deps/cdo-Regres.Tpo -c -o cdo-Regres.o `test -f 'Regres.c' || echo './'`Regres.c
mv -f .deps/cdo-Regres.Tpo .deps/cdo-Regres.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Remap.o -MD -MP -MF .deps/cdo-Remap.Tpo -c -o cdo-Remap.o `test -f 'Remap.c' || echo './'`Remap.c
mv -f .deps/cdo-Remap.Tpo .deps/cdo-Remap.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Remapeta.o -MD -MP -MF .deps/cdo-Remapeta.Tpo -c -o cdo-Remapeta.o `test -f 'Remapeta.c' || echo './'`Remapeta.c
mv -f .deps/cdo-Remapeta.Tpo .deps/cdo-Remapeta.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Replace.o -MD -MP -MF .deps/cdo-Replace.Tpo -c -o cdo-Replace.o `test -f 'Replace.c' || echo './'`Replace.c
mv -f .deps/cdo-Replace.Tpo .deps/cdo-Replace.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Replacevalues.o -MD -MP -MF .deps/cdo-Replacevalues.Tpo -c -o cdo-Replacevalues.o `test -f 'Replacevalues.c' || echo './'`Replacevalues.c
mv -f .deps/cdo-Replacevalues.Tpo .deps/cdo-Replacevalues.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Rhopot.o -MD -MP -MF .deps/cdo-Rhopot.Tpo -c -o cdo-Rhopot.o `test -f 'Rhopot.c' || echo './'`Rhopot.c
mv -f .deps/cdo-Rhopot.Tpo .deps/cdo-Rhopot.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Rotuv.o -MD -MP -MF .deps/cdo-Rotuv.Tpo -c -o cdo-Rotuv.o `test -f 'Rotuv.c' || echo './'`Rotuv.c
mv -f .deps/cdo-Rotuv.Tpo .deps/cdo-Rotuv.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Runpctl.o -MD -MP -MF .deps/cdo-Runpctl.Tpo -c -o cdo-Runpctl.o `test -f 'Runpctl.c' || echo './'`Runpctl.c
mv -f .deps/cdo-Runpctl.Tpo .deps/cdo-Runpctl.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Runstat.o -MD -MP -MF .deps/cdo-Runstat.Tpo -c -o cdo-Runstat.o `test -f 'Runstat.c' || echo './'`Runstat.c
mv -f .deps/cdo-Runstat.Tpo .deps/cdo-Runstat.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Scatter.o -MD -MP -MF .deps/cdo-Scatter.Tpo -c -o cdo-Scatter.o `test -f 'Scatter.c' || echo './'`Scatter.c
mv -f .deps/cdo-Scatter.Tpo .deps/cdo-Scatter.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Seascount.o -MD -MP -MF .deps/cdo-Seascount.Tpo -c -o cdo-Seascount.o `test -f 'Seascount.c' || echo './'`Seascount.c
mv -f .deps/cdo-Seascount.Tpo .deps/cdo-Seascount.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Seaspctl.o -MD -MP -MF .deps/cdo-Seaspctl.Tpo -c -o cdo-Seaspctl.o `test -f 'Seaspctl.c' || echo './'`Seaspctl.c
mv -f .deps/cdo-Seaspctl.Tpo .deps/cdo-Seaspctl.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Seasstat.o -MD -MP -MF .deps/cdo-Seasstat.Tpo -c -o cdo-Seasstat.o `test -f 'Seasstat.c' || echo './'`Seasstat.c
mv -f .deps/cdo-Seasstat.Tpo .deps/cdo-Seasstat.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Selbox.o -MD -MP -MF .deps/cdo-Selbox.Tpo -c -o cdo-Selbox.o `test -f 'Selbox.c' || echo './'`Selbox.c
mv -f .deps/cdo-Selbox.Tpo .deps/cdo-Selbox.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Select.o -MD -MP -MF .deps/cdo-Select.Tpo -c -o cdo-Select.o `test -f 'Select.c' || echo './'`Select.c
mv -f .deps/cdo-Select.Tpo .deps/cdo-Select.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Seloperator.o -MD -MP -MF .deps/cdo-Seloperator.Tpo -c -o cdo-Seloperator.o `test -f 'Seloperator.c' || echo './'`Seloperator.c
mv -f .deps/cdo-Seloperator.Tpo .deps/cdo-Seloperator.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Selrec.o -MD -MP -MF .deps/cdo-Selrec.Tpo -c -o cdo-Selrec.o `test -f 'Selrec.c' || echo './'`Selrec.c
mv -f .deps/cdo-Selrec.Tpo .deps/cdo-Selrec.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Seltime.o -MD -MP -MF .deps/cdo-Seltime.Tpo -c -o cdo-Seltime.o `test -f 'Seltime.c' || echo './'`Seltime.c
mv -f .deps/cdo-Seltime.Tpo .deps/cdo-Seltime.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Selvar.o -MD -MP -MF .deps/cdo-Selvar.Tpo -c -o cdo-Selvar.o `test -f 'Selvar.c' || echo './'`Selvar.c
mv -f .deps/cdo-Selvar.Tpo .deps/cdo-Selvar.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Set.o -MD -MP -MF .deps/cdo-Set.Tpo -c -o cdo-Set.o `test -f 'Set.c' || echo './'`Set.c
mv -f .deps/cdo-Set.Tpo .deps/cdo-Set.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Setbox.o -MD -MP -MF .deps/cdo-Setbox.Tpo -c -o cdo-Setbox.o `test -f 'Setbox.c' || echo './'`Setbox.c
mv -f .deps/cdo-Setbox.Tpo .deps/cdo-Setbox.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Setgatt.o -MD -MP -MF .deps/cdo-Setgatt.Tpo -c -o cdo-Setgatt.o `test -f 'Setgatt.c' || echo './'`Setgatt.c
mv -f .deps/cdo-Setgatt.Tpo .deps/cdo-Setgatt.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Setgrid.o -MD -MP -MF .deps/cdo-Setgrid.Tpo -c -o cdo-Setgrid.o `test -f 'Setgrid.c' || echo './'`Setgrid.c
mv -f .deps/cdo-Setgrid.Tpo .deps/cdo-Setgrid.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Sethalo.o -MD -MP -MF .deps/cdo-Sethalo.Tpo -c -o cdo-Sethalo.o `test -f 'Sethalo.c' || echo './'`Sethalo.c
mv -f .deps/cdo-Sethalo.Tpo .deps/cdo-Sethalo.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Setmiss.o -MD -MP -MF .deps/cdo-Setmiss.Tpo -c -o cdo-Setmiss.o `test -f 'Setmiss.c' || echo './'`Setmiss.c
mv -f .deps/cdo-Setmiss.Tpo .deps/cdo-Setmiss.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Setpartab.o -MD -MP -MF .deps/cdo-Setpartab.Tpo -c -o cdo-Setpartab.o `test -f 'Setpartab.c' || echo './'`Setpartab.c
mv -f .deps/cdo-Setpartab.Tpo .deps/cdo-Setpartab.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Setrcaname.o -MD -MP -MF .deps/cdo-Setrcaname.Tpo -c -o cdo-Setrcaname.o `test -f 'Setrcaname.c' || echo './'`Setrcaname.c
mv -f .deps/cdo-Setrcaname.Tpo .deps/cdo-Setrcaname.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Settime.o -MD -MP -MF .deps/cdo-Settime.Tpo -c -o cdo-Settime.o `test -f 'Settime.c' || echo './'`Settime.c
mv -f .deps/cdo-Settime.Tpo .deps/cdo-Settime.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Setzaxis.o -MD -MP -MF .deps/cdo-Setzaxis.Tpo -c -o cdo-Setzaxis.o `test -f 'Setzaxis.c' || echo './'`Setzaxis.c
mv -f .deps/cdo-Setzaxis.Tpo .deps/cdo-Setzaxis.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Showinfo.o -MD -MP -MF .deps/cdo-Showinfo.Tpo -c -o cdo-Showinfo.o `test -f 'Showinfo.c' || echo './'`Showinfo.c
mv -f .deps/cdo-Showinfo.Tpo .deps/cdo-Showinfo.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Sinfo.o -MD -MP -MF .deps/cdo-Sinfo.Tpo -c -o cdo-Sinfo.o `test -f 'Sinfo.c' || echo './'`Sinfo.c
mv -f .deps/cdo-Sinfo.Tpo .deps/cdo-Sinfo.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Smooth9.o -MD -MP -MF .deps/cdo-Smooth9.Tpo -c -o cdo-Smooth9.o `test -f 'Smooth9.c' || echo './'`Smooth9.c
mv -f .deps/cdo-Smooth9.Tpo .deps/cdo-Smooth9.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Sort.o -MD -MP -MF .deps/cdo-Sort.Tpo -c -o cdo-Sort.o `test -f 'Sort.c' || echo './'`Sort.c
mv -f .deps/cdo-Sort.Tpo .deps/cdo-Sort.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Sorttimestamp.o -MD -MP -MF .deps/cdo-Sorttimestamp.Tpo -c -o cdo-Sorttimestamp.o `test -f 'Sorttimestamp.c' || echo './'`Sorttimestamp.c
mv -f .deps/cdo-Sorttimestamp.Tpo .deps/cdo-Sorttimestamp.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Specinfo.o -MD -MP -MF .deps/cdo-Specinfo.Tpo -c -o cdo-Specinfo.o `test -f 'Specinfo.c' || echo './'`Specinfo.c
mv -f .deps/cdo-Specinfo.Tpo .deps/cdo-Specinfo.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Spectral.o -MD -MP -MF .deps/cdo-Spectral.Tpo -c -o cdo-Spectral.o `test -f 'Spectral.c' || echo './'`Spectral.c
mv -f .deps/cdo-Spectral.Tpo .deps/cdo-Spectral.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Spectrum.o -MD -MP -MF .deps/cdo-Spectrum.Tpo -c -o cdo-Spectrum.o `test -f 'Spectrum.c' || echo './'`Spectrum.c
mv -f .deps/cdo-Spectrum.Tpo .deps/cdo-Spectrum.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Split.o -MD -MP -MF .deps/cdo-Split.Tpo -c -o cdo-Split.o `test -f 'Split.c' || echo './'`Split.c
mv -f .deps/cdo-Split.Tpo .deps/cdo-Split.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Splitrec.o -MD -MP -MF .deps/cdo-Splitrec.Tpo -c -o cdo-Splitrec.o `test -f 'Splitrec.c' || echo './'`Splitrec.c
mv -f .deps/cdo-Splitrec.Tpo .deps/cdo-Splitrec.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Splitsel.o -MD -MP -MF .deps/cdo-Splitsel.Tpo -c -o cdo-Splitsel.o `test -f 'Splitsel.c' || echo './'`Splitsel.c
mv -f .deps/cdo-Splitsel.Tpo .deps/cdo-Splitsel.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Splittime.o -MD -MP -MF .deps/cdo-Splittime.Tpo -c -o cdo-Splittime.o `test -f 'Splittime.c' || echo './'`Splittime.c
mv -f .deps/cdo-Splittime.Tpo .deps/cdo-Splittime.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Splityear.o -MD -MP -MF .deps/cdo-Splityear.Tpo -c -o cdo-Splityear.o `test -f 'Splityear.c' || echo './'`Splityear.c
mv -f .deps/cdo-Splityear.Tpo .deps/cdo-Splityear.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-SSOpar.o -MD -MP -MF .deps/cdo-SSOpar.Tpo -c -o cdo-SSOpar.o `test -f 'SSOpar.c' || echo './'`SSOpar.c
mv -f .deps/cdo-SSOpar.Tpo .deps/cdo-SSOpar.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Subtrend.o -MD -MP -MF .deps/cdo-Subtrend.Tpo -c -o cdo-Subtrend.o `test -f 'Subtrend.c' || echo './'`Subtrend.c
mv -f .deps/cdo-Subtrend.Tpo .deps/cdo-Subtrend.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Tee.o -MD -MP -MF .deps/cdo-Tee.Tpo -c -o cdo-Tee.o `test -f 'Tee.c' || echo './'`Tee.c
mv -f .deps/cdo-Tee.Tpo .deps/cdo-Tee.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Templates.o -MD -MP -MF .deps/cdo-Templates.Tpo -c -o cdo-Templates.o `test -f 'Templates.c' || echo './'`Templates.c
mv -f .deps/cdo-Templates.Tpo .deps/cdo-Templates.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Test.o -MD -MP -MF .deps/cdo-Test.Tpo -c -o cdo-Test.o `test -f 'Test.c' || echo './'`Test.c
mv -f .deps/cdo-Test.Tpo .deps/cdo-Test.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Tests.o -MD -MP -MF .deps/cdo-Tests.Tpo -c -o cdo-Tests.o `test -f 'Tests.c' || echo './'`Tests.c
mv -f .deps/cdo-Tests.Tpo .deps/cdo-Tests.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Timcount.o -MD -MP -MF .deps/cdo-Timcount.Tpo -c -o cdo-Timcount.o `test -f 'Timcount.c' || echo './'`Timcount.c
mv -f .deps/cdo-Timcount.Tpo .deps/cdo-Timcount.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Timpctl.o -MD -MP -MF .deps/cdo-Timpctl.Tpo -c -o cdo-Timpctl.o `test -f 'Timpctl.c' || echo './'`Timpctl.c
mv -f .deps/cdo-Timpctl.Tpo .deps/cdo-Timpctl.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Timselpctl.o -MD -MP -MF .deps/cdo-Timselpctl.Tpo -c -o cdo-Timselpctl.o `test -f 'Timselpctl.c' || echo './'`Timselpctl.c
mv -f .deps/cdo-Timselpctl.Tpo .deps/cdo-Timselpctl.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Timselstat.o -MD -MP -MF .deps/cdo-Timselstat.Tpo -c -o cdo-Timselstat.o `test -f 'Timselstat.c' || echo './'`Timselstat.c
mv -f .deps/cdo-Timselstat.Tpo .deps/cdo-Timselstat.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Timsort.o -MD -MP -MF .deps/cdo-Timsort.Tpo -c -o cdo-Timsort.o `test -f 'Timsort.c' || echo './'`Timsort.c
mv -f .deps/cdo-Timsort.Tpo .deps/cdo-Timsort.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Timstat.o -MD -MP -MF .deps/cdo-Timstat.Tpo -c -o cdo-Timstat.o `test -f 'Timstat.c' || echo './'`Timstat.c
mv -f .deps/cdo-Timstat.Tpo .deps/cdo-Timstat.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Timstat2.o -MD -MP -MF .deps/cdo-Timstat2.Tpo -c -o cdo-Timstat2.o `test -f 'Timstat2.c' || echo './'`Timstat2.c
mv -f .deps/cdo-Timstat2.Tpo .deps/cdo-Timstat2.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Timstat3.o -MD -MP -MF .deps/cdo-Timstat3.Tpo -c -o cdo-Timstat3.o `test -f 'Timstat3.c' || echo './'`Timstat3.c
mv -f .deps/cdo-Timstat3.Tpo .deps/cdo-Timstat3.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Tinfo.o -MD -MP -MF .deps/cdo-Tinfo.Tpo -c -o cdo-Tinfo.o `test -f 'Tinfo.c' || echo './'`Tinfo.c
mv -f .deps/cdo-Tinfo.Tpo .deps/cdo-Tinfo.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Tocomplex.o -MD -MP -MF .deps/cdo-Tocomplex.Tpo -c -o cdo-Tocomplex.o `test -f 'Tocomplex.c' || echo './'`Tocomplex.c
mv -f .deps/cdo-Tocomplex.Tpo .deps/cdo-Tocomplex.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Transpose.o -MD -MP -MF .deps/cdo-Transpose.Tpo -c -o cdo-Transpose.o `test -f 'Transpose.c' || echo './'`Transpose.c
mv -f .deps/cdo-Transpose.Tpo .deps/cdo-Transpose.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Trend.o -MD -MP -MF .deps/cdo-Trend.Tpo -c -o cdo-Trend.o `test -f 'Trend.c' || echo './'`Trend.c
mv -f .deps/cdo-Trend.Tpo .deps/cdo-Trend.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Trms.o -MD -MP -MF .deps/cdo-Trms.Tpo -c -o cdo-Trms.o `test -f 'Trms.c' || echo './'`Trms.c
mv -f .deps/cdo-Trms.Tpo .deps/cdo-Trms.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Tstepcount.o -MD -MP -MF .deps/cdo-Tstepcount.Tpo -c -o cdo-Tstepcount.o `test -f 'Tstepcount.c' || echo './'`Tstepcount.c
mv -f .deps/cdo-Tstepcount.Tpo .deps/cdo-Tstepcount.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Vardup.o -MD -MP -MF .deps/cdo-Vardup.Tpo -c -o cdo-Vardup.o `test -f 'Vardup.c' || echo './'`Vardup.c
mv -f .deps/cdo-Vardup.Tpo .deps/cdo-Vardup.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Vargen.o -MD -MP -MF .deps/cdo-Vargen.Tpo -c -o cdo-Vargen.o `test -f 'Vargen.c' || echo './'`Vargen.c
mv -f .deps/cdo-Vargen.Tpo .deps/cdo-Vargen.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Varrms.o -MD -MP -MF .deps/cdo-Varrms.Tpo -c -o cdo-Varrms.o `test -f 'Varrms.c' || echo './'`Varrms.c
mv -f .deps/cdo-Varrms.Tpo .deps/cdo-Varrms.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Vertint.o -MD -MP -MF .deps/cdo-Vertint.Tpo -c -o cdo-Vertint.o `test -f 'Vertint.c' || echo './'`Vertint.c
mv -f .deps/cdo-Vertint.Tpo .deps/cdo-Vertint.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Vertstat.o -MD -MP -MF .deps/cdo-Vertstat.Tpo -c -o cdo-Vertstat.o `test -f 'Vertstat.c' || echo './'`Vertstat.c
mv -f .deps/cdo-Vertstat.Tpo .deps/cdo-Vertstat.Po
cc -DHAVE_CONFIG_H -I.  -I../libcdi/src -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/local/include -I/usr/include -I/usr/local/include -I/usr/local/include -I/usr/local/include  -O2 -pipe  -DPTHREAD_MUTEXATTR_CONDATTR -fstack-protector -fno-strict-aliasing  -D_THREAD_SAFE  -MT cdo-Vertwind.o -MD -MP -MF .deps/cdo-Vertwind.Tpo -c -o cdo-Vertwind.o `test -f 'Vertwind.c' || echo './'`Vertwind.c
Instruction does not dominate all uses!
  %arrayidx = getelementptr inbounds double* %9, i64 %indvars.iv765
  %bc828 = bitcast double* %arrayidx to i8*
Instruction does not dominate all uses!
  %arrayidx = getelementptr inbounds double* %9, i64 %indvars.iv765
  %bc = bitcast double* %arrayidx to i8*
Broken module found, compilation aborted!
Stack dump:
0.	Program arguments: /usr/bin/cc -cc1 -triple x86_64-unknown-freebsd11.0 -emit-obj -disable-free -main-file-name Vertwind.c -mrelocation-model static -mdisable-fp-elim -relaxed-aliasing -masm-verbose -mconstructor-aliases -munwind-tables -target-cpu x86-64 -coverage-file /root/.ccache/d/a/2fc3f2a8ae5f0f814af04155f51ade-92760.o.tmp.pkg.FreeBSD.org.89912 -resource-dir /usr/bin/../lib/clang/3.4.1 -D HAVE_CONFIG_H -D PTHREAD_MUTEXATTR_CONDATTR -D _THREAD_SAFE -I . -I ../libcdi/src -I /usr/local/include -I /usr/local/include -I /usr/local/include -I /usr/local/include -I /usr/include -I /usr/local/include -I /usr/local/include -I /usr/local/include -O2 -fdebug-compilation-dir /wrkdirs/usr/ports/science/cdo/work/cdo-1.6.4/src -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fobjc-runtime=gnustep -fdiagnostics-show-option -vectorize-loops -vectorize-slp -o /root/.ccache/d/a/2fc3f2a8ae5f0f814af04155f51ade-92760.o.tmp.pkg.FreeBSD.org.89912 -x c Vertwind.c 
1.	<eof> parser at end of file
2.	Code generation
3.	Running pass 'Function Pass Manager' on module 'Vertwind.c'.
4.	Running pass 'Module Verifier' on function '@Vertwind'
cc: error: unable to execute command: Abort trap (core dumped)
cc: error: clang frontend command failed due to signal (use -v to see invocation)
FreeBSD clang version 3.4.1 (tags/RELEASE_34/dot1-final 208032) 20140512
Target: x86_64-unknown-freebsd11.0
Thread model: posix
cc: note: diagnostic msg: PLEASE submit a bug report to http://llvm.org/bugs/ and include the crash backtrace, preprocessed source, and associated run script.
cc: note: diagnostic msg: 
********************

PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
cc: note: diagnostic msg: /tmp/Vertwind-1e25f5.c
cc: note: diagnostic msg: /tmp/Vertwind-1e25f5.sh
cc: note: diagnostic msg: 

********************
gmake[3]: *** [cdo-Vertwind.o] Error 254
gmake[3]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.4/src'
gmake[2]: *** [all] Error 2
gmake[2]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.4/src'
gmake[1]: *** [all-recursive] Error 1
gmake[1]: Leaving directory `/wrkdirs/usr/ports/science/cdo/work/cdo-1.6.4'
*** Error code 1

Stop.
make: stopped in /usr/ports/science/cdo

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