[package - 130releng-armv7-quarterly][biology/ncbi-blast+] Failed for ncbi-blast+-2.11.0 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Sun Feb 21 14:20:09 UTC 2021
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: jwb at FreeBSD.org
Last committer: jwb at FreeBSD.org
Ident: $FreeBSD: branches/2021Q1/biology/ncbi-blast+/Makefile 555505 2020-11-16 18:25:03Z jwb $
Log URL: http://beefy12.nyi.freebsd.org/data/130releng-armv7-quarterly/565842/logs/ncbi-blast+-2.11.0.log
Build URL: http://beefy12.nyi.freebsd.org/build.html?mastername=130releng-armv7-quarterly&build=565842
Log:
=>> Building biology/ncbi-blast+
build started at Sun Feb 21 14:05:16 UTC 2021
port directory: /usr/ports/biology/ncbi-blast+
package name: ncbi-blast+-2.11.0
building for: FreeBSD 130releng-armv7-quarterly-job-04 13.0-BETA2 FreeBSD 13.0-BETA2 1300139 arm
maintained by: jwb at FreeBSD.org
Makefile ident: $FreeBSD: branches/2021Q1/biology/ncbi-blast+/Makefile 555505 2020-11-16 18:25:03Z jwb $
Poudriere version: 3.2.8-8-gaf08dbda
Host OSVERSION: 1300134
Jail OSVERSION: 1300139
Job Id: 04
!!! Jail is newer than host. (Jail: 1300139, Host: 1300134) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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jwb at FreeBSD.org
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=======================<phase: check-sanity >============================
===> License PD accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> ncbi-blast+-2.11.0 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.16.1.txz
[130releng-armv7-quarterly-job-04] Installing pkg-1.16.1...
[130releng-armv7-quarterly-job-04] Extracting pkg-1.16.1: .......... done
===> ncbi-blast+-2.11.0 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of ncbi-blast+-2.11.0
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License PD accepted by the user
===> Fetching all distfiles required by ncbi-blast+-2.11.0 for building
===========================================================================
=======================<phase: checksum >============================
===> License PD accepted by the user
===> Fetching all distfiles required by ncbi-blast+-2.11.0 for building
<snip>
Configuration header: /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc/ncbiconf_unix.h
To build everything: cd /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build && /usr/local/bin/gmake all_r
or simply run /usr/local/bin/gmake in the current directory
******* CONFIGURATION SUCCESSFUL *******
===========================================================================
=======================<phase: build >============================
===> Building for ncbi-blast+-2.11.0
gmake[1]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++'
if test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.flat; then \
cd /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build && gmake -f Makefile.flat; \
elif test -s ""; then \
cd /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build && gmake -w all_p; \
else \
cd /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build && gmake -w all_r; \
fi
gmake[2]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build'
Build session ID: e77ddb06-744e-11eb-0000-000000000000
/bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/ctools/Makefile.in`
test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/ctools/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/ctools/Makefile.in
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT ctools/Makefile
config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/ctools/Makefile
/bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sra/Makefile.in`
test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sra/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sra/Makefile.in
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT sra/Makefile
config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/sra/Makefile
/bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/gui/Makefile.in`
test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/gui/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/gui/Makefile.in
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT gui/Makefile
config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/gui/Makefile
/bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sample/Makefile.in`
test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sample/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/sample/Makefile.in
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT sample/Makefile
config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/sample/Makefile
/bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/internal/Makefile.in`
test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/internal/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/internal/Makefile.in
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT internal/Makefile
config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/internal/Makefile
/usr/local/bin/gmake -C corelib -w all_r || exit 5
gmake[3]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[4]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
/bin/mkdir -p `/usr/bin/dirname /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/test/Makefile.in`
test -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/test/Makefile.in || /bin/cp -p /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.in.skel /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/test/Makefile.in
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/scripts/common/impl/update_configurable.sh /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT test/Makefile
config.status: creating /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib/test/Makefile
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
/usr/local/bin/gmake[5] (Makefile.precompile): Nothing to be done for `all'.
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib TMPL=corelib -w export-headers
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[5]: Nothing to be done for 'export-headers'.
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib TMPL=test_mt -w export-headers
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[5]: Nothing to be done for 'export-headers'.
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[5]: *** No rule to make target '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/status/Boost.Test.Included.enabled', needed by 'requirements'. Stop.
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
NOTE: skipping project "test_boost" due to unmet requirements
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
/usr/local/bin/gmake -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.lib.tmpl srcdir=/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib TMPL=corelib -w all
In file included from /usr/local/lib/gcc9/include/c++/vector:72,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbidiag.hpp:44,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbidbg.hpp:47,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbimisc.hpp:38,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbiexpt.hpp:42,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/tempstr.hpp:38,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbistr.hpp:39,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbistd.hpp:37,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbithr_conf.hpp:38,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbimtx.hpp:62,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbireg.hpp:49,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/metareg.hpp:38,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/metareg.cpp:35:
/usr/local/lib/gcc9/include/c++/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ncbi::CMetaRegistry::SEntry&}; _Tp = ncbi::CMetaRegistry::SEntry; _Alloc = std::allocator<ncbi::CMetaRegistry::SEntry>]':
/usr/local/lib/gcc9/include/c++/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ncbi::CMetaRegistry::SEntry>::iterator' {aka '__gnu_cxx::__normal_iterator<ncbi::CMetaRegistry::SEntry*, std::vector<ncbi::CMetaRegistry::SEntry> >'} changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/local/lib/gcc9/include/c++/vector:67,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbidiag.hpp:44,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbidbg.hpp:47,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbimisc.hpp:38,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbiexpt.hpp:42,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/tempstr.hpp:38,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbistr.hpp:39,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbistd.hpp:37,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbithr_conf.hpp:38,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbimtx.hpp:62,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/ncbireg.hpp:49,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include/corelib/metareg.hpp:38,
from /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/metareg.cpp:35:
/usr/local/lib/gcc9/include/c++/bits/stl_vector.h: In member function 'const ncbi::CMetaRegistry::SEntry& ncbi::CMetaRegistry::x_Load(const string&, ncbi::CMetaRegistry::ENameStyle, ncbi::CMetaRegistry::TFlags, ncbi::IRegistry::TFlags, ncbi::IRWRegistry*, const string&, ncbi::CMetaRegistry::ENameStyle, ncbi::CMetaRegistry::SEntry&, const string&)':
/usr/local/lib/gcc9/include/c++/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ncbi::CMetaRegistry::SEntry*, std::vector<ncbi::CMetaRegistry::SEntry> >' changed in GCC 7.1
1195 | _M_realloc_insert(end(), __x);
| ^~~~~~~~~~~~~~~~~
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp: In constructor 'ncbi::CCpuFeatures::InstructionSet::InstructionSet()':
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1554:103: error: impossible constraint in 'asm'
1554 | asm volatile("cpuid" : "=a" (r[0]), "=b" (r[1]), "=c" (r[2]), "=d" (r[3]) : "a" (func_id));
| ^
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1561:117: error: impossible constraint in 'asm'
1561 | asm volatile("cpuid" : "=a" (r[0]), "=b" (r[1]), "=c" (r[2]), "=d" (r[3]) : "a" (func_id), "c" (sub_id));
| ^
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1554:103: error: impossible constraint in 'asm'
1554 | asm volatile("cpuid" : "=a" (r[0]), "=b" (r[1]), "=c" (r[2]), "=d" (r[3]) : "a" (func_id));
| ^
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp:1561:117: error: impossible constraint in 'asm'
1561 | asm volatile("cpuid" : "=a" (r[0]), "=b" (r[1]), "=c" (r[2]), "=d" (r[3]) : "a" (func_id), "c" (sub_id));
| ^
gmake[5]: *** [/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/Makefile.rules:88: ncbi_system.o] Error 1
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_fast.cpp.
Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/request_status.cpp.
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Updating dependency information for /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_os_unix.cpp.
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_os_unix.cpp -o ncbi_os_unix.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/blob_storage.cpp -o blob_storage.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ddumpable.cpp -o ddumpable.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/env_reg.cpp -o env_reg.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/metareg.cpp -o metareg.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_config.cpp -o ncbi_config.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_param.cpp -o ncbi_param.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_process.cpp -o ncbi_process.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_safe_static.cpp -o ncbi_safe_static.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_signal.cpp -o ncbi_signal.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_stack.cpp -o ncbi_stack.o
/usr/local/bin/g++9 -std=gnu++14 -c -Wall -Wno-format-y2k -pthread -fopenmp -O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_MT -D_REENTRANT -D_THREAD_SAFE -D__RUNETYPE_INTERNAL -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/inc -I/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/include -DNCBI_BUILD_SESSION_ID=e77ddb06-744e-11eb-0000-000000000000 /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/corelib/ncbi_system.cpp -o ncbi_system.o
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
FAILED: src/corelib/Makefile.corelib.lib
gmake[5]: Entering directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
/bin/rm -f libxncbi.a .xncbi.dep .libxncbi.a.stamp
/bin/rm -f /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/lib/libxncbi.a /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/status/.xncbi.dep \
/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/lib/libxncbi-static.a /wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/status/.xncbi-static.dep
gmake[5]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[4]: *** [/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.meta_l:323: all.nonusr] Error 2
gmake[4]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[3]: *** [/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.meta_l:281: all_l.real] Error 2
gmake[3]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build/corelib'
gmake[2]: *** [/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/src/build-system/Makefile.meta_r:41: all_r.real] Error 5
gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++/ReleaseMT/build'
gmake[1]: *** [Makefile:24: all] Error 2
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/ncbi-blast+/work/ncbi-blast-2.11.0+-src/c++'
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/ncbi-blast+
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