[package - 121amd64-default][net/openmpi3] Failed for openmpi3-3.1.6 in lib-depends
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Sat Jan 9 01:47:55 UTC 2021
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: danilo at FreeBSD.org
Last committer: danilo at FreeBSD.org
Ident: $FreeBSD: head/net/openmpi3/Makefile 552500 2020-10-16 11:25:29Z danilo $
Log URL: http://beefy6.nyi.freebsd.org/data/121amd64-default/560826/logs/openmpi3-3.1.6.log
Build URL: http://beefy6.nyi.freebsd.org/build.html?mastername=121amd64-default&build=560826
Log:
=>> Building net/openmpi3
build started at Sat Jan 9 01:47:35 UTC 2021
port directory: /usr/ports/net/openmpi3
package name: openmpi3-3.1.6
building for: FreeBSD 121amd64-default-job-07 12.1-RELEASE-p12 FreeBSD 12.1-RELEASE-p12 amd64
maintained by: danilo at FreeBSD.org
Makefile ident: $FreeBSD: head/net/openmpi3/Makefile 552500 2020-10-16 11:25:29Z danilo $
Poudriere version: 3.2.8-8-gaf08dbda
Host OSVERSION: 1300121
Jail OSVERSION: 1201000
Job Id: 07
---Begin Environment---
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OSVERSION=1201000
UNAME_v=FreeBSD 12.1-RELEASE-p12
UNAME_r=12.1-RELEASE-p12
BLOCKSIZE=K
MAIL=/var/mail/root
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HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
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LIBEXECPREFIX=/usr/local/libexec/poudriere
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PWD=/usr/local/poudriere/data/.m/121amd64-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
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POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
DEPENDS_ARGS=
MAKE_ARGS=
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
===> The following configuration options are available for openmpi3-3.1.6:
DEBUG=off: Build with debugging support
IPV6=on: IPv6 protocol support
SLURM=on: Enable SLURM support
TORQUE=off: Enable Torque support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
danilo at FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--prefix=/usr/local/mpi/openmpi3 --mandir=/usr/local/mpi/openmpi3/man --program-prefix= --with-hwloc=external --with-libltdl --enable-mpi-fortran=usempi --enable-mpi-cxx --enable-cxx-exceptions --with-libevent=external --enable-mca-no-build=verbs,btl_openib,oob_ud --without-verbs --with-wrapper-ldflags=-Wl,-rpath=-Wl,-rpath=/usr/local/lib/gcc9 ompi_cv_fortran_ignore_tkr_data=0 --disable-debug --enable-ipv6 --with-slurm --without-tm
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/net/openmpi3/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/net/openmpi3/work HOME=/wrkdirs/usr/ports/net/openmpi3/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/net/openmpi3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/net/openmpi3/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/net/openmpi3/work HOME=/wrkdirs/usr/ports/net/openmpi3/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/net/openmpi3/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fn
o-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " MANPREFIX="/usr/local/mpi/openmpi3" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
MPIBASE=mpi MPIDIR=mpi/openmpi3 DEBUG="@comment " NO_DEBUG="" IPV6="" NO_IPV6="@comment " SLURM="" NO_SLURM="@comment " TORQUE="@comment " NO_TORQUE="" OSREL=12.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.32.0 PERL_VER=5.32 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.32 DOCSDIR="share/doc/openmpi" EXAMPLESDIR="share/examples/openmpi" DATADIR="share/openmpi" WWWDIR="www/openmpi" ETCDIR="etc/openmpi"
--End PLIST_SUB--
--SUB_LIST--
DEBUG="@comment " NO_DEBUG="" IPV6="" NO_IPV6="@comment " SLURM="" NO_SLURM="@comment " TORQUE="@comment " NO_TORQUE="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/openmpi DOCSDIR=/usr/local/share/doc/openmpi EXAMPLESDIR=/usr/local/share/examples/openmpi WWWDIR=/usr/local/www/openmpi ETCDIR=/usr/local/etc/openmpi
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
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CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=yes
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=yes
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=yes
CC_OUTPUT_921dbbb2_f00456e5=yes
CC_OUTPUT_921dbbb2_65ad290d=yes
CC_OUTPUT_921dbbb2_f2776b26=yes
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=yes
CC_OUTPUT_921dbbb2_160933ec=yes
CC_OUTPUT_921dbbb2_fb62803b=yes
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ARCH=amd64
OPSYS=FreeBSD
_OSRELEASE=12.1-RELEASE-p12
OSREL=12.1
OSVERSION=1201000
PYTHONBASE=/usr/local
HAVE_COMPAT_IA32_KERN=YES
CONFIGURE_MAX_CMD_LEN=524288
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 33554432
stack size (kbytes, -s) 524288
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 1024
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===> License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> openmpi3-3.1.6 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.16.1.txz
[121amd64-default-job-07] Installing pkg-1.16.1...
[121amd64-default-job-07] Extracting pkg-1.16.1: .......... done
===> openmpi3-3.1.6 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of openmpi3-3.1.6
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by openmpi3-3.1.6 for building
===========================================================================
=======================<phase: checksum >============================
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by openmpi3-3.1.6 for building
=> SHA256 Checksum OK for openmpi-3.1.6.tar.bz2.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by openmpi3-3.1.6 for building
===> Extracting for openmpi3-3.1.6
=> SHA256 Checksum OK for openmpi-3.1.6.tar.bz2.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for openmpi3-3.1.6
===> Applying FreeBSD patches for openmpi3-3.1.6 from /usr/ports/net/openmpi3/files
===========================================================================
=======================<phase: build-depends >============================
===> openmpi3-3.1.6 depends on executable: gfortran9 - not found
===> Installing existing package /packages/All/gcc9-9.3.0_1.txz
[121amd64-default-job-07] Installing gcc9-9.3.0_1...
[121amd64-default-job-07] `-- Installing binutils-2.33.1_4,1...
[121amd64-default-job-07] | `-- Installing gettext-runtime-0.21...
[121amd64-default-job-07] | | `-- Installing indexinfo-0.3.1...
[121amd64-default-job-07] | | `-- Extracting indexinfo-0.3.1: .... done
[121amd64-default-job-07] | `-- Extracting gettext-runtime-0.21: .......... done
[121amd64-default-job-07] `-- Extracting binutils-2.33.1_4,1: .......... done
[121amd64-default-job-07] `-- Installing gmp-6.2.1...
[121amd64-default-job-07] `-- Extracting gmp-6.2.1: .......... done
[121amd64-default-job-07] `-- Installing mpc-1.1.0_2...
[121amd64-default-job-07] | `-- Installing mpfr-4.1.0...
[121amd64-default-job-07] | `-- Extracting mpfr-4.1.0: .......... done
[121amd64-default-job-07] `-- Extracting mpc-1.1.0_2: ......... done
[121amd64-default-job-07] Extracting gcc9-9.3.0_1: .......... done
=====
Message from gcc9-9.3.0_1:
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc9
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> openmpi3-3.1.6 depends on executable: gfortran9 - found
===> Returning to build of openmpi3-3.1.6
===> openmpi3-3.1.6 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_2.txz
[121amd64-default-job-07] Installing gmake-4.3_2...
[121amd64-default-job-07] Extracting gmake-4.3_2: .......... done
===> openmpi3-3.1.6 depends on package: gmake>=4.3 - found
===> Returning to build of openmpi3-3.1.6
===> openmpi3-3.1.6 depends on package: pkgconf>=1.3.0_1 - not found
===> Installing existing package /packages/All/pkgconf-1.7.3,1.txz
[121amd64-default-job-07] Installing pkgconf-1.7.3,1...
[121amd64-default-job-07] Extracting pkgconf-1.7.3,1: .......... done
===> openmpi3-3.1.6 depends on package: pkgconf>=1.3.0_1 - found
===> Returning to build of openmpi3-3.1.6
===> openmpi3-3.1.6 depends on file: /usr/local/bin/as - found
===> openmpi3-3.1.6 depends on package: perl5>=5.32.r0<5.33 - not found
===> Installing existing package /packages/All/perl5-5.32.0_1.txz
[121amd64-default-job-07] Installing perl5-5.32.0_1...
[121amd64-default-job-07] Extracting perl5-5.32.0_1: .......... done
===> openmpi3-3.1.6 depends on package: perl5>=5.32.r0<5.33 - found
===> Returning to build of openmpi3-3.1.6
===========================================================================
=======================<phase: lib-depends >============================
===> openmpi3-3.1.6 depends on shared library: libhwloc.so - not found
===> Installing existing package /packages/All/hwloc-1.11.13.txz
[121amd64-default-job-07] Installing hwloc-1.11.13...
[121amd64-default-job-07] `-- Installing libpciaccess-0.16...
[121amd64-default-job-07] | `-- Installing pciids-20201127...
[121amd64-default-job-07] | `-- Extracting pciids-20201127: ..... done
[121amd64-default-job-07] `-- Extracting libpciaccess-0.16: ......... done
[121amd64-default-job-07] `-- Installing libxml2-2.9.10_2...
[121amd64-default-job-07] `-- Extracting libxml2-2.9.10_2: .......... done
[121amd64-default-job-07] Extracting hwloc-1.11.13: .......... done
===> openmpi3-3.1.6 depends on shared library: libhwloc.so - found (/usr/local/lib/libhwloc.so)
===> Returning to build of openmpi3-3.1.6
===> openmpi3-3.1.6 depends on shared library: libltdl.so - not found
===> Installing existing package /packages/All/libltdl-2.4.6.txz
[121amd64-default-job-07] Installing libltdl-2.4.6...
[121amd64-default-job-07] Extracting libltdl-2.4.6: .......... done
===> openmpi3-3.1.6 depends on shared library: libltdl.so - found (/usr/local/lib/libltdl.so)
===> Returning to build of openmpi3-3.1.6
===> openmpi3-3.1.6 depends on shared library: libevent.so - not found
===> Installing existing package /packages/All/libevent-2.1.12.txz
[121amd64-default-job-07] Installing libevent-2.1.12...
[121amd64-default-job-07] Extracting libevent-2.1.12: .......... done
===> openmpi3-3.1.6 depends on shared library: libevent.so - found (/usr/local/lib/libevent.so)
===> Returning to build of openmpi3-3.1.6
===> openmpi3-3.1.6 depends on shared library: libmunge.so - not found
===> Installing existing package /packages/All/munge-0.5.14_1.txz
[121amd64-default-job-07] Installing munge-0.5.14_1...
[121amd64-default-job-07] Extracting munge-0.5.14_1: ......... done
===> openmpi3-3.1.6 depends on shared library: libmunge.so - found (/usr/local/lib/libmunge.so)
===> Returning to build of openmpi3-3.1.6
===> openmpi3-3.1.6 depends on shared library: libslurm.so - not found
===> Installing existing package /packages/All/slurm-wlm-20.02.1_5.txz
[121amd64-default-job-07] Installing slurm-wlm-20.02.1_5...
[121amd64-default-job-07] `-- Installing hdf-szip-2.1.1...
[121amd64-default-job-07] `-- Extracting hdf-szip-2.1.1: .......... done
[121amd64-default-job-07] `-- Installing hdf5-1.10.6,1...
[121amd64-default-job-07] `-- Extracting hdf5-1.10.6,1: .......... done
[121amd64-default-job-07] `-- Installing hwloc2-2.3.0...
pkg-static: hwloc2-2.3.0 conflicts with hwloc-1.11.13 (installs files into the same place). Problematic file: /usr/local/bin/hwloc-annotate
Failed to install the following 1 package(s): /packages/All/slurm-wlm-20.02.1_5.txz
*** Error code 1
Stop.
make: stopped in /usr/ports/net/openmpi3
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