[package - head-amd64-default][science/mdynamix] Failed for mdynamix-5.2.8_4 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Sat Oct 17 05:35:32 UTC 2020
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri at FreeBSD.org
Last committer: gerald at FreeBSD.org
Ident: $FreeBSD: head/science/mdynamix/Makefile 507372 2019-07-26 20:46:53Z gerald $
Log URL: http://beefy18.nyi.freebsd.org/data/head-amd64-default/p552369_s366713/logs/mdynamix-5.2.8_4.log
Build URL: http://beefy18.nyi.freebsd.org/build.html?mastername=head-amd64-default&build=p552369_s366713
Log:
=>> Building science/mdynamix
build started at Sat Oct 17 05:35:10 UTC 2020
port directory: /usr/ports/science/mdynamix
package name: mdynamix-5.2.8_4
building for: FreeBSD head-amd64-default-job-05 13.0-CURRENT FreeBSD 13.0-CURRENT 1300120 amd64
maintained by: yuri at FreeBSD.org
Makefile ident: $FreeBSD: head/science/mdynamix/Makefile 507372 2019-07-26 20:46:53Z gerald $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300100
Jail OSVERSION: 1300120
Job Id: 05
!!! Jail is newer than host. (Jail: 1300120, Host: 1300100) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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--MAINTAINER--
yuri at FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/science/mdynamix/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/mdynamix/work HOME=/wrkdirs/usr/ports/science/mdynamix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/mdynamix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran9" FC="gfortran9" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc9" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/mdynamix/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/mdynamix/work HOME=/wrkdirs/usr/ports/science/mdynamix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/mdynamix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPP
FLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
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--PLIST_SUB--
OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/mdynamix" EXAMPLESDIR="share/examples/mdynamix" DATADIR="share/mdynamix" WWWDIR="www/mdynamix" ETCDIR="etc/mdynamix"
--End PLIST_SUB--
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--End resource limits--
=======================<phase: check-sanity >============================
===> License GPLv2+ accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> mdynamix-5.2.8_4 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.15.10.txz
[head-amd64-default-job-05] Installing pkg-1.15.10...
[head-amd64-default-job-05] Extracting pkg-1.15.10: .......... done
===> mdynamix-5.2.8_4 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of mdynamix-5.2.8_4
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2+ accepted by the user
===> Fetching all distfiles required by mdynamix-5.2.8_4 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv2+ accepted by the user
===> Fetching all distfiles required by mdynamix-5.2.8_4 for building
=> SHA256 Checksum OK for md528.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2+ accepted by the user
===> Fetching all distfiles required by mdynamix-5.2.8_4 for building
===> Extracting for mdynamix-5.2.8_4
=> SHA256 Checksum OK for md528.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for mdynamix-5.2.8_4
===========================================================================
=======================<phase: build-depends >============================
===> mdynamix-5.2.8_4 depends on executable: gfortran9 - not found
===> Installing existing package /packages/All/gcc9-9.3.0_1.txz
[head-amd64-default-job-05] Installing gcc9-9.3.0_1...
[head-amd64-default-job-05] `-- Installing binutils-2.33.1_3,1...
[head-amd64-default-job-05] | `-- Installing gettext-runtime-0.21...
[head-amd64-default-job-05] | | `-- Installing indexinfo-0.3.1...
[head-amd64-default-job-05] | | `-- Extracting indexinfo-0.3.1: .... done
[head-amd64-default-job-05] | `-- Extracting gettext-runtime-0.21: .......... done
[head-amd64-default-job-05] `-- Extracting binutils-2.33.1_3,1: .......... done
[head-amd64-default-job-05] `-- Installing gmp-6.2.0...
[head-amd64-default-job-05] `-- Extracting gmp-6.2.0: .......... done
<snip>
mpif.h:561:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:553:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:558:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:561:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
gfortran -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o scalar.o scalar.f
gfortran -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o service.o service.f
mpif77 -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o pimd.o pimd.f
mpif.h:552:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:553:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:558:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:561:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:553:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:558:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:561:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:553:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:558:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:561:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:553:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:558:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:561:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:553:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:558:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:561:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:552:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:553:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:558:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
mpif.h:561:11:
Warning: Legacy Extension: SAVE statement at (1) follows blanket SAVE statement
gfortran -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o setup.o setup.f
setup.f:965:72:
965 | DO 100 J = 1,NRY
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
setup.f:966:72:
966 | DO 100 K = 1,NRZ
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
mpif77 -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o setup.o setup.f
setup.f:965:72:
965 | DO 100 J = 1,NRY
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
setup.f:966:72:
966 | DO 100 K = 1,NRZ
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
gfortran -O -Wl,-rpath=/usr/local/lib/gcc9 -ffast-math -c -o util.o util.f
util.f:168:72:
168 | DO 20 J=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 20 at (1)
util.f:169:72:
169 | 20 A(I,J)=A(I,J)/SCL
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at (1)
util.f:171:72:
171 | DO 30 J=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 30 at (1)
util.f:177:72:
177 | DO 100 J=1,IU1
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 100 at (1)
util.f:178:72:
178 | 100 TES=TES+2.D0*A(I,J)*A(I,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 100 at (1)
util.f:185:72:
185 | DO 165 J=1,IUU1
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 165 at (1)
util.f:202:72:
202 | IF(K-I)140,135,135
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:207:72:
207 | 140 IF(K-J)145,150,150
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:223:72:
223 | IF(M-1)175,170,170
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:226:72:
226 | 175 IF(TES-RHO)180,180,105
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:228:72:
228 | DO 190 J=1,N
| 1
Warning: Fortran 2018 deleted feature: Shared DO termination label 190 at (1)
util.f:229:72:
229 | 190 A(I,J)=SCL*A(I,J)
| 1
Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 190 at (1)
util.f:478:72:
478 | IF(NDIM-6)5,5,2
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
util.f:484:72:
484 | IF(I-NDIM)3,6,6
| 1
Warning: Fortran 2018 deleted feature: Arithmetic IF statement at (1)
gfortran -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -o md aver.o cpu_intel.o input.o forces.o main.o mdee.o mdstep.o restart.o scalar.o service.o setup.o util.o
/usr/local/bin/ld: setup.o: file not recognized: file truncated
collect2: error: ld returned 1 exit status
make[2]: *** [Makefile.gfortran:10: default] Error 1
make[2]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528'
gmake[1]: *** [Makefile:2: default] Error 2
gmake[1]: *** Waiting for unfinished jobs....
mpif77 -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 -B/usr/local/bin -fstack-protector-strong -o mdp aver.o cpu_mpi.o input.o forces.o main.o mdee.o mdstep.o restart.o mpi.o pimd.o service.o setup.o util.o
make[2]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528'
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/mdynamix/work/md528'
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/science/mdynamix
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