[exp - 121amd64-default-build-as-user][science/libgeodecomp] Failed for libgeodecomp-0.4.0_19 in configure
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Fri Jun 19 07:16:24 UTC 2020
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: kurt at kmk-computers.de
Last committer: jbeich at FreeBSD.org
Ident: $FreeBSD: head/science/libgeodecomp/Makefile 519824 2019-12-11 17:53:48Z jbeich $
Log URL: http://package19.nyi.freebsd.org/data/121amd64-default-build-as-user/539393/logs/libgeodecomp-0.4.0_19.log
Build URL: http://package19.nyi.freebsd.org/build.html?mastername=121amd64-default-build-as-user&build=539393
Log:
=>> Building science/libgeodecomp
build started at Fri Jun 19 07:15:55 UTC 2020
port directory: /usr/ports/science/libgeodecomp
package name: libgeodecomp-0.4.0_19
building for: FreeBSD 121amd64-default-build-as-user-job-11 12.1-RELEASE-p6 FreeBSD 12.1-RELEASE-p6 amd64
maintained by: kurt at kmk-computers.de
Makefile ident: $FreeBSD: head/science/libgeodecomp/Makefile 519824 2019-12-11 17:53:48Z jbeich $
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---Begin OPTIONS List---
===> The following configuration options are available for libgeodecomp-0.4.0_19:
MPI=on: MPI (Message Passing Interface) support
SCOTCH=on: Enable graph partitioning based on Scotch/Scotch-PT
SILO=on: Enable Silo dependend output
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
kurt at kmk-computers.de
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/libgeodecomp/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/libgeodecomp/work HOME=/wrkdirs/usr/ports/science/libgeodecomp/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/libgeodecomp/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/libgeodecomp/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/libgeodecomp/work HOME=/wrkdirs/usr/ports/science/libgeodecomp/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/libgeodecomp/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" DESTDIR=/wrkdirs/usr/ports/science/libgeodecomp/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="gcc9" CFLAGS="-O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -fno-strict-aliasing " CPP="cpp9" CPPFLAGS=
"" LDFLAGS=" -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -L/usr/local/lib/gcc9 " LIBS="" CXX="g++9" CXXFLAGS="-O2 -pipe -fstack-protector-strong -Wl,-rpath=/usr/local/lib/gcc9 -Wl,-rpath=/usr/local/lib/gcc9 " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
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PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/libgeodecomp DOCSDIR=/usr/local/share/doc/libgeodecomp EXAMPLESDIR=/usr/local/share/examples/libgeodecomp WWWDIR=/usr/local/www/libgeodecomp ETCDIR=/usr/local/etc/libgeodecomp
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=======================<phase: check-sanity >============================
===> License BSL accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> libgeodecomp-0.4.0_19 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.14.4.txz
[121amd64-default-build-as-user-job-11] Installing pkg-1.14.4...
[121amd64-default-build-as-user-job-11] Extracting pkg-1.14.4: .......... done
===> libgeodecomp-0.4.0_19 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of libgeodecomp-0.4.0_19
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License BSL accepted by the user
===> Fetching all distfiles required by libgeodecomp-0.4.0_19 for building
===========================================================================
=======================<phase: checksum >============================
===> License BSL accepted by the user
===> Fetching all distfiles required by libgeodecomp-0.4.0_19 for building
=> SHA256 Checksum OK for libgeodecomp-0.4.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License BSL accepted by the user
===> Fetching all distfiles required by libgeodecomp-0.4.0_19 for building
===> Extracting for libgeodecomp-0.4.0_19
=> SHA256 Checksum OK for libgeodecomp-0.4.0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for libgeodecomp-0.4.0_19
===> Applying FreeBSD patches for libgeodecomp-0.4.0_19 from /usr/ports/science/libgeodecomp/files
===========================================================================
=======================<phase: build-depends >============================
===> libgeodecomp-0.4.0_19 depends on file: /usr/local/lib/libscotch.a - not found
===> Installing existing package /packages/All/scotch-6.0.4.a7_1.txz
[121amd64-default-build-as-user-job-11] Installing scotch-6.0.4.a7_1...
[121amd64-default-build-as-user-job-11] `-- Installing mpich-3.2.1_6...
[121amd64-default-build-as-user-job-11] | `-- Installing gcc9-9.3.0_1...
[121amd64-default-build-as-user-job-11] | | `-- Installing binutils-2.33.1_2,1...
[121amd64-default-build-as-user-job-11] | | `-- Installing gettext-runtime-0.20.2...
[121amd64-default-build-as-user-job-11] | | | `-- Installing indexinfo-0.3.1...
[121amd64-default-build-as-user-job-11] | | | `-- Extracting indexinfo-0.3.1: .... done
[121amd64-default-build-as-user-job-11] | | `-- Extracting gettext-runtime-0.20.2: .......... done
[121amd64-default-build-as-user-job-11] | | `-- Extracting binutils-2.33.1_2,1: .......... done
[121amd64-default-build-as-user-job-11] | | `-- Installing gmp-6.2.0...
[121amd64-default-build-as-user-job-11] | | `-- Extracting gmp-6.2.0: .......... done
[121amd64-default-build-as-user-job-11] | | `-- Installing mpc-1.1.0_2...
[121amd64-default-build-as-user-job-11] | | `-- Installing mpfr-4.0.2...
[121amd64-default-build-as-user-job-11] | | `-- Extracting mpfr-4.0.2: .......... done
[121amd64-default-build-as-user-job-11] | | `-- Extracting mpc-1.1.0_2: ......... done
[121amd64-default-build-as-user-job-11] | `-- Extracting gcc9-9.3.0_1: .......... done
<snip>
=======================<phase: configure >============================
===> Configuring for libgeodecomp-0.4.0_19
===> Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/libgeodecomp/work/.build
-- The C compiler identification is GNU 9.3.0
-- The CXX compiler identification is GNU 9.3.0
-- Check for working C compiler: /usr/local/bin/gcc9
-- Check for working C compiler: /usr/local/bin/gcc9 - works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/local/bin/g++9
-- Check for working CXX compiler: /usr/local/bin/g++9 - works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Warning at src/CMakeLists.txt:3 (find_package):
By not providing "FindHPX.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "HPX", but
CMake did not find one.
Could not find a package configuration file provided by "HPX" with any of
the following names:
HPXConfig.cmake
hpx-config.cmake
Add the installation prefix of "HPX" to CMAKE_PREFIX_PATH or set "HPX_DIR"
to a directory containing one of the above files. If "HPX" provides a
separate development package or SDK, be sure it has been installed.
-- Found Boost: /usr/local/include (found version "1.72.0") found components: date_time filesystem system
-- Found Boost: /usr/local/include (found version "1.72.0") found components: serialization
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Found Threads: TRUE
-- Found Boost: /usr/local/include (found version "1.72.0") found components: thread chrono date_time atomic
CMake Warning at /usr/local/share/cmake/Modules/FindBoost.cmake:2012 (message):
No header defined for move; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
src/CMakeLists.txt:28 (find_package)
-- Could NOT find Boost (missing: move) (found version "1.72.0")
-- Could NOT find Boost (missing: mpi) (found version "1.72.0")
CUDA_TOOLKIT_ROOT_DIR not found or specified
-- Could NOT find CUDA (missing: CUDA_TOOLKIT_ROOT_DIR CUDA_NVCC_EXECUTABLE CUDA_INCLUDE_DIRS CUDA_CUDART_LIBRARY)
-- Could NOT find OpenCL (missing: OPENCL_LIBRARIES OPENCL_INCLUDE_DIRS)
-- Found MPI_C: /usr/local/lib/libmpi.so (found version "3.1")
-- Found MPI_CXX: /usr/local/lib/libmpicxx.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- WARNING: OpenCV was not found. Please specify OpenCV directory using OpenCV_DIR env. variable
-- Found OpenMP_C: -fopenmp (found version "4.5")
-- Found OpenMP_CXX: -fopenmp (found version "4.5")
-- Found OpenMP: TRUE (found version "4.5")
-- Could NOT find PythonLibs (missing: PYTHON_LIBRARIES PYTHON_INCLUDE_DIRS) (Required is at least version "2")
-- Could NOT find Ruby (missing: RUBY_EXECUTABLE RUBY_INCLUDE_DIR RUBY_LIBRARY)
-- Checking for package 'SCOTCH-PT'
-- Performing test SCOTCH_TEST_RUNS
-- Performing test SCOTCH_TEST_RUNS - Failed
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.11")
-- Performing test SCOTCH_ZLIB_TEST_RUNS
-- Performing test SCOTCH_ZLIB_TEST_RUNS - Failed
-- SCOTCH could not be found. Be sure to set SCOTCH_DIR. (missing: SCOTCH_TEST_RUNS)
-- Found Silo: /usr/local/lib/libsiloh5.so
-- Found unsuitable Qt version "" from NOTFOUND
-- Could NOT find VisIt (missing: VisIt_INCLUDE_DIRS VisIt_LIBRARIES)
-- Performing Test SUPPORTS_MARCH_NATIVE
-- Performing Test SUPPORTS_MARCH_NATIVE - Success
-- The following options have been configured:
* ADDITIONAL_COMPILE_FLAGS=" -Wall -Wno-sign-promo -Wnon-virtual-dtor -march=native",
default=" -Wall -Wno-sign-promo -Wnon-virtual-dtor -march=native"
Add these flags when compiling.
* CMAKE_BUILD_TYPE="Release",
default="Release"
Sets the compile/link options, e.g. Debug, Release... Refer to the cmake documentation for more details.
* CAKE_CXX_COMPILER="/usr/local/bin/g++9",
default="/usr/local/bin/g++9"
Select the C++ compiler
* CMAKE_INSTALL_PREFIX="/usr/local",
default="/usr/local"
Path for installation
* DEBUG_LEVEL=" 0",
default=" 0"
Configure the amount/verbosity of debug output
* LIB_LINKAGE_TYPE="SHARED",
default="SHARED"
Controls which type of library to build. Suggested: SHARED on Linux (creates a shared object "libgeodecomp.so"), STATIC should work for builds on Cray and Windows.
* LIB_DIR="lib",
default="lib"
Library subdirectory (e.g. lib, lib32, lib64), useful for multilib builds
* LIMIT_TESTS="false",
default="false"
Limit the directories of tests to run. Only tests matching the specified pattern will be run.
* UNITEXEC="",
default=""
May be used to specify a wrapper which then calls a unit test executable. Handy if for instance the unit tests shall be run on a remote machine.
* WITH_BOOST_ASIO="true",
default="true"
Some Boost distributions ship too old versions of ASIO which are not compatible with LibGeoDecomp. Use this flag to switch ASIO-related code off.
* WITH_BOOST_MOVE="0",
default="0"
Enable/disable Boost.Move for move semantics (e.g. to avoid copies of vectors).
* WITH_BOOST_MPI="0",
default="0"
Enable/disable Boost.MPI related code.
* WITH_BOOST_SERIALIZATION="0",
default="0"
Explicitly disable Boost.Serialization, which isn't available on some machines (e.g. woody.rrze.uni-erlangen.de). Don't do this if you need the HPX backend.
* WITH_CUDA="FALSE",
default="FALSE"
Enable modules which harness Nvidia CUDA GPUs
* WITH_FORTRAN="false",
default="false"
Build Fortran examples/utilities, too
* WITH_HPX="FALSE",
default="0"
Build those modules which require HPX
* WITH_INTRINSICS="false",
default="false"
Switch on/off the code parts which require SSE or AVX intrinsics
* WITH_LAX_VISIT_TESTS="false",
default="false"
Remove some of the stricter assertions from VisIt related unit tests -- VisIt sometimes produces erroneous results when running on a remote machine (e.g. for autobuilds)
* WITH_LIBPTHREAD="true",
default="true"
Use this option to avoid linking against libpthread but instead adding -pthread to the compiler options (the former is required for CUDA when using nvcc, the latter for Android with gcc).
* WITH_MPI="true",
default="TRUE"
If set, all MPI related components will be built. This option is required for the MPI unit tests.
* WITH_OPENCL="FALSE",
default="false"
Enable modules for delegating to OpenCL devices
* WITH_OPENCV="FALSE",
default="false"
Build those modules which require OpenCV
* WITH_QT="FALSE",
default="FALSE"
Build example codes which rely on QT4 for the GUI
* WITH_SCOTCH="true",
default="FALSE"
Enables LibGeoDecomp to use Scotch and PT-Scotch for domain decomposition.
* WITH_SILO="true",
default="TRUE"
Silo is a flexible output library developed by LLNL.
* WITH_THREADS="true",
default="true"
Lets you control whether we'll use threads (e.g. boost::thread)
* WITH_TYPEMAPS="FALSE",
default="FALSE"
Controls whether the build system should regenerate typemaps.{h,cpp}. Requires Ruby and some Unix tools.
* WITH_VISIT="FALSE",
default="FALSE"
Activate code parts which use VisitWriter and SerialVisitWriter
Files "/wrkdirs/usr/ports/science/libgeodecomp/work/.build/libgeodecomp/config.h" to "/wrkdirs/usr/ports/science/libgeodecomp/work/.build/libgeodecomp/config.h.new" are different.
updating /wrkdirs/usr/ports/science/libgeodecomp/work/libgeodecomp-0.4.0/src//auto.cmake
CMake Error at src/CMakeLists.txt:328 (message):
WITH_SCOTCH selected but no installation of Scotch could be found.
-- Configuring incomplete, errors occurred!
See also "/wrkdirs/usr/ports/science/libgeodecomp/work/.build/CMakeFiles/CMakeOutput.log".
*** Error code 1
Stop.
make: stopped in /usr/ports/science/libgeodecomp
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