[package - head-arm64-default][science/InsightToolkit] Failed for InsightToolkit-5.0.1_4 in build/timeout
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Wed May 13 23:48:54 UTC 2020
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: woodsb02 at FreeBSD.org
Last committer: stephen at FreeBSD.org
Ident: $FreeBSD: head/science/InsightToolkit/Makefile 526864 2020-02-22 23:28:41Z stephen $
Log URL: http://thunderx1.nyi.freebsd.org/data/head-arm64-default/p533581_s360543/logs/InsightToolkit-5.0.1_4.log
Build URL: http://thunderx1.nyi.freebsd.org/build.html?mastername=head-arm64-default&build=p533581_s360543
Log:
=>> Building science/InsightToolkit
build started at Tue May 12 07:42:45 UTC 2020
port directory: /usr/ports/science/InsightToolkit
package name: InsightToolkit-5.0.1_4
building for: FreeBSD head-arm64-default-job-21 13.0-CURRENT FreeBSD 13.0-CURRENT 1300093 arm64
maintained by: woodsb02 at FreeBSD.org
Makefile ident: $FreeBSD: head/science/InsightToolkit/Makefile 526864 2020-02-22 23:28:41Z stephen $
Poudriere version: 3.2.8-5-gc81843e5
Host OSVERSION: 1300089
Jail OSVERSION: 1300093
Job Id: 21
!!! Jail is newer than host. (Jail: 1300093, Host: 1300089) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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---Begin OPTIONS List---
===> The following configuration options are available for InsightToolkit-5.0.1_4:
EXAMPLES=on: Build examples (very time consuming)
TESTING=off: Build testing programs (very time consuming)
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
woodsb02 at FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/science/InsightToolkit/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/InsightToolkit/work HOME=/wrkdirs/usr/ports/science/InsightToolkit/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/InsightToolkit/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
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--Resource limits--
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--End resource limits--
=======================<phase: check-sanity >============================
===> License APACHE20 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> InsightToolkit-5.0.1_4 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.14.4.txz
[head-arm64-default-job-21] Installing pkg-1.14.4...
[head-arm64-default-job-21] Extracting pkg-1.14.4: .......... done
===> InsightToolkit-5.0.1_4 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of InsightToolkit-5.0.1_4
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by InsightToolkit-5.0.1_4 for building
===========================================================================
=======================<phase: checksum >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by InsightToolkit-5.0.1_4 for building
=> SHA256 Checksum OK for InsightData-5.0.1.tar.gz.
=> SHA256 Checksum OK for InsightSoftwareConsortium-ITK-v5.0.1_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by InsightToolkit-5.0.1_4 for building
===> Extracting for InsightToolkit-5.0.1_4
=> SHA256 Checksum OK for InsightData-5.0.1.tar.gz.
=> SHA256 Checksum OK for InsightSoftwareConsortium-ITK-v5.0.1_GH0.tar.gz.
/bin/mv /wrkdirs/usr/ports/science/InsightToolkit/work/InsightToolkit-5.0.1/.ExternalData/* /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/.ExternalData/
/bin/rm -f -r /wrkdirs/usr/ports/science/InsightToolkit/work/InsightToolkit-5.0.1
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for InsightToolkit-5.0.1_4
===> Applying FreeBSD patches for InsightToolkit-5.0.1_4
===> Cleanly applied FreeBSD patch(es) patch-CMake_ITKModuleTest.cmake patch-Modules_ThirdParty_MINC_src_libminc_CMakeLists.txt
===========================================================================
=======================<phase: build-depends >============================
===> InsightToolkit-5.0.1_4 depends on package: googletest>=0 - not found
<snip>
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5472/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/ImageRegistration5.dir/ImageRegistration5.cxx.o -o bin/ImageRegistration5 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm lib/libITKIOBr
uker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPEG-5.0.so.1 lib
/libITKQuadEdgeMesh-5.0.so.1 lib/libITKIOMe!
ta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 lib/libITKSpatial
Objects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5473/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
ITK-5.0.1/Modules/ThirdParty/libLBFGS/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Watersheds/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Bridge/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/SpatialFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/RegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/QuadEdgeMeshFiltering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LabelVoting/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/KLMRegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageNoise/include -I/wrkdirs/usr/ports/science/InsightT
oolkit/work/ITK-5.0.1/Modules/Filtering/Imag!
eFusion/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFrequency/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMatlab/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformInsightLegacy/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformHDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformFactory/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Stimulate/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/XML/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK
-5.0.1/Modules/IO/RAW/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MRC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/volume_io/Include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libsrc2 -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libcommon -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC -IModules/ThirdParty/MINC -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/LSM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG2000/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/OpenJPEG/src/openjpeg -IModule
s/ThirdParty/OpenJPEG/src/openjpeg -I/wrkdir!
s/usr/por!
ts/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/HDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Siemens/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GE/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/IPL/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/CSV/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Bruker/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BioRad/include -IModules/ThirdParty/HDF5/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUThresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUPDEDeformable/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/PDEDeformable/inc
lude -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUAnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUFiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Eigen/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DisplacementField/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DiffusionTensorImage/include -I/wrkdirs/usr
/ports/science/InsightToolkit/work/ITK-5.0.1!
/Modules/!
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Toolkit/work/ITK-5.0.1/Modules/Filtering/AntiAlias/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSets/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SignedDistanceFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFeature/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageSources/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGradient/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Smoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompare/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FastMarching/include -I/wrkdirs/usr/ports/science/InsightToolkit/work
/ITK-5.0.1/Modules/Filtering/DistanceMap/inc!
lude -I/w!
rkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/NarrowBand/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BinaryMathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/MathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/ConnectedComponents/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Thresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/LabelMap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageLabel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageIntensity/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Path/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageStatistics/inclu
de -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompose/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/TestKernel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TIFF/include -IModules/ThirdParty/TIFF/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/PNG/include -IModules/ThirdParty/PNG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NRRD/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NrrdIO/src/NrrdIO -IModules/ThirdParty/NrrdIO/src/NrrdIO -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NIFTI/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Meta/include -I/wrkdirs/usr/port
s/science/InsightToolkit/work/ITK-5.0.1/Modu!
les/Third!
Party/MetaIO/src/MetaIO/src -IModules/ThirdParty/MetaIO/src/MetaIO/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshVTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOFF/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOBJ/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshGifti/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/GIFTI/src/gifticlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/znzlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/niftilib -IModules/ThirdParty/Expat/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshFreeSurfer/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshBYU/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/I
O/MeshBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Voronoi/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/QuadEdgeMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG/include -IModules/ThirdParty/JPEG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GIPL/include -IModules/ThirdParty/ZLIB/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GDCM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BMP/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include -IModules/IO/ImageBase -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/AnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGrid/include -
I/wrkdirs/usr/ports/science/InsightToolkit/w!
ork/ITK-5!
.0.1/Modules/Core/ImageFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Statistics/include -IModules/ThirdParty/Netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/ImageAdaptors/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/CurvatureFlow/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/FiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include -IModules/Core/Common -IModules/ThirdParty/VNL/src/vxl/core -IModules/ThirdParty/VNL/src/vxl/vcl -IModules/ThirdParty/VNL/src/vxl/v3p/netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core -I/wrkdirs/usr/ports/science/I
nsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/vcl -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -IModules/ThirdParty/KWSys/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/KWIML/src -IModules/ThirdParty/KWIML/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/Eigen3/src -IModules/ThirdParty/Eigen3/src -IModules/ThirdParty/DoubleConversion/src/double-conversion -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DoubleConversion/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl -IModules/ThirdParty/NIFTI/src/nifti/znzlib -IModules/ThirdParty/NIFTI/src/nifti/niftilib -isystem /usr/local/include -isystem /usr/local/include/gdcm-3.0 -isystem /usr/local/include/eigen3 -O2 -pipe
-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/DeformableRegistration6.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/DeformableRegistration6.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/DeformableRegistration6.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/DeformableRegistration6.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/DeformableRegistration6.cxx:58:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkCompositeTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkMultiTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkTransform.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5474/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration6.dir/DeformableRegistration6.cxx.o -o bin/DeformableRegistration6 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm
lib/libITKIOBruker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPE
G-5.0.so.1 lib/libITKQuadEdgeMesh-5.0.so.1 !
lib/libITKIOMeta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 li
b/libITKSpatialObjects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5475/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
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-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/ImageRegistration18.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/ImageRegistration18.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/ImageRegistration18.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration18.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration18.cxx:34:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkImage.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkNeighborhoodAccessorFunctor.h:22:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkImageBase.h:34:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5476/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/ImageRegistration18.dir/ImageRegistration18.cxx.o -o bin/ImageRegistration18 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm lib/libITKI
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lib/libITKQuadEdgeMesh-5.0.so.1 lib/libITKI!
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les/Third!
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I/wrkdirs/usr/ports/science/InsightToolkit/w!
ork/ITK-5!
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-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/DeformableRegistration15.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/DeformableRegistration15.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/DeformableRegistration15.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/DeformableRegistration15.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/DeformableRegistration15.cxx:33:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkImage.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkNeighborhoodAccessorFunctor.h:22:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkImageBase.h:34:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5478/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration15.dir/DeformableRegistration15.cxx.o -o bin/DeformableRegistration15 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -
lm lib/libITKIOBruker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIO
JPEG-5.0.so.1 lib/libITKQuadEdgeMesh-5.0.so!
.1 lib/libITKIOMeta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1
lib/libITKSpatialObjects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5479/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
ITK-5.0.1/Modules/ThirdParty/libLBFGS/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Watersheds/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Bridge/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/SpatialFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/RegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/QuadEdgeMeshFiltering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LabelVoting/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/KLMRegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageNoise/include -I/wrkdirs/usr/ports/science/InsightT
oolkit/work/ITK-5.0.1/Modules/Filtering/Imag!
eFusion/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFrequency/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMatlab/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformInsightLegacy/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformHDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformFactory/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Stimulate/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/XML/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK
-5.0.1/Modules/IO/RAW/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MRC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/volume_io/Include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libsrc2 -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libcommon -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC -IModules/ThirdParty/MINC -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/LSM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG2000/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/OpenJPEG/src/openjpeg -IModule
s/ThirdParty/OpenJPEG/src/openjpeg -I/wrkdir!
s/usr/por!
ts/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/HDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Siemens/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GE/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/IPL/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/CSV/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Bruker/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BioRad/include -IModules/ThirdParty/HDF5/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUThresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUPDEDeformable/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/PDEDeformable/inc
lude -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUAnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUFiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Eigen/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DisplacementField/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DiffusionTensorImage/include -I/wrkdirs/usr
/ports/science/InsightToolkit/work/ITK-5.0.1!
/Modules/!
Filtering/Denoising/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/DeformableMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Deconvolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DICOMParser/src/DICOMParser -IModules/ThirdParty/DICOMParser/src/DICOMParser -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Convolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FFT/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Colormap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Classifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BiasCorrection/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Polynomials/include -I/wrkdirs/usr/ports/science/Insight
Toolkit/work/ITK-5.0.1/Modules/Filtering/AntiAlias/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSets/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SignedDistanceFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFeature/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageSources/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGradient/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Smoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompare/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FastMarching/include -I/wrkdirs/usr/ports/science/InsightToolkit/work
/ITK-5.0.1/Modules/Filtering/DistanceMap/inc!
lude -I/w!
rkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/NarrowBand/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BinaryMathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/MathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/ConnectedComponents/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Thresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/LabelMap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageLabel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageIntensity/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Path/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageStatistics/inclu
de -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompose/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/TestKernel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TIFF/include -IModules/ThirdParty/TIFF/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/PNG/include -IModules/ThirdParty/PNG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NRRD/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NrrdIO/src/NrrdIO -IModules/ThirdParty/NrrdIO/src/NrrdIO -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NIFTI/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Meta/include -I/wrkdirs/usr/port
s/science/InsightToolkit/work/ITK-5.0.1/Modu!
les/Third!
Party/MetaIO/src/MetaIO/src -IModules/ThirdParty/MetaIO/src/MetaIO/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshVTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOFF/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOBJ/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshGifti/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/GIFTI/src/gifticlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/znzlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/niftilib -IModules/ThirdParty/Expat/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshFreeSurfer/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshBYU/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/I
O/MeshBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Voronoi/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/QuadEdgeMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG/include -IModules/ThirdParty/JPEG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GIPL/include -IModules/ThirdParty/ZLIB/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GDCM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BMP/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include -IModules/IO/ImageBase -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/AnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGrid/include -
I/wrkdirs/usr/ports/science/InsightToolkit/w!
ork/ITK-5!
.0.1/Modules/Core/ImageFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Statistics/include -IModules/ThirdParty/Netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/ImageAdaptors/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/CurvatureFlow/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/FiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include -IModules/Core/Common -IModules/ThirdParty/VNL/src/vxl/core -IModules/ThirdParty/VNL/src/vxl/vcl -IModules/ThirdParty/VNL/src/vxl/v3p/netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core -I/wrkdirs/usr/ports/science/I
nsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/vcl -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -IModules/ThirdParty/KWSys/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/KWIML/src -IModules/ThirdParty/KWIML/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/Eigen3/src -IModules/ThirdParty/Eigen3/src -IModules/ThirdParty/DoubleConversion/src/double-conversion -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DoubleConversion/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl -IModules/ThirdParty/NIFTI/src/nifti/znzlib -IModules/ThirdParty/NIFTI/src/nifti/niftilib -isystem /usr/local/include -isystem /usr/local/include/gdcm-3.0 -isystem /usr/local/include/eigen3 -O2 -pipe
-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/DeformableRegistration2.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/DeformableRegistration2.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/DeformableRegistration2.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/DeformableRegistration2.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/DeformableRegistration2.cxx:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include/itkImageFileReader.h:24:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include/itkImageIOBase.h:30:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5480/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration2.dir/DeformableRegistration2.cxx.o -o bin/DeformableRegistration2 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm
lib/libITKIOBruker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPE
G-5.0.so.1 lib/libITKQuadEdgeMesh-5.0.so.1 !
lib/libITKIOMeta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 li
b/libITKSpatialObjects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5481/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
ITK-5.0.1/Modules/ThirdParty/libLBFGS/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Watersheds/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Bridge/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/SpatialFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/RegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/QuadEdgeMeshFiltering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LabelVoting/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/KLMRegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageNoise/include -I/wrkdirs/usr/ports/science/InsightT
oolkit/work/ITK-5.0.1/Modules/Filtering/Imag!
eFusion/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFrequency/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMatlab/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformInsightLegacy/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformHDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformFactory/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Stimulate/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/XML/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK
-5.0.1/Modules/IO/RAW/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MRC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/volume_io/Include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libsrc2 -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libcommon -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC -IModules/ThirdParty/MINC -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/LSM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG2000/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/OpenJPEG/src/openjpeg -IModule
s/ThirdParty/OpenJPEG/src/openjpeg -I/wrkdir!
s/usr/por!
ts/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/HDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Siemens/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GE/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/IPL/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/CSV/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Bruker/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BioRad/include -IModules/ThirdParty/HDF5/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUThresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUPDEDeformable/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/PDEDeformable/inc
lude -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUAnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUFiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Eigen/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DisplacementField/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DiffusionTensorImage/include -I/wrkdirs/usr
/ports/science/InsightToolkit/work/ITK-5.0.1!
/Modules/!
Filtering/Denoising/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/DeformableMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Deconvolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DICOMParser/src/DICOMParser -IModules/ThirdParty/DICOMParser/src/DICOMParser -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Convolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FFT/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Colormap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Classifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BiasCorrection/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Polynomials/include -I/wrkdirs/usr/ports/science/Insight
Toolkit/work/ITK-5.0.1/Modules/Filtering/AntiAlias/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSets/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SignedDistanceFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFeature/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageSources/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGradient/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Smoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompare/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FastMarching/include -I/wrkdirs/usr/ports/science/InsightToolkit/work
/ITK-5.0.1/Modules/Filtering/DistanceMap/inc!
lude -I/w!
rkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/NarrowBand/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BinaryMathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/MathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/ConnectedComponents/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Thresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/LabelMap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageLabel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageIntensity/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Path/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageStatistics/inclu
de -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompose/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/TestKernel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TIFF/include -IModules/ThirdParty/TIFF/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/PNG/include -IModules/ThirdParty/PNG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NRRD/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NrrdIO/src/NrrdIO -IModules/ThirdParty/NrrdIO/src/NrrdIO -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NIFTI/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Meta/include -I/wrkdirs/usr/port
s/science/InsightToolkit/work/ITK-5.0.1/Modu!
les/Third!
Party/MetaIO/src/MetaIO/src -IModules/ThirdParty/MetaIO/src/MetaIO/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshVTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOFF/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOBJ/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshGifti/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/GIFTI/src/gifticlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/znzlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/niftilib -IModules/ThirdParty/Expat/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshFreeSurfer/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshBYU/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/I
O/MeshBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Voronoi/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/QuadEdgeMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG/include -IModules/ThirdParty/JPEG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GIPL/include -IModules/ThirdParty/ZLIB/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GDCM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BMP/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include -IModules/IO/ImageBase -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/AnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGrid/include -
I/wrkdirs/usr/ports/science/InsightToolkit/w!
ork/ITK-5!
.0.1/Modules/Core/ImageFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Statistics/include -IModules/ThirdParty/Netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/ImageAdaptors/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/CurvatureFlow/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/FiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include -IModules/Core/Common -IModules/ThirdParty/VNL/src/vxl/core -IModules/ThirdParty/VNL/src/vxl/vcl -IModules/ThirdParty/VNL/src/vxl/v3p/netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core -I/wrkdirs/usr/ports/science/I
nsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/vcl -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -IModules/ThirdParty/KWSys/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/KWIML/src -IModules/ThirdParty/KWIML/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/Eigen3/src -IModules/ThirdParty/Eigen3/src -IModules/ThirdParty/DoubleConversion/src/double-conversion -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DoubleConversion/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl -IModules/ThirdParty/NIFTI/src/nifti/znzlib -IModules/ThirdParty/NIFTI/src/nifti/niftilib -isystem /usr/local/include -isystem /usr/local/include/gdcm-3.0 -isystem /usr/local/include/eigen3 -O2 -pipe
-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/ImageRegistration15.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/ImageRegistration15.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/ImageRegistration15.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration15.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration15.cxx:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkImage.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkNeighborhoodAccessorFunctor.h:22:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkImageBase.h:34:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5482/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/ImageRegistration15.dir/ImageRegistration15.cxx.o -o bin/ImageRegistration15 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm lib/libITKI
OBruker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPEG-5.0.so.1
lib/libITKQuadEdgeMesh-5.0.so.1 lib/libITKI!
OMeta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 lib/libITKSpat
ialObjects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5483/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
ITK-5.0.1/Modules/ThirdParty/libLBFGS/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Watersheds/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Bridge/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/SpatialFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/RegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/QuadEdgeMeshFiltering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LabelVoting/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/KLMRegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageNoise/include -I/wrkdirs/usr/ports/science/InsightT
oolkit/work/ITK-5.0.1/Modules/Filtering/Imag!
eFusion/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFrequency/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMatlab/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformInsightLegacy/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformHDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformFactory/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Stimulate/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/XML/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK
-5.0.1/Modules/IO/RAW/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MRC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/volume_io/Include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libsrc2 -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libcommon -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC -IModules/ThirdParty/MINC -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/LSM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG2000/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/OpenJPEG/src/openjpeg -IModule
s/ThirdParty/OpenJPEG/src/openjpeg -I/wrkdir!
s/usr/por!
ts/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/HDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Siemens/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GE/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/IPL/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/CSV/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Bruker/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BioRad/include -IModules/ThirdParty/HDF5/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUThresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUPDEDeformable/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/PDEDeformable/inc
lude -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUAnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUFiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Eigen/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DisplacementField/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DiffusionTensorImage/include -I/wrkdirs/usr
/ports/science/InsightToolkit/work/ITK-5.0.1!
/Modules/!
Filtering/Denoising/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/DeformableMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Deconvolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DICOMParser/src/DICOMParser -IModules/ThirdParty/DICOMParser/src/DICOMParser -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Convolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FFT/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Colormap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Classifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BiasCorrection/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Polynomials/include -I/wrkdirs/usr/ports/science/Insight
Toolkit/work/ITK-5.0.1/Modules/Filtering/AntiAlias/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSets/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SignedDistanceFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFeature/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageSources/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGradient/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Smoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompare/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FastMarching/include -I/wrkdirs/usr/ports/science/InsightToolkit/work
/ITK-5.0.1/Modules/Filtering/DistanceMap/inc!
lude -I/w!
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de -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompose/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/TestKernel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TIFF/include -IModules/ThirdParty/TIFF/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/PNG/include -IModules/ThirdParty/PNG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NRRD/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NrrdIO/src/NrrdIO -IModules/ThirdParty/NrrdIO/src/NrrdIO -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NIFTI/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Meta/include -I/wrkdirs/usr/port
s/science/InsightToolkit/work/ITK-5.0.1/Modu!
les/Third!
Party/MetaIO/src/MetaIO/src -IModules/ThirdParty/MetaIO/src/MetaIO/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshVTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOFF/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOBJ/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshGifti/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/GIFTI/src/gifticlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/znzlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/niftilib -IModules/ThirdParty/Expat/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshFreeSurfer/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshBYU/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/I
O/MeshBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Voronoi/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/QuadEdgeMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG/include -IModules/ThirdParty/JPEG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GIPL/include -IModules/ThirdParty/ZLIB/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GDCM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BMP/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include -IModules/IO/ImageBase -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/AnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGrid/include -
I/wrkdirs/usr/ports/science/InsightToolkit/w!
ork/ITK-5!
.0.1/Modules/Core/ImageFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Statistics/include -IModules/ThirdParty/Netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/ImageAdaptors/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/CurvatureFlow/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/FiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include -IModules/Core/Common -IModules/ThirdParty/VNL/src/vxl/core -IModules/ThirdParty/VNL/src/vxl/vcl -IModules/ThirdParty/VNL/src/vxl/v3p/netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core -I/wrkdirs/usr/ports/science/I
nsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/vcl -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -IModules/ThirdParty/KWSys/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/KWIML/src -IModules/ThirdParty/KWIML/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/Eigen3/src -IModules/ThirdParty/Eigen3/src -IModules/ThirdParty/DoubleConversion/src/double-conversion -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DoubleConversion/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl -IModules/ThirdParty/NIFTI/src/nifti/znzlib -IModules/ThirdParty/NIFTI/src/nifti/niftilib -isystem /usr/local/include -isystem /usr/local/include/gdcm-3.0 -isystem /usr/local/include/eigen3 -O2 -pipe
-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/ImageRegistration4.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/ImageRegistration4.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/ImageRegistration4.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration4.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration4.cxx:43:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkCompositeTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkMultiTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkTransform.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5484/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/ImageRegistration4.dir/ImageRegistration4.cxx.o -o bin/ImageRegistration4 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm lib/libITKIOBr
uker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPEG-5.0.so.1 lib
/libITKQuadEdgeMesh-5.0.so.1 lib/libITKIOMe!
ta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 lib/libITKSpatial
Objects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5485/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
ITK-5.0.1/Modules/ThirdParty/libLBFGS/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Watersheds/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Bridge/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/SpatialFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/RegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/QuadEdgeMeshFiltering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LabelVoting/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/KLMRegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageNoise/include -I/wrkdirs/usr/ports/science/InsightT
oolkit/work/ITK-5.0.1/Modules/Filtering/Imag!
eFusion/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFrequency/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMatlab/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformInsightLegacy/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformHDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformFactory/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Stimulate/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/XML/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK
-5.0.1/Modules/IO/RAW/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MRC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/volume_io/Include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libsrc2 -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libcommon -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC -IModules/ThirdParty/MINC -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/LSM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG2000/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/OpenJPEG/src/openjpeg -IModule
s/ThirdParty/OpenJPEG/src/openjpeg -I/wrkdir!
s/usr/por!
ts/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/HDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Siemens/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GE/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/IPL/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/CSV/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Bruker/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BioRad/include -IModules/ThirdParty/HDF5/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUThresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUPDEDeformable/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/PDEDeformable/inc
lude -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUAnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUFiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Eigen/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DisplacementField/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DiffusionTensorImage/include -I/wrkdirs/usr
/ports/science/InsightToolkit/work/ITK-5.0.1!
/Modules/!
Filtering/Denoising/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/DeformableMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Deconvolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DICOMParser/src/DICOMParser -IModules/ThirdParty/DICOMParser/src/DICOMParser -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Convolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FFT/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Colormap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Classifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BiasCorrection/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Polynomials/include -I/wrkdirs/usr/ports/science/Insight
Toolkit/work/ITK-5.0.1/Modules/Filtering/AntiAlias/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSets/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SignedDistanceFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFeature/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageSources/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGradient/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Smoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompare/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FastMarching/include -I/wrkdirs/usr/ports/science/InsightToolkit/work
/ITK-5.0.1/Modules/Filtering/DistanceMap/inc!
lude -I/w!
rkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/NarrowBand/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BinaryMathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/MathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/ConnectedComponents/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Thresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/LabelMap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageLabel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageIntensity/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Path/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageStatistics/inclu
de -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompose/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/TestKernel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TIFF/include -IModules/ThirdParty/TIFF/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/PNG/include -IModules/ThirdParty/PNG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NRRD/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NrrdIO/src/NrrdIO -IModules/ThirdParty/NrrdIO/src/NrrdIO -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NIFTI/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Meta/include -I/wrkdirs/usr/port
s/science/InsightToolkit/work/ITK-5.0.1/Modu!
les/Third!
Party/MetaIO/src/MetaIO/src -IModules/ThirdParty/MetaIO/src/MetaIO/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshVTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOFF/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOBJ/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshGifti/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/GIFTI/src/gifticlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/znzlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/niftilib -IModules/ThirdParty/Expat/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshFreeSurfer/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshBYU/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/I
O/MeshBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Voronoi/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/QuadEdgeMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG/include -IModules/ThirdParty/JPEG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GIPL/include -IModules/ThirdParty/ZLIB/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GDCM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BMP/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include -IModules/IO/ImageBase -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/AnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGrid/include -
I/wrkdirs/usr/ports/science/InsightToolkit/w!
ork/ITK-5!
.0.1/Modules/Core/ImageFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Statistics/include -IModules/ThirdParty/Netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/ImageAdaptors/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/CurvatureFlow/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/FiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include -IModules/Core/Common -IModules/ThirdParty/VNL/src/vxl/core -IModules/ThirdParty/VNL/src/vxl/vcl -IModules/ThirdParty/VNL/src/vxl/v3p/netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core -I/wrkdirs/usr/ports/science/I
nsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/vcl -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -IModules/ThirdParty/KWSys/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/KWIML/src -IModules/ThirdParty/KWIML/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/Eigen3/src -IModules/ThirdParty/Eigen3/src -IModules/ThirdParty/DoubleConversion/src/double-conversion -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DoubleConversion/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl -IModules/ThirdParty/NIFTI/src/nifti/znzlib -IModules/ThirdParty/NIFTI/src/nifti/niftilib -isystem /usr/local/include -isystem /usr/local/include/gdcm-3.0 -isystem /usr/local/include/eigen3 -O2 -pipe
-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/DeformableRegistration8.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/DeformableRegistration8.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/DeformableRegistration8.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/DeformableRegistration8.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/DeformableRegistration8.cxx:32:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkCompositeTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkMultiTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkTransform.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5486/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/DeformableRegistration8.dir/DeformableRegistration8.cxx.o -o bin/DeformableRegistration8 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm
lib/libITKIOBruker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPE
G-5.0.so.1 lib/libITKQuadEdgeMesh-5.0.so.1 !
lib/libITKIOMeta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 li
b/libITKSpatialObjects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5487/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
ITK-5.0.1/Modules/ThirdParty/libLBFGS/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Watersheds/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Bridge/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/SpatialFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/RegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/QuadEdgeMeshFiltering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LabelVoting/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/KLMRegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageNoise/include -I/wrkdirs/usr/ports/science/InsightT
oolkit/work/ITK-5.0.1/Modules/Filtering/Imag!
eFusion/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFrequency/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMatlab/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformInsightLegacy/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformHDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformFactory/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Stimulate/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/XML/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK
-5.0.1/Modules/IO/RAW/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MRC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/volume_io/Include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libsrc2 -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libcommon -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC -IModules/ThirdParty/MINC -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/LSM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG2000/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/OpenJPEG/src/openjpeg -IModule
s/ThirdParty/OpenJPEG/src/openjpeg -I/wrkdir!
s/usr/por!
ts/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/HDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Siemens/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GE/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/IPL/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/CSV/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Bruker/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BioRad/include -IModules/ThirdParty/HDF5/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUThresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUPDEDeformable/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/PDEDeformable/inc
lude -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUAnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUFiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Eigen/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DisplacementField/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DiffusionTensorImage/include -I/wrkdirs/usr
/ports/science/InsightToolkit/work/ITK-5.0.1!
/Modules/!
Filtering/Denoising/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/DeformableMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Deconvolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DICOMParser/src/DICOMParser -IModules/ThirdParty/DICOMParser/src/DICOMParser -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Convolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FFT/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Colormap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Classifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BiasCorrection/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Polynomials/include -I/wrkdirs/usr/ports/science/Insight
Toolkit/work/ITK-5.0.1/Modules/Filtering/AntiAlias/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSets/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SignedDistanceFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFeature/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageSources/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGradient/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Smoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompare/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FastMarching/include -I/wrkdirs/usr/ports/science/InsightToolkit/work
/ITK-5.0.1/Modules/Filtering/DistanceMap/inc!
lude -I/w!
rkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/NarrowBand/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BinaryMathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/MathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/ConnectedComponents/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Thresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/LabelMap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageLabel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageIntensity/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Path/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageStatistics/inclu
de -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompose/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/TestKernel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TIFF/include -IModules/ThirdParty/TIFF/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/PNG/include -IModules/ThirdParty/PNG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NRRD/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NrrdIO/src/NrrdIO -IModules/ThirdParty/NrrdIO/src/NrrdIO -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NIFTI/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Meta/include -I/wrkdirs/usr/port
s/science/InsightToolkit/work/ITK-5.0.1/Modu!
les/Third!
Party/MetaIO/src/MetaIO/src -IModules/ThirdParty/MetaIO/src/MetaIO/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshVTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOFF/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOBJ/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshGifti/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/GIFTI/src/gifticlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/znzlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/niftilib -IModules/ThirdParty/Expat/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshFreeSurfer/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshBYU/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/I
O/MeshBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Voronoi/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/QuadEdgeMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG/include -IModules/ThirdParty/JPEG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GIPL/include -IModules/ThirdParty/ZLIB/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GDCM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BMP/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include -IModules/IO/ImageBase -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/AnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGrid/include -
I/wrkdirs/usr/ports/science/InsightToolkit/w!
ork/ITK-5!
.0.1/Modules/Core/ImageFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Statistics/include -IModules/ThirdParty/Netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/ImageAdaptors/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/CurvatureFlow/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/FiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include -IModules/Core/Common -IModules/ThirdParty/VNL/src/vxl/core -IModules/ThirdParty/VNL/src/vxl/vcl -IModules/ThirdParty/VNL/src/vxl/v3p/netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core -I/wrkdirs/usr/ports/science/I
nsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/vcl -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -IModules/ThirdParty/KWSys/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/KWIML/src -IModules/ThirdParty/KWIML/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/Eigen3/src -IModules/ThirdParty/Eigen3/src -IModules/ThirdParty/DoubleConversion/src/double-conversion -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DoubleConversion/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl -IModules/ThirdParty/NIFTI/src/nifti/znzlib -IModules/ThirdParty/NIFTI/src/nifti/niftilib -isystem /usr/local/include -isystem /usr/local/include/gdcm-3.0 -isystem /usr/local/include/eigen3 -O2 -pipe
-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/ImageRegistration14.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/ImageRegistration14.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/ImageRegistration14.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration14.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration14.cxx:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include/itkImageRegistrationMethod.h:22:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkImage.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkNeighborhoodAccessorFunctor.h:22:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkImageBase.h:34:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5488/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/ImageRegistration14.dir/ImageRegistration14.cxx.o -o bin/ImageRegistration14 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm lib/libITKI
OBruker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPEG-5.0.so.1
lib/libITKQuadEdgeMesh-5.0.so.1 lib/libITKI!
OMeta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 lib/libITKSpat
ialObjects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5489/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
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oolkit/work/ITK-5.0.1/Modules/Filtering/Imag!
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-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/ImageRegistration13.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/ImageRegistration13.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/ImageRegistration13.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration13.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration13.cxx:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkCompositeTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkMultiTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkTransform.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5490/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/ImageRegistration13.dir/ImageRegistration13.cxx.o -o bin/ImageRegistration13 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm lib/libITKI
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-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
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In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration11.cxx:38:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkCompositeTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkMultiTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkTransform.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5492/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/ImageRegistration11.dir/ImageRegistration11.cxx.o -o bin/ImageRegistration11 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm lib/libITKI
OBruker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPEG-5.0.so.1
lib/libITKQuadEdgeMesh-5.0.so.1 lib/libITKI!
OMeta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 lib/libITKSpat
ialObjects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
[5493/5516] /usr/bin/c++ -DITK_IO_FACTORY_REGISTER_MANAGER -IExamples/ITKFactoryRegistration -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Filtering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/IO/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Video/Core/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SuperPixel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Nonunit/Review/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Metricsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizersv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSetsv4/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/
ITK-5.0.1/Modules/ThirdParty/libLBFGS/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Watersheds/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Bridge/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/SpatialFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/RegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/QuadEdgeMeshFiltering/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/MarkovRandomFieldsClassifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LabelVoting/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/KLMRegionGrowing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageNoise/include -I/wrkdirs/usr/ports/science/InsightT
oolkit/work/ITK-5.0.1/Modules/Filtering/Imag!
eFusion/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFrequency/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMatlab/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformMINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformInsightLegacy/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformHDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TransformFactory/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Stimulate/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/XML/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK
-5.0.1/Modules/IO/RAW/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MRC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MINC/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/volume_io/Include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libsrc2 -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc/libcommon -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC/src/libminc -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/MINC -IModules/ThirdParty/MINC -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/LSM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG2000/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/OpenJPEG/src/openjpeg -IModule
s/ThirdParty/OpenJPEG/src/openjpeg -I/wrkdir!
s/usr/por!
ts/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/HDF5/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Siemens/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GE/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/IPL/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/CSV/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Bruker/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BioRad/include -IModules/ThirdParty/HDF5/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUThresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUPDEDeformable/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/PDEDeformable/inc
lude -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/Common/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/GPUAnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUFiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/GPUCommon/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Eigen/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DisplacementField/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/DiffusionTensorImage/include -I/wrkdirs/usr
/ports/science/InsightToolkit/work/ITK-5.0.1!
/Modules/!
Filtering/Denoising/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/DeformableMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Deconvolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DICOMParser/src/DICOMParser -IModules/ThirdParty/DICOMParser/src/DICOMParser -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Convolution/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FFT/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Colormap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Classifiers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BiasCorrection/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Polynomials/include -I/wrkdirs/usr/ports/science/Insight
Toolkit/work/ITK-5.0.1/Modules/Filtering/AntiAlias/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/LevelSets/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/SignedDistanceFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Optimizers/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFeature/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageSources/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGradient/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Smoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompare/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/FastMarching/include -I/wrkdirs/usr/ports/science/InsightToolkit/work
/ITK-5.0.1/Modules/Filtering/DistanceMap/inc!
lude -I/w!
rkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/NarrowBand/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/BinaryMathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/MathematicalMorphology/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/ConnectedComponents/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Thresholding/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/LabelMap/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageLabel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageIntensity/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/Path/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageStatistics/inclu
de -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/SpatialObjects/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageCompose/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/TestKernel/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/VTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/TIFF/include -IModules/ThirdParty/TIFF/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/PNG/include -IModules/ThirdParty/PNG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NRRD/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NrrdIO/src/NrrdIO -IModules/ThirdParty/NrrdIO/src/NrrdIO -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/NIFTI/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/Meta/include -I/wrkdirs/usr/port
s/science/InsightToolkit/work/ITK-5.0.1/Modu!
les/Third!
Party/MetaIO/src/MetaIO/src -IModules/ThirdParty/MetaIO/src/MetaIO/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshVTK/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOFF/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshOBJ/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshGifti/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/GIFTI/src/gifticlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/znzlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/NIFTI/src/nifti/niftilib -IModules/ThirdParty/Expat/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshFreeSurfer/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/MeshBYU/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/I
O/MeshBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Segmentation/Voronoi/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/QuadEdgeMesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Mesh/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/JPEG/include -IModules/ThirdParty/JPEG/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GIPL/include -IModules/ThirdParty/ZLIB/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/GDCM/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/BMP/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/IO/ImageBase/include -IModules/IO/ImageBase -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/AnisotropicSmoothing/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageGrid/include -
I/wrkdirs/usr/ports/science/InsightToolkit/w!
ork/ITK-5!
.0.1/Modules/Core/ImageFunction/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Numerics/Statistics/include -IModules/ThirdParty/Netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/ImageAdaptors/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/CurvatureFlow/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Filtering/ImageFilterBase/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/FiniteDifference/include -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include -IModules/Core/Common -IModules/ThirdParty/VNL/src/vxl/core -IModules/ThirdParty/VNL/src/vxl/vcl -IModules/ThirdParty/VNL/src/vxl/v3p/netlib -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core -I/wrkdirs/usr/ports/science/I
nsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/vcl -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/v3p/netlib -IModules/ThirdParty/KWSys/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/KWIML/src -IModules/ThirdParty/KWIML/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/Eigen3/src -IModules/ThirdParty/Eigen3/src -IModules/ThirdParty/DoubleConversion/src/double-conversion -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/DoubleConversion/src -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo -I/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl -IModules/ThirdParty/NIFTI/src/nifti/znzlib -IModules/ThirdParty/NIFTI/src/nifti/niftilib -isystem /usr/local/include -isystem /usr/local/include/gdcm-3.0 -isystem /usr/local/include/eigen3 -O2 -pipe
-fstack-protector-strong -fno-strict-aliasi!
ng -mtun!
e=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIE -pthread -std=c++11 -MD -MT Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/ImageRegistration7.cxx.o -MF Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/ImageRegistration7.cxx.o.d -o Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/ImageRegistration7.cxx.o -c /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration7.cxx
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Examples/RegistrationITKv4/ImageRegistration7.cxx:56:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Registration/RegistrationMethodsv4/include/itkImageRegistrationMethodv4.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkCompositeTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkMultiTransform.h:21:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Transform/include/itkTransform.h:23:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkSymmetricSecondRankTensor.h:28:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/Core/Common/include/itkMatrix.h:27:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_matrix_inverse.h:15:
In file included from /wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/algo/vnl_svd.h:22:
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:149:5: warning: misleading indentation; statement is not part of the previous 'if' [-Wmisleading-indentation]
return diagonal_[r];
^
/wrkdirs/usr/ports/science/InsightToolkit/work/ITK-5.0.1/Modules/ThirdParty/VNL/src/vxl/core/vnl/vnl_diag_matrix.h:146:3: note: previous statement is here
if (r >= this->size()) // If invalid size specified
^
1 warning generated.
[5494/5516] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -mtune=native -Wall -Wcast-align -Wdisabled-optimization -Wextra -Wformat=2 -Winvalid-pch -Wno-format-nonliteral -Wpointer-arith -Wshadow -Wunused -Wwrite-strings -funit-at-a-time -Wno-strict-overflow -Wno-deprecated -Wno-invalid-offsetof -Wno-undefined-var-template -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fstack-protector-strong -fPIE -pie Examples/RegistrationITKv4/CMakeFiles/ImageRegistration7.dir/ImageRegistration7.cxx.o -o bin/ImageRegistration7 -L/usr/local/lib -Wl,-rpath,/usr/local/lib:/wrkdirs/usr/ports/science/InsightToolkit/work/.build/lib /usr/lib/libz.so /usr/local/lib/libjpeg.so /usr/local/lib/libexpat.so /usr/local/lib/libpng.so /usr/local/lib/libtiff.so lib/libITKTestKernel-5.0.so.1 lib/libITKDICOMParser-5.0.so.1 /usr/local/lib/libgtest.so /usr/local/lib/libgtest_main.so -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lm lib/libITKIOBr
uker-5.0.so.1 lib/libITKIOCSV-5.0.so.1 lib/libITKIOHDF5-5.0.so.1 lib/libITKIOJPEG2000-5.0.so.1 lib/libITKIOLSM-5.0.so.1 lib/libITKIOMRC-5.0.so.1 lib/libITKIOTransformMINC-5.0.so.1 lib/libITKOptimizersv4-5.0.so.1 lib/libITKReview-5.0.so.1 lib/libITKVideoIO-5.0.so.1 lib/libITKIOMeshBYU-5.0.so.1 lib/libITKIOMeshFreeSurfer-5.0.so.1 lib/libITKIOMeshGifti-5.0.so.1 lib/libITKgiftiio-5.0.so.1 /usr/local/lib/libexpat.so lib/libITKIOMeshOBJ-5.0.so.1 lib/libITKIOMeshOFF-5.0.so.1 lib/libITKIOMeshVTK-5.0.so.1 lib/libITKIOMeshBase-5.0.so.1 /usr/local/lib/libgtest.so lib/libITKIOMINC-5.0.so.1 lib/libitkminc2-5.0.so.1 -lhdf5_cpp -lhdf5 -lsz -lz -ldl -lrt lib/libitklbfgs-5.0.so.1 lib/libITKIOBMP-5.0.so.1 lib/libITKIOGDCM-5.0.so.1 /usr/local/lib/libgdcmMSFF.so.3.0.5 /usr/local/lib/libgdcmDICT.so.3.0.5 /usr/local/lib/libgdcmIOD.so.3.0.5 /usr/local/lib/libgdcmDSED.so.3.0.5 /usr/local/lib/libgdcmCommon.so.3.0.5 lib/libITKIOGIPL-5.0.so.1 lib/libITKIOJPEG-5.0.so.1 lib
/libITKQuadEdgeMesh-5.0.so.1 lib/libITKIOMe!
ta-5.0.so.1 lib/libITKMetaIO-5.0.so.1 lib/libITKIONIFTI-5.0.so.1 lib/libITKniftiio-5.0.so.1 lib/libITKznz-5.0.so.1 lib/libITKIONRRD-5.0.so.1 lib/libITKNrrdIO-5.0.so.1 /usr/lib/libz.so lib/libITKIOPNG-5.0.so.1 lib/libITKIOTIFF-5.0.so.1 lib/libITKIOVTK-5.0.so.1 lib/libITKLabelMap-5.0.so.1 lib/libITKOptimizers-5.0.so.1 lib/libITKPolynomials-5.0.so.1 lib/libITKBiasCorrection-5.0.so.1 lib/libITKIOBioRad-5.0.so.1 lib/libITKIOGE-5.0.so.1 lib/libITKIOSiemens-5.0.so.1 lib/libITKIOIPL-5.0.so.1 lib/libitkopenjpeg-5.0.so.1 lib/libITKIOSpatialObjects-5.0.so.1 lib/libITKIOXML-5.0.so.1 lib/libITKIOStimulate-5.0.so.1 lib/libITKIOTransformHDF5-5.0.so.1 lib/libITKIOTransformInsightLegacy-5.0.so.1 lib/libITKIOTransformMatlab-5.0.so.1 lib/libITKIOTransformBase-5.0.so.1 lib/libITKTransformFactory-5.0.so.1 lib/libITKKLMRegionGrowing-5.0.so.1 lib/libITKVTK-5.0.so.1 lib/libITKWatersheds-5.0.so.1 lib/libITKStatistics-5.0.so.1 lib/libitkNetlibSlatec-5.0.so.1 lib/libITKSpatial
Objects-5.0.so.1 lib/libITKMesh-5.0.so.1 lib/libITKTransform-5.0.so.1 lib/libITKPath-5.0.so.1 lib/libITKIOImageBase-5.0.so.1 lib/libITKVideoCore-5.0.so.1 lib/libITKCommon-5.0.so.1 lib/libitkdouble-conversion-5.0.so.1 lib/libitksys-5.0.so.1 /usr/lib/libexecinfo.so lib/libITKVNLInstantiation-5.0.so.1 lib/libitkvnl_algo-5.0.so.1 lib/libitkvnl-5.0.so.1 lib/libitkv3p_netlib-5.0.so.1 lib/libitknetlib-5.0.so.1 lib/libitkvcl-5.0.so.1 -lm -pthread -lm -Wl,-rpath-link,/usr/local/lib && :
=>> Killing timed out build after 144000 seconds
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