[exp - 120amd64-default-build-as-user][science/gromacs] Failed for gromacs-2020 in build
pkg-fallout at FreeBSD.org
pkg-fallout at FreeBSD.org
Tue Jan 21 11:21:19 UTC 2020
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri at FreeBSD.org
Last committer: yuri at FreeBSD.org
Ident: $FreeBSD: head/science/gromacs/Makefile 522739 2020-01-12 01:13:06Z yuri $
Log URL: http://package19.nyi.freebsd.org/data/120amd64-default-build-as-user/523599/logs/gromacs-2020.log
Build URL: http://package19.nyi.freebsd.org/build.html?mastername=120amd64-default-build-as-user&build=523599
Log:
=>> Building science/gromacs
build started at Tue Jan 21 11:19:53 UTC 2020
port directory: /usr/ports/science/gromacs
package name: gromacs-2020
building for: FreeBSD 120amd64-default-build-as-user-job-11 12.0-RELEASE-p12 FreeBSD 12.0-RELEASE-p12 amd64
maintained by: yuri at FreeBSD.org
Makefile ident: $FreeBSD: head/science/gromacs/Makefile 522739 2020-01-12 01:13:06Z yuri $
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===> The following configuration options are available for gromacs-2020:
ATLAS=off: Use ATLAS for BLAS and LAPACK
FLOAT=on: Use single instead of double precision
OPENCL=off: Heterogeneous computing via OpenCL
OPENMP=on: Parallel processing support via OpenMP
SIMD=off: Use CPU-specific optimizations
X11=on: X11 (graphics) support
====> Multiprocessing: you have to select exactly one of them
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MPICH=off: Parallel processing support via MPICH
OPENMPI=off: Parallel processing support via Open MPI
THREAD_MPI=on: Build a thread-MPI-based multithreaded version of GROMACS
===> Use 'make config' to modify these settings
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=======================<phase: check-sanity >============================
===> License LGPL21 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> gromacs-2020 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.12.0.txz
[120amd64-default-build-as-user-job-11] Installing pkg-1.12.0...
[120amd64-default-build-as-user-job-11] Extracting pkg-1.12.0: .......... done
===> gromacs-2020 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of gromacs-2020
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License LGPL21 accepted by the user
===> Fetching all distfiles required by gromacs-2020 for building
===========================================================================
=======================<phase: checksum >============================
===> License LGPL21 accepted by the user
===> Fetching all distfiles required by gromacs-2020 for building
=> SHA256 Checksum OK for gromacs-2020.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License LGPL21 accepted by the user
===> Fetching all distfiles required by gromacs-2020 for building
===> Extracting for gromacs-2020
=> SHA256 Checksum OK for gromacs-2020.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for gromacs-2020
===> Applying FreeBSD patches for gromacs-2020
===========================================================================
=======================<phase: build-depends >============================
===> gromacs-2020 depends on package: boost-libs>=1.44 - not found
===> Installing existing package /packages/All/boost-libs-1.72.0.txz
[120amd64-default-build-as-user-job-11] Installing boost-libs-1.72.0...
[120amd64-default-build-as-user-job-11] `-- Installing icu-65.1,1...
[120amd64-default-build-as-user-job-11] `-- Extracting icu-65.1,1: .......... done
[120amd64-default-build-as-user-job-11] Extracting boost-libs-1.72.0: .......... done
=====
Message from boost-libs-1.72.0:
--
<snip>
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/collective.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/collective.cpp
[ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/profile.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/profile.cpp
[ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/comm.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/comm.cpp
[ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/reduce.cpp
[ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/event.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/event.cpp
[ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/reduce_fast.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/reduce_fast.cpp
[ 4%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/gather.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/gather.cpp
[ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scatter.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/scatter.cpp
[ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/group.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/group.cpp
[ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/tmpi_init.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/tmpi_init.cpp
[ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/topology.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/topology.cpp
[ 5%] Building CXX object src/gromacs/CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/list.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/list.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/type.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/type.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/scan.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/scan.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/numa_malloc.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/numa_malloc.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/thread_mpi.dir/__/external/thread_mpi/src/once.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/src/once.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020 /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra /wrkdirs/usr/ports/science/gromacs/work/.build /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/DependInfo.cmake
Scanning dependencies of target linearalgebra
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/eigensolver.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/eigensolver.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/gmx_arpack.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/gmx_arpack.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/matrix.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/matrix.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/nrjac.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/nrjac.cpp
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/linearalgebra && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -std=c++14 -o CMakeFiles/linearalgebra.dir/sparsematrix.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/linearalgebra/sparsematrix.cpp
[ 5%] Built target linearalgebra
/usr/bin/make -f src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/build.make src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/depend
cd /wrkdirs/usr/ports/science/gromacs/work/.build && /usr/local/bin/cmake -E cmake_depends "Unix Makefiles" /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020 /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator /wrkdirs/usr/ports/science/gromacs/work/.build /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/DependInfo.cmake
Scanning dependencies of target modularsimulator
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cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/checkpointhelper.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/checkpointhelper.cpp
[ 5%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/compositesimulatorelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/compositesimulatorelement.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/computeglobalselement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/computeglobalselement.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/constraintelement.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/constraintelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/constraintelement.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/domdechelper.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/domdechelper.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/domdechelper.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/energyelement.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/energyelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/energyelement.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/forceelement.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/forceelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/forceelement.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/freeenergyperturbationelement.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/freeenergyperturbationelement.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/freeenergyperturbationelement.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/modularsimulator.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/modularsimulator.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/parrinellorahmanbarostat.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/parrinellorahmanbarostat.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/pmeloadbalancehelper.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/pmeloadbalancehelper.cpp
[ 7%] Building CXX object src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/propagator.cpp.o
cd /wrkdirs/usr/ports/science/gromacs/work/.build/src/gromacs/modularsimulator && /usr/bin/c++ -DGMX_DOUBLE=0 -DHAVE_CONFIG_H -I/wrkdirs/usr/ports/science/gromacs/work/.build/src -I/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src -isystem /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/external/thread_mpi/include -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fopenmp=libomp -I/usr/local/include -Wno-redundant-move -std=c++14 -o CMakeFiles/modularsimulator.dir/propagator.cpp.o -c /wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:471:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocitiesOnly>::run<gmx::NumVelocityScalingValues::Single, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::Single, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:477:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocitiesOnly>::run<gmx::NumVelocityScalingValues::Single, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::Single, ParrinelloRahmanVelocityScaling::No>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:486:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocitiesOnly>::run<gmx::NumVelocityScalingValues::Multiple, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::Multiple, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:492:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocitiesOnly>::run<gmx::NumVelocityScalingValues::Multiple, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::Multiple, ParrinelloRahmanVelocityScaling::No>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:501:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocitiesOnly>::run<gmx::NumVelocityScalingValues::None, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::None, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:201:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:507:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocitiesOnly>::run<gmx::NumVelocityScalingValues::None, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::None, ParrinelloRahmanVelocityScaling::No>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:471:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::LeapFrog>::run<gmx::NumVelocityScalingValues::Single, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::Single, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:477:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::LeapFrog>::run<gmx::NumVelocityScalingValues::Single, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::Single, ParrinelloRahmanVelocityScaling::No>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:486:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::LeapFrog>::run<gmx::NumVelocityScalingValues::Multiple, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::Multiple, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:492:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::LeapFrog>::run<gmx::NumVelocityScalingValues::Multiple, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::Multiple, ParrinelloRahmanVelocityScaling::No>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:501:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::LeapFrog>::run<gmx::NumVelocityScalingValues::None, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::None, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:298:47: error: variable 'lambda' must have explicitly specified data sharing attributes
a, timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:507:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::LeapFrog>::run<gmx::NumVelocityScalingValues::None, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::None, ParrinelloRahmanVelocityScaling::No>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes
a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:471:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocityVerletPositionsAndVelocities>::run<gmx::NumVelocityScalingValues::Single, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::Single, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes
a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:477:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocityVerletPositionsAndVelocities>::run<gmx::NumVelocityScalingValues::Single, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::Single, ParrinelloRahmanVelocityScaling::No>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes
a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:486:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocityVerletPositionsAndVelocities>::run<gmx::NumVelocityScalingValues::Multiple, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::Multiple, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes
a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:492:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocityVerletPositionsAndVelocities>::run<gmx::NumVelocityScalingValues::Multiple, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::Multiple, ParrinelloRahmanVelocityScaling::No>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes
a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:501:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocityVerletPositionsAndVelocities>::run<gmx::NumVelocityScalingValues::None, gmx::ParrinelloRahmanVelocityScaling::Full>' requested here
run<NumVelocityScalingValues::None, ParrinelloRahmanVelocityScaling::Full>();
^
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:396:53: error: variable 'lambda' must have explicitly specified data sharing attributes
a, 0.5 * timestep_, lambda, invMassPerDim, v, f, diagPR, matrixPR);
^~~~~~
/wrkdirs/usr/ports/science/gromacs/work/gromacs-2020/src/gromacs/modularsimulator/propagator.cpp:507:17: note: in instantiation of function template specialization 'gmx::Propagator<gmx::IntegrationStep::VelocityVerletPositionsAndVelocities>::run<gmx::NumVelocityScalingValues::None, gmx::ParrinelloRahmanVelocityScaling::No>' requested here
run<NumVelocityScalingValues::None, ParrinelloRahmanVelocityScaling::No>();
^
18 errors generated.
*** Error code 1
Stop.
make[3]: stopped in /wrkdirs/usr/ports/science/gromacs/work/.build
*** Error code 1
Stop.
make[2]: stopped in /wrkdirs/usr/ports/science/gromacs/work/.build
*** Error code 1
Stop.
make[1]: stopped in /wrkdirs/usr/ports/science/gromacs/work/.build
*** Error code 1
Stop.
make: stopped in /usr/ports/science/gromacs
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