amd64/178537: avogadro upgrade to 1.1.0 problem

[Troy]

>Number:         178537
>Category:       amd64
>Synopsis:       avogadro upgrade to 1.1.0 problem
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    freebsd-amd64
>State:          open
>Quarter:        
>Keywords:       
>Date-Required:
>Class:          sw-bug
>Submitter-Id:   current-users
>Arrival-Date:   Sun May 12 17:30:00 UTC 2013
>Closed-Date:
>Last-Modified:
>Originator:     Troy
>Release:        9.1 Stable
>Organization:
>Environment:
FreeBSD xx.yy.net 9.1-STABLE FreeBSD 9.1-STABLE #1 r250333: Tue May  7 22:30:37 CDT 2013     foo at xx.yy.net:/usr/obj/usr/src/sys/OZ  amd64
>Description:
I tried to upgrade to 1.1.0 and it's failing. I contacted the named port maintainer Troels Jacobson and he said he no longer maintains the port.  I also posted it to the ports mailing list and got no responses.  

avogadro-1.0.3_2                    <   needs updating (port has 1.1.0)

[ 65%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/spectradialog.cpp.o
Linking CXX shared module ../../../../lib/crystallographyextension.so
/usr/bin/ld: spglib/libspglib.a(spglib.c.o): relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
spglib/libspglib.a: could not read symbols: Bad value
*** [lib/crystallographyextension.so] Error code 1
1 error
*** [libavogadro/src/extensions/crystallography/CMakeFiles/crystallographyextension.dir/all] Error code 2
[ 65%] Building CXX object libavogadro/src/extensions/spectra/CMakeFiles/spectraextension.dir/uv.cpp.o
Linking CXX shared module ../../../../lib/spectraextension.so
[ 65%] Built target spectraextension
1 error
*** [all] Error code 2
1 error
*** [do-build] Error code 1

Stop in /usr/ports/science/avogadro.
*** [build] Error code 1

Stop in /usr/ports/science/avogadro.
** Command failed [exit code 1]: /usr/bin/script -qa /tmp/portupgrade20130510-68389-1uxumdh-0 env UPGRADE_TOOL=portupgrade UPGRADE_PORT=avogadro-1.0.3_2 UPGRADE_PORT_VER=1.0.3_2 make
** Fix the problem and try again.
** Listing the failed packages (-:ignored / *:skipped / !:failed)
        ! science/avogadro (avogadro-1.0.3_2)   (unknown build error)
>How-To-Repeat:
Doing a portupgrade of avogardo-1.0.3_2 to 1.1.10 yields the output above.
>Fix:


>Release-Note:
>Audit-Trail:
>Unformatted: