git: 96d32d811873 - main - biology/biostar-tools: Add biology/kallisto run depend to metaport
Jason W. Bacon
jwb at FreeBSD.org
Mon Sep 27 12:17:32 UTC 2021
The branch main has been updated by jwb:
URL: https://cgit.FreeBSD.org/ports/commit/?id=96d32d811873af3c99e0e6380de7f6dba3603399
commit 96d32d811873af3c99e0e6380de7f6dba3603399
Author: Jason W. Bacon <jwb at FreeBSD.org>
AuthorDate: 2021-09-27 12:14:45 +0000
Commit: Jason W. Bacon <jwb at FreeBSD.org>
CommitDate: 2021-09-27 12:14:45 +0000
biology/biostar-tools: Add biology/kallisto run depend to metaport
Also clean up other deps for consistency
---
biology/biostar-tools/Makefile | 9 +++++----
biology/biostar-tools/distinfo | 2 +-
2 files changed, 6 insertions(+), 5 deletions(-)
diff --git a/biology/biostar-tools/Makefile b/biology/biostar-tools/Makefile
index 67ccc93ab5ad..820774928d6d 100644
--- a/biology/biostar-tools/Makefile
+++ b/biology/biostar-tools/Makefile
@@ -1,5 +1,5 @@
PORTNAME= biostar-tools
-PORTVERSION= 1.6.0
+PORTVERSION= 1.7.0
CATEGORIES= biology python
MAINTAINER= jwb at FreeBSD.org
@@ -24,8 +24,8 @@ RUN_DEPENDS= wget>0:ftp/wget \
picard-tools>0:biology/picard-tools \
bbmap>0:biology/bbmap \
minimap2>0:biology/minimap2 \
- bwa>=0:biology/bwa \
- bowtie2>=0:biology/bowtie2 \
+ bwa>0:biology/bwa \
+ bowtie2>0:biology/bowtie2 \
samtools>0:biology/samtools \
emboss>0:biology/emboss \
bedtools>0:biology/bedtools \
@@ -59,7 +59,8 @@ RUN_DEPENDS= wget>0:ftp/wget \
mafft>0:biology/mafft \
clustal-omega>0:biology/clustal-omega \
${PYTHON_PKGNAMEPREFIX}pywgsim>0:biology/py-pywgsim@${PY_FLAVOR} \
- sam2pairwise:biology/sam2pairwise
+ sam2pairwise>0:biology/sam2pairwise \
+ kallisto>0:biology/kallisto
USES= metaport python
diff --git a/biology/biostar-tools/distinfo b/biology/biostar-tools/distinfo
index eff441099c51..b4ad4f4ea3af 100644
--- a/biology/biostar-tools/distinfo
+++ b/biology/biostar-tools/distinfo
@@ -1 +1 @@
-TIMESTAMP = 1631047196
+TIMESTAMP = 1632744796
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