git: 256e9bc3b5b9 - main - biology/py-crossmap: Fix build with Python 3.8+
Kai Knoblich
kai at FreeBSD.org
Wed Apr 21 07:58:35 UTC 2021
The branch main has been updated by kai:
URL: https://cgit.FreeBSD.org/ports/commit/?id=256e9bc3b5b97069231e16e2be057e313e9bb7bc
commit 256e9bc3b5b97069231e16e2be057e313e9bb7bc
Author: Kai Knoblich <kai at FreeBSD.org>
AuthorDate: 2021-04-21 07:44:44 +0000
Commit: Kai Knoblich <kai at FreeBSD.org>
CommitDate: 2021-04-21 07:44:44 +0000
biology/py-crossmap: Fix build with Python 3.8+
* Add missing dependency devel/py-nose that is required to build. With
Python 3.6/3.7 there are no build issues because the sdist contains
Python Eggs of "nose" for these versions.
While I'm here:
* Set NO_ARCH because the port has no architecture specific files.
* Make it concurrent safe, package installs a script and bump
PORTREVISION due package change.
PR: 253815
Approved by: portmgr (build fix)
MFH: No (The port was added after the 2021Q1 branch)
---
biology/py-crossmap/Makefile | 6 +++++-
1 file changed, 5 insertions(+), 1 deletion(-)
diff --git a/biology/py-crossmap/Makefile b/biology/py-crossmap/Makefile
index 7946de949b5e..30b8bee8f5af 100644
--- a/biology/py-crossmap/Makefile
+++ b/biology/py-crossmap/Makefile
@@ -1,5 +1,6 @@
PORTNAME= crossmap
DISTVERSION= 0.5.2
+PORTREVISION= 1
CATEGORIES= biology python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@@ -11,11 +12,14 @@ COMMENT= Lift over genomics coordinates between assemblies
LICENSE= GPLv2
LICENSE_FILE= ${WRKSRC}/LICENSE.txt
+BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}nose>0.10.4:devel/py-nose@${PY_FLAVOR}
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}pysam>0:biology/py-pysam@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}bx-python>0:biology/py-bx-python@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}pyBigWig>0:biology/py-bigwig@${PY_FLAVOR}
USES= python:3.5+
-USE_PYTHON= autoplist cython distutils
+USE_PYTHON= autoplist concurrent cython distutils
+
+NO_ARCH= yes
.include <bsd.port.mk>
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