git: b9f16eadc90f - main - New port: biology/py-resdk: Resolwe SDK to interact with Resolwe server and Resolwe Bioinformatics

[Yuri Victorovich]

The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=b9f16eadc90f774bff9030ef7b8511ba1a392464

commit b9f16eadc90f774bff9030ef7b8511ba1a392464
Author:     Yuri Victorovich <yuri at FreeBSD.org>
AuthorDate: 2021-04-20 04:20:35 +0000
Commit:     Yuri Victorovich <yuri at FreeBSD.org>
CommitDate: 2021-04-20 04:22:01 +0000

    New port: biology/py-resdk: Resolwe SDK to interact with Resolwe server and Resolwe Bioinformatics
---
 biology/Makefile           |  1 +
 biology/py-resdk/Makefile  | 28 ++++++++++++++++++++++++++++
 biology/py-resdk/distinfo  |  3 +++
 biology/py-resdk/pkg-descr |  6 ++++++
 4 files changed, 38 insertions(+)

diff --git a/biology/Makefile b/biology/Makefile
index 7c6bfbddf1d1..53c31ac00b77 100644
--- a/biology/Makefile
+++ b/biology/Makefile
@@ -143,6 +143,7 @@
     SUBDIR += py-pandas-charm
     SUBDIR += py-pyfaidx
     SUBDIR += py-pysam
+    SUBDIR += py-resdk
     SUBDIR += py-scikit-bio
     SUBDIR += py-xenaPython
     SUBDIR += pyfasta
diff --git a/biology/py-resdk/Makefile b/biology/py-resdk/Makefile
new file mode 100644
index 000000000000..39fbbeb35e01
--- /dev/null
+++ b/biology/py-resdk/Makefile
@@ -0,0 +1,28 @@
+PORTNAME=	resdk
+DISTVERSION=	13.1.0
+CATEGORIES=	biology python
+MASTER_SITES=	CHEESESHOP
+PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
+
+MAINTAINER=	yuri at FreeBSD.org
+COMMENT=	Resolwe SDK to interact with Resolwe server and Resolwe Bioinformatics
+
+LICENSE=	BSD3CLAUSE
+
+RUN_DEPENDS=	\
+		${PYTHON_PKGNAMEPREFIX}openpyxl>0:textproc/py-openpyxl@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}pandas>=1.0.0:math/py-pandas@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}pytz>=2018.4:devel/py-pytz@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}requests>=2.6.0:www/py-requests@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}slumber>=0.7.1:www/py-slumber@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}tqdm>0:misc/py-tqdm@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}tzlocal>=1.5.1:devel/py-tzlocal@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}wrapt>0:devel/py-wrapt@${PY_FLAVOR} \
+		${PYTHON_PKGNAMEPREFIX}xlrd>0:textproc/py-xlrd@${PY_FLAVOR}
+
+USES=		python:3.6+
+USE_PYTHON=	distutils autoplist
+
+NO_ARCH=	yes
+
+.include <bsd.port.mk>
diff --git a/biology/py-resdk/distinfo b/biology/py-resdk/distinfo
new file mode 100644
index 000000000000..445f5f70e9d3
--- /dev/null
+++ b/biology/py-resdk/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1618889698
+SHA256 (resdk-13.1.0.tar.gz) = b1348484e93f93184574dab3677816b5a0e76ccbb25aab0fc1cf1728142ae7ce
+SIZE (resdk-13.1.0.tar.gz) = 219876
diff --git a/biology/py-resdk/pkg-descr b/biology/py-resdk/pkg-descr
new file mode 100644
index 000000000000..d256f8eb4962
--- /dev/null
+++ b/biology/py-resdk/pkg-descr
@@ -0,0 +1,6 @@
+Resolwe SDK for Python supports interaction with Resolwe server and its
+extension Resolwe Bioinformatics. You can use it to upload and inspect
+biomedical data sets, contribute annotations, run analysis, and write
+pipelines.
+
+WWW: https://github.com/genialis/resolwe-bio-py