git: 8e65beb783c9 - main - biology/abyss: Update 2.2.5 -> 2.3.0-3

[Yuri Victorovich]

The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=8e65beb783c9abf477fa85e8437600b6890d94b8

commit 8e65beb783c9abf477fa85e8437600b6890d94b8
Author:     Yuri Victorovich <yuri at FreeBSD.org>
AuthorDate: 2021-04-18 20:12:46 +0000
Commit:     Yuri Victorovich <yuri at FreeBSD.org>
CommitDate: 2021-04-18 20:19:56 +0000

    biology/abyss: Update 2.2.5 -> 2.3.0-3
---
 biology/abyss/Makefile  | 10 +++++++---
 biology/abyss/distinfo  |  6 +++---
 biology/abyss/pkg-plist |  1 +
 3 files changed, 11 insertions(+), 6 deletions(-)

diff --git a/biology/abyss/Makefile b/biology/abyss/Makefile
index 5f73249d04b0..89eefc25ee1e 100644
--- a/biology/abyss/Makefile
+++ b/biology/abyss/Makefile
@@ -1,5 +1,6 @@
 PORTNAME=	abyss
-DISTVERSION=	2.2.5
+DISTVERSION=	2.3.0-3
+DISTVERSIONSUFFIX=	-g25f5f66f
 CATEGORIES=	biology
 
 MAINTAINER=	yuri at FreeBSD.org
@@ -19,12 +20,15 @@ RUN_DEPENDS=	bash:shells/bash \
 		gmake:devel/gmake
 
 USES=		autoreconf compiler:c++11-lang gmake iconv:wchar_t localbase:ldflags shebangfix sqlite
+
+USE_GITHUB=	yes
+GH_ACCOUNT=	bcgsc
+
 SHEBANG_FILES=	bin/${PORTNAME}-* DataBase/abyss-db-txt
 SHEBANG_LANG=	make
 make_OLD_CMD=	/usr/bin/make
 make_CMD=	${PREFIX}/bin/gmake
-USE_GITHUB=	yes
-GH_ACCOUNT=	bcgsc
+
 GNU_CONFIGURE=	yes
 CONFIGURE_ARGS=	--without-sparsehash # configure fails to find std::hash, reported to the ML: https://groups.google.com/forum/#!topic/trans-abyss/SZDBKR5bKxs
 
diff --git a/biology/abyss/distinfo b/biology/abyss/distinfo
index a4623713ff5c..a02b1ba59ee9 100644
--- a/biology/abyss/distinfo
+++ b/biology/abyss/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1601189184
-SHA256 (bcgsc-abyss-2.2.5_GH0.tar.gz) = 1b85e1fdfb49f1ed4e00201cc55e9ccec93f812335104751bbf24b46e1264453
-SIZE (bcgsc-abyss-2.2.5_GH0.tar.gz) = 1698962
+TIMESTAMP = 1618769259
+SHA256 (bcgsc-abyss-2.3.0-3-g25f5f66f_GH0.tar.gz) = 6345363ad02480f019816eb02ee80a8683ef32415ff756f48c89b02d0c38f8e3
+SIZE (bcgsc-abyss-2.3.0-3-g25f5f66f_GH0.tar.gz) = 1531834
diff --git a/biology/abyss/pkg-plist b/biology/abyss/pkg-plist
index 9d33e624fff7..3e2d8eba7135 100644
--- a/biology/abyss/pkg-plist
+++ b/biology/abyss/pkg-plist
@@ -44,6 +44,7 @@ bin/abyss-mergepairs
 bin/abyss-overlap
 bin/abyss-paired-dbg
 bin/abyss-pe
+bin/abyss-rresolver-short
 bin/abyss-samtoafg
 bin/abyss-scaffold
 bin/abyss-sealer