cvs commit: ports/biology Makefile ports/biology/p5-Bio-NEXUS Makefile distinfo pkg-descr pkg-plist

Martin Wilke miwi at FreeBSD.org
Sat Aug 22 20:39:52 UTC 2009


miwi        2009-08-22 20:39:51 UTC

  FreeBSD ports repository

  Modified files:
    biology              Makefile 
  Added files:
    biology/p5-Bio-NEXUS Makefile distinfo pkg-descr pkg-plist 
  Log:
  Bio::NEXUS package provides an object-oriented, Perl-based
  applications programming interface (API) to the NEXUS file
  format of Maddison, et al., 1997 (Syst. Biol. 46:590-621).
  NEXUS is a powerful and extensible format designed for use
  in evolutionary analysis, including the analysis of molecular
  sequence data as well as classical morphological and life-history
  data. NEXUS is the input or output format for software such as
  PAUP*, MacClade, Mesquite, SIMMAP, MrBayes, Nexplorer, and
  so on.  This package also contains the demonstration applications
  nexplot.pl (plot character data with a tree) and nextool.pl
  (allowing programmatic editing, e.g., selecting particular
  clades or subsets of data).
  
  WWW: http://search.cpan.org/dist/Bio-NEXUS/
  
  PR:             ports/137983
  Submitted by:   Wen Heping <wenheping at gmail.com>
  
  Revision  Changes    Path
  1.112     +1 -0      ports/biology/Makefile
  1.1       +38 -0     ports/biology/p5-Bio-NEXUS/Makefile (new)
  1.1       +3 -0      ports/biology/p5-Bio-NEXUS/distinfo (new)
  1.1       +14 -0     ports/biology/p5-Bio-NEXUS/pkg-descr (new)
  1.1       +35 -0     ports/biology/p5-Bio-NEXUS/pkg-plist (new)


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