From nobody Sun Sep 10 06:53:11 2023 X-Original-To: ports-bugs@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4Rk0t02rDhz4sg8K for ; Sun, 10 Sep 2023 06:53:12 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4Rk0t0064pz3JMq for ; Sun, 10 Sep 2023 06:53:12 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1694328792; a=rsa-sha256; cv=none; b=EwOMOdRrF22bjDdsYM37NSTojzgcvOUGafLP1Jngs2BTkNoLakfHa5jP3uTxktL0SGIWZc MJi/iHe5TVjr8+gPmgmEbZOzvnF+Oq6u3Q7YBhTq3ukZiLzft7ty/3lV7EuQXLAhSBZKgm 36474/lnXeEKtqUq8FH9VsCF67cSdNuLSB3yG7OUynh3w3XS/nmEi/o2+ykD3dRSZBm+Of f5pYEWO7qupHdEkBO7qNDOSx5BYIur1lRMJVTN2iH+HkxonRaY5pdULs6ovKzgf9pmYtWF JTL81l2yPOjP1iXFNot2nJu0MPw5Jh+30ssPjnmr7Kp2KwVy2S8ulbAkLDHdJQ== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1694328792; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=LbnG8UdQWE2sZjfbPKuB3SjvZOVD1WvWKpP0UI/we0U=; b=yZFXGu+HUqjRWRm4zgFNAPgpoGqP4O8SXkym8MNiJko2M6rP0ZEfbm8EzHRkYaTuPCaLu5 vyQ0mjD86l57/XLsFTY0ZBn2GI/Jc5Xx1yGHZ1VR0rPtu95nb4ppY0w8f/TeuaMcXVWDuE 1rwAadt+zRRrmqOYSri/ZkKpXcCcOdDToYaTyIPilntB61nuk0g2HL8sjYwTra4rHa4lbi EeFxIeCC0UsTgwRVbhINGiMmB0k0VIaUA9ZBuNytcAqSVlEg7D5ccGy9tKBal2sLtRrXsP sT7ihxZOSGRwu1J4IuA1jTsMC0NaBmLOonPkOQj6QS5uv+UC3AzHAPMERGBT9Q== Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2610:1c1:1:606c::50:1d]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4Rk0sz6HjNzxJQ for ; Sun, 10 Sep 2023 06:53:11 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org ([127.0.1.5]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id 38A6rBco033715 for ; Sun, 10 Sep 2023 06:53:11 GMT (envelope-from bugzilla-noreply@freebsd.org) Received: (from www@localhost) by kenobi.freebsd.org (8.15.2/8.15.2/Submit) id 38A6rBXj033714 for ports-bugs@FreeBSD.org; Sun, 10 Sep 2023 06:53:11 GMT (envelope-from bugzilla-noreply@freebsd.org) X-Authentication-Warning: kenobi.freebsd.org: www set sender to bugzilla-noreply@freebsd.org using -f From: bugzilla-noreply@freebsd.org To: ports-bugs@FreeBSD.org Subject: [Bug 273670] biology/seqan3: Fails to build with GCC 13: The SDSL library is required, but wasn't found. Date: Sun, 10 Sep 2023 06:53:11 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: new X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: salvadore@freebsd.org X-Bugzilla-Status: New X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: yuri@freebsd.org X-Bugzilla-Flags: maintainer-feedback? X-Bugzilla-Changed-Fields: bug_id short_desc product version rep_platform op_sys bug_status bug_severity priority component assigned_to reporter blocked flagtypes.name Message-ID: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated List-Id: Ports bug reports List-Archive: https://lists.freebsd.org/archives/freebsd-ports-bugs List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-ports-bugs@freebsd.org X-BeenThere: freebsd-ports-bugs@freebsd.org MIME-Version: 1.0 https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D273670 Bug ID: 273670 Summary: biology/seqan3: Fails to build with GCC 13: The SDSL library is required, but wasn't found. Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Only Me Priority: --- Component: Individual Port(s) Assignee: yuri@freebsd.org Reporter: salvadore@freebsd.org Blocks: 273397 Assignee: yuri@freebsd.org Flags: maintainer-feedback?(yuri@freebsd.org) =3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D= =3D=3D=3D=3D=3D=3D=3D=3D=3D =3D=3D=3D> Configuring for seqan3-3.2.0_2 =3D=3D=3D> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/biology/seqan3/work/.build -- The CXX compiler identification is GNU 13.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/local/bin/g++13 - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- [1mFinding SeqAn3 and checking requirements:[m -- SeqAn3 include dir found:=20=20 /wrkdirs/usr/ports/biology/seqan3/work/seqan3-3.2.0/include -- Detected as running from a repository checkout=C3=A2=E2=82=AC=C2=A6 -- =C3=A2=E2=82=AC=C2=A6adding submodule include:=20 /wrkdirs/usr/ports/biology/seqan3/work/seqan3-3.2.0/submodules/sdsl-lite/in= clude -- C++ Standard-20 support: via -std=3Dc++20 -- C++ Concepts support: via -std=3Dc++20 -- Thread support: via -pthread CMake Error at build_system/seqan3-config.cmake:113 (message): The SDSL library is required, but wasn't found. Get it from https://github.com/xxsds/sdsl-lite Call Stack (most recent call first): build_system/seqan3-config.cmake:319 (seqan3_config_error) CMakeLists.txt:32 (find_package) -- Configuring incomplete, errors occurred! *** Error code 1 This page can be helpful: https://gcc.gnu.org/gcc-13/porting_to.html Referenced Bugs: https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D273397 [Bug 273397] [exp-run] Update GCC_DEFAULT to 13 etc. --=20 You are receiving this mail because: You are the assignee for the bug.=