[package - 141releng-armv7-quarterly][math/R-cran-XLConnect] Failed for R-cran-XLConnect-1.1.0 in stage
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Date: Fri, 07 Feb 2025 20:52:10 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: thierry@FreeBSD.org Log URL: https://pkg-status.freebsd.org/ampere1/data/141releng-armv7-quarterly/525876c27745/logs/R-cran-XLConnect-1.1.0.log Build URL: https://pkg-status.freebsd.org/ampere1/build.html?mastername=141releng-armv7-quarterly&build=525876c27745 Log: =>> Building math/R-cran-XLConnect build started at Fri Feb 7 20:51:32 UTC 2025 port directory: /usr/ports/math/R-cran-XLConnect package name: R-cran-XLConnect-1.1.0 building for: FreeBSD 141releng-armv7-quarterly-job-09 14.1-RELEASE-p7 FreeBSD 14.1-RELEASE-p7 1401000 arm maintained by: thierry@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1638 Jan 12 01:02 /usr/ports/math/R-cran-XLConnect/Makefile Ports top last git commit: 525876c27 Ports top unclean checkout: no Port dir last git commit: 93a86df99 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1500028 Jail OSVERSION: 1401000 Job Id: 09 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1401000 UNAME_v=FreeBSD 14.1-RELEASE-p7 1401000 UNAME_r=14.1-RELEASE-p7 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/141releng-armv7-quarterly/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/141releng-armv7-quarterly/09/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=141releng-armv7-quarterly SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/141releng-armv7-quarterly/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- thierry@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/math/R-cran-XLConnect/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/R-cran-XLConnect/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/R-cran-XLConnect/work/.cache HOME=/wrkdirs/usr/ports/math/R-cran-XLConnect/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/R-cran-XLConnect/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/R-cran-XLConnect/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/math/R-cran-XLConnect/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/R-cran-XLConnect/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/R-cran-XLConnect/work/.cache HOME=/wrkdirs/usr/ports/math/R-cran-XLConnect/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/R-cran-XLConnect/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/R-cran-XLConnect/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" B SD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_MOD_DIR=lib/R/library/XLConnect JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=14.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/XLConnect" EXAMPLESDIR="share/examples/XLConnect" DATADIR="share/XLConnect" WWWDIR="www/XLConnect" ETCDIR="etc/XLConnect" --End PLIST_SUB-- --SUB_LIST-- JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/XLConnect DOCSDIR=/usr/local/share/doc/XLConnect EXAMPLESDIR=/usr/local/share/examples/XLConnect WWWDIR=/usr/local/www/XLConnect ETCDIR=/usr/local/etc/XLConnect --End SUB_LIST-- ---Begin make.conf--- # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv3 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> R-cran-XLConnect-1.1.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.21.3.pkg [141releng-armv7-quarterly-job-09] Installing pkg-1.21.3... [141releng-armv7-quarterly-job-09] Extracting pkg-1.21.3: .......... done ===> R-cran-XLConnect-1.1.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-cran-XLConnect-1.1.0 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by R-cran-XLConnect-1.1.0 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by R-cran-XLConnect-1.1.0 for building => SHA256 Checksum OK for XLConnect_1.1.0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv3 accepted by the user ===> Fetching all distfiles required by R-cran-XLConnect-1.1.0 for building ===> Extracting for R-cran-XLConnect-1.1.0 => SHA256 Checksum OK for XLConnect_1.1.0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for R-cran-XLConnect-1.1.0 ===> Applying FreeBSD patches for R-cran-XLConnect-1.1.0 from /usr/ports/math/R-cran-XLConnect/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> R-cran-XLConnect-1.1.0 depends on package: R-cran-rJava>0 - not found ===> Installing existing package /packages/All/R-cran-rJava-1.0.11.pkg [141releng-armv7-quarterly-job-09] Installing R-cran-rJava-1.0.11... [141releng-armv7-quarterly-job-09] `-- Installing R-4.4.2... [141releng-armv7-quarterly-job-09] | `-- Installing cairo-1.17.4_2,3... [141releng-armv7-quarterly-job-09] | | `-- Installing fontconfig-2.15.0_3,1... [141releng-armv7-quarterly-job-09] | | `-- Installing expat-2.6.4... [141releng-armv7-quarterly-job-09] | | `-- Extracting expat-2.6.4: .......... done [141releng-armv7-quarterly-job-09] | | `-- Installing freetype2-2.13.3... [141releng-armv7-quarterly-job-09] | | | `-- Installing brotli-1.1.0,1... [141releng-armv7-quarterly-job-09] | | | `-- Extracting brotli-1.1.0,1: .......... done [141releng-armv7-quarterly-job-09] | | | `-- Installing png-1.6.44... [141releng-armv7-quarterly-job-09] | | | `-- Extracting png-1.6.44: .......... done [141releng-armv7-quarterly-job-09] | | `-- Extracting freetype2-2.13.3: .......... done [141releng-armv7-quarterly-job-09] | | `-- Extracting fontconfig-2.15.0_3,1: .......... done [141releng-armv7-quarterly-job-09] | | `-- Installing gettext-runtime-0.23... [141releng-armv7-quarterly-job-09] | | `-- Installing indexinfo-0.3.1... [141releng-armv7-quarterly-job-09] | | `-- Extracting indexinfo-0.3.1: .... done [141releng-armv7-quarterly-job-09] | | `-- Extracting gettext-runtime-0.23: .......... done <snip> want to use this script you need to install print/tex-dvipsk. ===== Message from dejavu-2.37_3: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===== Message from libinotify-20240724: -- You might want to consider increasing the kern.maxfiles tunable if you plan to use this library for applications that need to monitor activity of a lot of files. ===== Message from openjdk8-8.432.06.1: -- This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and procfs(5) mounted on /proc. If you have not done it yet, please do the following: mount -t fdescfs fdesc /dev/fd mount -t procfs proc /proc To make it permanent, you need the following lines in /etc/fstab: fdesc /dev/fd fdescfs rw 0 0 proc /proc procfs rw 0 0 ===> R-cran-XLConnect-1.1.0 depends on package: R-cran-rJava>0 - found ===> Returning to build of R-cran-XLConnect-1.1.0 ===> R-cran-XLConnect-1.1.0 depends on file: /usr/local/bin/R - found =========================================================================== =======================<phase: lib-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: configure >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for R-cran-XLConnect-1.1.0 =========================================================================== =======================<phase: build >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 =========================================================================== =======================<phase: run-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> R-cran-XLConnect-1.1.0 depends on package: R-cran-rJava>0 - found ===> R-cran-XLConnect-1.1.0 depends on package: apache-poi>0 - not found ===> Installing existing package /packages/All/apache-poi-5.3.0.pkg [141releng-armv7-quarterly-job-09] Installing apache-poi-5.3.0... [141releng-armv7-quarterly-job-09] `-- Installing SparseBitSet-1.3... [141releng-armv7-quarterly-job-09] `-- Extracting SparseBitSet-1.3: .... done [141releng-armv7-quarterly-job-09] `-- Installing apache-commons-codec-1.16.0... [141releng-armv7-quarterly-job-09] `-- Extracting apache-commons-codec-1.16.0: .......... done [141releng-armv7-quarterly-job-09] `-- Installing apache-commons-collections4-4.5.0.m2... [141releng-armv7-quarterly-job-09] `-- Extracting apache-commons-collections4-4.5.0.m2: .......... done [141releng-armv7-quarterly-job-09] `-- Installing apache-commons-compress-1.26.2... [141releng-armv7-quarterly-job-09] `-- Extracting apache-commons-compress-1.26.2: .......... done [141releng-armv7-quarterly-job-09] `-- Installing apache-commons-io-2.16.1... [141releng-armv7-quarterly-job-09] `-- Extracting apache-commons-io-2.16.1: .......... done [141releng-armv7-quarterly-job-09] `-- Installing apache-commons-math-3.6.1_3... [141releng-armv7-quarterly-job-09] `-- Extracting apache-commons-math-3.6.1_3: ........ done [141releng-armv7-quarterly-job-09] `-- Installing apache-log4j2-2.24.3... [141releng-armv7-quarterly-job-09] `-- Extracting apache-log4j2-2.24.3: .......... done [141releng-armv7-quarterly-job-09] Extracting apache-poi-5.3.0: .......... done ===== Message from apache-commons-io-2.16.1: -- ===> NOTICE: The apache-commons-io port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from apache-poi-5.3.0: -- ===> NOTICE: The apache-poi port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> R-cran-XLConnect-1.1.0 depends on package: apache-poi>0 - found ===> Returning to build of R-cran-XLConnect-1.1.0 ===> R-cran-XLConnect-1.1.0 depends on package: SparseBitSet>0 - found ===> R-cran-XLConnect-1.1.0 depends on package: apache-xmlbeans>0 - not found ===> Installing existing package /packages/All/apache-xmlbeans-5.2.1.pkg [141releng-armv7-quarterly-job-09] Installing apache-xmlbeans-5.2.1... [141releng-armv7-quarterly-job-09] `-- Installing openjdk11-11.0.25+9.1... [141releng-armv7-quarterly-job-09] | `-- Installing libXrandr-1.5.4... [141releng-armv7-quarterly-job-09] | `-- Extracting libXrandr-1.5.4: .......... done [141releng-armv7-quarterly-job-09] | `-- Installing xorg-fonts-truetype-7.7_1... [141releng-armv7-quarterly-job-09] | | `-- Installing encodings-1.1.0,1... [141releng-armv7-quarterly-job-09] | | `-- Extracting encodings-1.1.0,1: .......... done [141releng-armv7-quarterly-job-09] | | `-- Installing font-bh-ttf-1.0.3_5... [141releng-armv7-quarterly-job-09] | | `-- Extracting font-bh-ttf-1.0.3_5: .......... done [141releng-armv7-quarterly-job-09] | | `-- Installing font-misc-ethiopic-1.0.4... [141releng-armv7-quarterly-job-09] | | `-- Extracting font-misc-ethiopic-1.0.4: ...... done [141releng-armv7-quarterly-job-09] | | `-- Installing font-misc-meltho-1.0.3_5... [141releng-armv7-quarterly-job-09] | | `-- Extracting font-misc-meltho-1.0.3_5: .......... done [141releng-armv7-quarterly-job-09] | `-- Extracting xorg-fonts-truetype-7.7_1: ... done [141releng-armv7-quarterly-job-09] `-- Extracting openjdk11-11.0.25+9.1: .......... done [141releng-armv7-quarterly-job-09] `-- Installing saxon-he-12.5... [141releng-armv7-quarterly-job-09] `-- Extracting saxon-he-12.5: ......... done [141releng-armv7-quarterly-job-09] `-- Installing slf4j-1.7.21... [141releng-armv7-quarterly-job-09] `-- Extracting slf4j-1.7.21: .......... done [141releng-armv7-quarterly-job-09] Extracting apache-xmlbeans-5.2.1: .......... done ==> Running trigger: fontconfig.ucl Running fc-cache to build fontconfig cache... ===== Message from openjdk11-11.0.25+9.1: -- This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and procfs(5) mounted on /proc. If you have not done it yet, please do the following: mount -t fdescfs fdesc /dev/fd mount -t procfs proc /proc To make it permanent, you need the following lines in /etc/fstab: fdesc /dev/fd fdescfs rw 0 0 proc /proc procfs rw 0 0 ===== Message from apache-xmlbeans-5.2.1: -- To use XMLBeans you might have to define the following variables: export XMLBEANS_HOME=/usr/local/share/java/classes export CLASSPATH=/usr/local/share/java/classes/xmlbeans.jar:$CLASSPATH ===> R-cran-XLConnect-1.1.0 depends on package: apache-xmlbeans>0 - found ===> Returning to build of R-cran-XLConnect-1.1.0 ===> R-cran-XLConnect-1.1.0 depends on package: apache-commons-io>0 - found ===> R-cran-XLConnect-1.1.0 depends on package: apache-commons-math>0 - found ===> R-cran-XLConnect-1.1.0 depends on package: apache-commons-codec>0 - found ===> R-cran-XLConnect-1.1.0 depends on package: apache-commons-lang3>0 - not found ===> Installing existing package /packages/All/apache-commons-lang3-3.17.0.pkg [141releng-armv7-quarterly-job-09] Installing apache-commons-lang3-3.17.0... [141releng-armv7-quarterly-job-09] Extracting apache-commons-lang3-3.17.0: .......... done ===> R-cran-XLConnect-1.1.0 depends on package: apache-commons-lang3>0 - found ===> Returning to build of R-cran-XLConnect-1.1.0 ===> R-cran-XLConnect-1.1.0 depends on package: apache-commons-compress>0 - found ===> R-cran-XLConnect-1.1.0 depends on package: apache-commons-collections4>0 - found ===> R-cran-XLConnect-1.1.0 depends on file: /usr/local/bin/R - found ===> R-cran-XLConnect-1.1.0 depends on file: /usr/local/openjdk8/bin/java - found =========================================================================== =======================<phase: stage >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for R-cran-XLConnect-1.1.0 ===> Generating temporary packing list * installing *source* package 'XLConnect' ... file 'R/onLoad.R' has the wrong MD5 checksum ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** tests ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path Warning in file(con, "rb") : cannot open file '/tmp/RtmpYWZCbL/file35123998ca62': No such file or directory Error in file(con, "rb") : cannot open the connection * removing '/wrkdirs/usr/ports/math/R-cran-XLConnect/work/stage/usr/local/lib/R/library/XLConnect' *** Error code 1 Stop. make: stopped in /usr/ports/math/R-cran-XLConnect