[package - main-amd64-default][biology/bifrost] Failed for bifrost-1.3.5 in build
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Date: Fri, 01 Nov 2024 02:33:43 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: jwb@FreeBSD.org Log URL: https://pkg-status.freebsd.org/beefy18/data/main-amd64-default/p35e33b5b9186_sd0f9b0bd19b/logs/bifrost-1.3.5.log Build URL: https://pkg-status.freebsd.org/beefy18/build.html?mastername=main-amd64-default&build=p35e33b5b9186_sd0f9b0bd19b Log: =>> Building biology/bifrost build started at Fri Nov 1 02:33:26 UTC 2024 port directory: /usr/ports/biology/bifrost package name: bifrost-1.3.5 building for: FreeBSD main-amd64-default-job-05 15.0-CURRENT FreeBSD 15.0-CURRENT 1500026 amd64 maintained by: jwb@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 512 Mar 21 2024 /usr/ports/biology/bifrost/Makefile Ports top last git commit: 35e33b5b918 Ports top unclean checkout: no Port dir last git commit: 719334cd852 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2 Host OSVERSION: 1500023 Jail OSVERSION: 1500026 Job Id: 05 !!! Jail is newer than host. (Jail: 1500026, Host: 1500023) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh OSVERSION=1500026 UNAME_v=FreeBSD 15.0-CURRENT 1500026 UNAME_r=15.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2 MASTERMNT=/usr/local/poudriere/data/.m/main-amd64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/main-amd64-default/05/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=main-amd64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- jwb@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/bifrost/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/bifrost/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/bifrost/work/.cache HOME=/wrkdirs/usr/ports/biology/bifrost/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/bifrost/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/bifrost/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/biology/bifrost/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/bifrost/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/bifrost/work/.cache HOME=/wrkdirs/usr/ports/biology/bifrost/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/bifrost/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/bifrost/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/biology/bifrost/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0 644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/bifrost" EXAMPLESDIR="share/examples/bifrost" DATADIR="share/bifrost" WWWDIR="www/bifrost" ETCDIR="etc/bifrost" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/bifrost DOCSDIR=/usr/local/share/doc/bifrost EXAMPLESDIR=/usr/local/share/examples/bifrost WWWDIR=/usr/local/www/bifrost ETCDIR=/usr/local/etc/bifrost --End SUB_LIST-- ---Begin make.conf--- # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- ulimit: can't get limit: Invalid argument cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD2CLAUSE accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> bifrost-1.3.5 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.21.3.pkg [main-amd64-default-job-05] Installing pkg-1.21.3... [main-amd64-default-job-05] Extracting pkg-1.21.3: .......... done ===> bifrost-1.3.5 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of bifrost-1.3.5 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by bifrost-1.3.5 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by bifrost-1.3.5 for building => SHA256 Checksum OK for pmelsted-bifrost-v1.3.5_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by bifrost-1.3.5 for building ===> Extracting for bifrost-1.3.5 => SHA256 Checksum OK for pmelsted-bifrost-v1.3.5_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for bifrost-1.3.5 ===> Applying FreeBSD patches for bifrost-1.3.5 from /usr/ports/biology/bifrost/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> bifrost-1.3.5 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.30.5.pkg [main-amd64-default-job-05] Installing cmake-core-3.30.5... [main-amd64-default-job-05] `-- Installing expat-2.6.3... [main-amd64-default-job-05] `-- Extracting expat-2.6.3: .......... done [main-amd64-default-job-05] `-- Installing jsoncpp-1.9.6_1... [main-amd64-default-job-05] `-- Extracting jsoncpp-1.9.6_1: .......... done [main-amd64-default-job-05] `-- Installing libuv-1.49.1... <snip> /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:2008:40: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 2008 | unitig = new Unitig<U>(move(cs), move(cc)); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:324:34: note: in instantiation of member function 'CompactedDBG<>::readGraphFromIndexFASTA' requested here 324 | p_readSuccess_checksum = readGraphFromIndexFASTA(input_graph_fn, input_index_fn, k_, g_); | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:687:42: note: in instantiation of member function 'CompactedDBG<>::read' requested here 687 | else success = cdbg1.read(lopt.filename_graph_in, lopt.filename_index_in, lopt.nb_threads, lopt.verbose); | ^ In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:1: In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/CompactedDBG.hpp:902: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:2008:50: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 2008 | unitig = new Unitig<U>(move(cs), move(cc)); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:2119:41: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 2119 | unitig = new Unitig<U>(move(cs), move(cc)); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:377:34: note: in instantiation of member function 'CompactedDBG<>::readGraphFromIndexGFA' requested here 377 | p_readSuccess_checksum = readGraphFromIndexGFA(input_graph_fn, input_index_fn, k_, g_); | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:687:42: note: in instantiation of member function 'CompactedDBG<>::read' requested here 687 | else success = cdbg1.read(lopt.filename_graph_in, lopt.filename_index_in, lopt.nb_threads, lopt.verbose); | ^ In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:1: In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/CompactedDBG.hpp:902: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:2119:51: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 2119 | unitig = new Unitig<U>(move(cs), move(cc)); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:1274:40: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 1274 | unitig = new Unitig<U>(move(cs), move(cc)); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:1198:12: note: in instantiation of member function 'CompactedDBG<>::readBinaryGraph' requested here 1198 | return readBinaryGraph(in); | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:382:31: note: in instantiation of member function 'CompactedDBG<>::readBinaryGraph' requested here 382 | p_readSuccess_checksum = readBinaryGraph(input_graph_fn); | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:687:42: note: in instantiation of member function 'CompactedDBG<>::read' requested here 687 | else success = cdbg1.read(lopt.filename_graph_in, lopt.filename_index_in, lopt.nb_threads, lopt.verbose); | ^ In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:1: In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/CompactedDBG.hpp:902: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/IO.tcc:1274:50: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 1274 | unitig = new Unitig<U>(move(cs), move(cc)); | ^ | std:: In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:2: In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.hpp:516: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.tcc:2783:62: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 2783 | buffer_seq.push_back(move(s)); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.tcc:2754:24: note: while substituting into a lambda expression here 2754 | [&]{ | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.tcc:1600:28: note: in instantiation of member function 'ColoredCDBG<>::search' requested here 1600 | const bool ret = this->search(query_filenames, out, found_km_ratio_out, inexact_search, files_as_queries, nb_threads, verbose); | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:731:45: note: in instantiation of member function 'ColoredCDBG<>::search' requested here 731 | success = ccdbg.search( opt.filename_query_in, opt.prefixFilenameOut, opt.get_ratio_found_km, | ^ In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:2: In file included from /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.hpp:516: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.tcc:2155:62: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 2155 | buffer_seq.push_back(move(s)); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.tcc:2126:24: note: while substituting into a lambda expression here 2126 | [&]{ | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.tcc:1613:12: note: in instantiation of member function 'ColoredCDBG<>::searchMinRatioKmer_' requested here 1613 | return searchMinRatioKmer_( query_filenames, out, min_ratio_kmers, 0, | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/ColoredCDBG.tcc:1526:28: note: in instantiation of member function 'ColoredCDBG<>::searchMinRatioKmer' requested here 1526 | const bool ret = this->searchMinRatioKmer(query_filenames, out, min_ratio_kmers, inexact_search, files_as_queries, nb_threads, verbose); | ^ /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/Bifrost.cpp:736:45: note: in instantiation of member function 'ColoredCDBG<>::searchMinRatioKmer' requested here 736 | success = ccdbg.searchMinRatioKmer( opt.filename_query_in, opt.prefixFilenameOut, opt.min_ratio_kmers_search, | ^ 67 warnings and 1 error generated. [ 21% 8/32] /usr/bin/c++ -DMAX_GMER_SIZE=32 -DMAX_KMER_SIZE=32 -I/wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -std=c++11 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -MD -MT src/CMakeFiles/bifrost_static.dir/FASTX_Parser.cpp.o -MF src/CMakeFiles/bifrost_static.dir/FASTX_Parser.cpp.o.d -o src/CMakeFiles/bifrost_static.dir/FASTX_Parser.cpp.o -c /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/FASTX_Parser.cpp [ 25% 8/32] /usr/bin/c++ -DMAX_GMER_SIZE=32 -DMAX_KMER_SIZE=32 -I/wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -std=c++11 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -MD -MT src/CMakeFiles/bifrost_static.dir/GFA_Parser.cpp.o -MF src/CMakeFiles/bifrost_static.dir/GFA_Parser.cpp.o.d -o src/CMakeFiles/bifrost_static.dir/GFA_Parser.cpp.o -c /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:17:61: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 17 | GFA_Parser::GFA_Parser(GFA_Parser&& o) : graph_filenames(move(o.graph_filenames)), | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:18:55: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 18 | graph_out(move(o.graph_out)), graph_in(move(o.graph_in)), | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:18:84: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 18 | graph_out(move(o.graph_out)), graph_in(move(o.graph_in)), | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:34:20: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 34 | graph_in = move(o.graph_in); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:35:21: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 35 | graph_out = move(o.graph_out); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:317:28: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 317 | s.id = move(line_fields[0]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:318:29: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 318 | s.seq = move(line_fields[1]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:320:82: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 320 | for (size_t i = 2; i < line_fields_sz; ++i) s.tags.push_back(move(line_fields[i])); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:330:28: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 330 | s.id = move(line_fields[0]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:332:29: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 332 | s.seq = move(line_fields[2]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:334:82: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 334 | for (size_t i = 3; i < line_fields_sz; ++i) s.tags.push_back(move(line_fields[i])); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:366:32: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 366 | e.vertexA_id = move(line_fields[0]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:367:32: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 367 | e.vertexB_id = move(line_fields[2]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:421:37: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 421 | else e.vertexA_id = move(line_fields[1]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:431:37: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 431 | else e.vertexB_id = move(line_fields[4]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:514:28: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 514 | s.id = move(line_fields[0]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:515:29: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 515 | s.seq = move(line_fields[1]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:517:82: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 517 | for (size_t i = 2; i < line_fields_sz; ++i) s.tags.push_back(move(line_fields[i])); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:527:28: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 527 | s.id = move(line_fields[0]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:529:29: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 529 | s.seq = move(line_fields[2]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:531:82: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 531 | for (size_t i = 3; i < line_fields_sz; ++i) s.tags.push_back(move(line_fields[i])); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:565:36: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 565 | e.vertexA_id = move(line_fields[0]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:566:36: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 566 | e.vertexB_id = move(line_fields[2]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:613:33: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 613 | e.edge_id = move(line_fields[0]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:620:41: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 620 | else e.vertexA_id = move(line_fields[1]); | ^ | std:: /wrkdirs/usr/ports/biology/bifrost/work/bifrost-1.3.5/src/GFA_Parser.cpp:630:41: warning: unqualified call to 'std::move' [-Wunqualified-std-cast-call] 630 | else e.vertexB_id = move(line_fields[4]); | ^ | std:: 26 warnings generated. ninja: build stopped: subcommand failed. ===> Compilation failed unexpectedly. Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to the maintainer. *** Error code 1 Stop. make: stopped making "build" in /usr/ports/biology/bifrost