From nobody Tue May 28 15:46:27 2024 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4VpcLq6cmqz5MbLH for ; Tue, 28 May 2024 15:46:27 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4VpcLq3VmJz47xM for ; Tue, 28 May 2024 15:46:27 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1716911187; a=rsa-sha256; cv=none; b=KyYYN1ArOTmLsEVeS7q9Qz/EELIC2ZPdVl4NHxm1XNvnTfFY2OJbPk1Ry5+79k3zyO58GP Mz3+MsM7jcFsCzq+dTL/Eu25kSI33okbBs64bYgpOmMhnbI/M7LFFqWh1tPZDN04PeLquC 5aiIt4mhU9ovw0abxEJ6BLAJ2ytey704qryZeIrc+9WLjCR9QZr0n1GwHIjTJ/wWWftmli fVVTjxYAug5GwGCoNkhkyYjezU2UHav1RExMlqbaMdyvsWHsePq7bRu1KaXwYJ7i1kN7Ai /2NdXd5laxRHE13jNKjOKrnKxiNbhE2679guTHBZsF1ezqkW0dgAIQlQXIWjZA== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1716911187; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:cc; bh=SvSa9xZEwoEw/oICNGOOeT74wijWAa/F+GloiCxhZRw=; b=P/s3XpHbtQ2gcD8uZPrBI8toJZgjkyO8jsuz2+5AiuYfCvbbmTBen4lHpnhEv1UiI1D6Rq 5Ygik1l9u0X945P/gqtebKwCX5KiopvbPB3R72Y+vijWHRWrTWa56KvZUyn+3LOuYzNmyr sqMU2LGloImqBzafc+cCRB4KoXqPpUwEHS/HGT7MkjCX4Aabt+d2rluYyUtJ9x3VIpEpei hWNKtVvMzBnK9QbfepHPGJL5dRPN4V7DdMe4QCvETj+Xh+8PtJdAy+1RcVfIVYh78neE0U pIJ7t/amj3GxDHLL3Z9UGVNunfT9DhSbs72QHuIuVS/cBA/lrkunsXRXkwI61Q== Received: from beefy16.nyi.freebsd.org (beefy16.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:1f]) by mxrelay.nyi.freebsd.org (Postfix) with ESMTP id 4VpcLq2zf1zJl6 for ; Tue, 28 May 2024 15:46:27 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from root (uid 0) (envelope-from pkg-fallout@FreeBSD.org) id 2950 by beefy16.nyi.freebsd.org (DragonFly Mail Agent v0.13+ on beefy16.nyi.freebsd.org); Tue, 28 May 2024 15:46:27 +0000 To: sunpoet@FreeBSD.org Subject: [package - 132amd64-default][science/cdo] Failed for cdo-2.4.0_1 in build Cc: pkg-fallout@FreeBSD.org Date: Tue, 28 May 2024 15:46:27 +0000 Message-Id: <6655fc53.2950.45377003@beefy16.nyi.freebsd.org> From: List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@FreeBSD.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: sunpoet@FreeBSD.org Log URL: https://pkg-status.freebsd.org/beefy16/data/132amd64-default/b6f9255af153/logs/cdo-2.4.0_1.log Build URL: https://pkg-status.freebsd.org/beefy16/build.html?mastername=132amd64-default&build=b6f9255af153 Log: =>> Building science/cdo build started at Tue May 28 15:42:33 UTC 2024 port directory: /usr/ports/science/cdo package name: cdo-2.4.0_1 building for: FreeBSD 132amd64-default-job-07 13.2-RELEASE-p11 FreeBSD 13.2-RELEASE-p11 amd64 maintained by: sunpoet@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 2473 Apr 16 01:04 /usr/ports/science/cdo/Makefile Ports top last git commit: b6f9255af15 Ports top unclean checkout: no Port dir last git commit: e3ecaf6c0a8 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.1-30-g79e3edcd Host OSVERSION: 1500018 Jail OSVERSION: 1302001 Job Id: 07 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1302001 UNAME_v=FreeBSD 13.2-RELEASE-p11 UNAME_r=13.2-RELEASE-p11 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.1-30-g79e3edcd MASTERMNT=/usr/local/poudriere/data/.m/132amd64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/132amd64-default/07/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=132amd64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/132amd64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.1-30-g79e3edcd SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for cdo-2.4.0_1: CGRIBEX=on: Use CGRIBEX library for GRIB1 files ECCODES=on: Use ecCodes for GRIB files HDF5=on: HDF-5 data format support JASPER=on: JPEG 2000 support via JasPer NETCDF=on: NetCDF data format support PROJ=on: PROJ.4 cartographic projections support SZIP=on: Szip compression support UDUNITS=on: Unidata units library (udunits) support UUID=on: UUID support ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- sunpoet@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --disable-data --disable-extra --disable-fortran --disable-ieg --disable-openmp --disable-service --enable-cdi-lib --program-transform-name="" --with-zlib=/usr --with-cgribex --with-eccodes --with-hdf5 --with-jasper --with-netcdf --with-proj --with-szlib --with-udunits2 --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON=/usr/local/bin/python3.9 MAKE=gmake PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/cdo/work/.cache HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cdo/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/cdo/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/science/cdo/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cdo/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/cdo/work/.cache HOME=/wrkdirs/usr/ports/science/cdo/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cdo/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/cdo/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CGRIBEX="" NO_CGRIBEX="@comment " ECCODES="" NO_ECCODES="@comment " HDF5="" NO_HDF5="@comment " JASPER="" NO_JASPER="@comment " NETCDF="" NO_NETCDF="@comment " PROJ="" NO_PROJ="@comment " SZIP="" NO_SZIP="@comment " UDUNITS="" NO_UDUNITS="@comment " UUID="" NO_UUID="@comment " PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=13.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/cdo" EXAMPLESDIR="share/examples/cdo" DATADIR="share/cdo" WWWDIR="www/cdo" ETCDIR="etc/cdo" --End PLIST_SUB-- --SUB_LIST-- CGRIBEX="" NO_CGRIBEX="@comment " ECCODES="" NO_ECCODES="@comment " HDF5="" NO_HDF5="@comment " JASPER="" NO_JASPER="@comment " NETCDF="" NO_NETCDF="@comment " PROJ="" NO_PROJ="@comment " SZIP="" NO_SZIP="@comment " UDUNITS="" NO_UDUNITS="@comment " UUID="" NO_UUID="@comment " PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/cdo DOCSDIR=/usr/local/share/doc/cdo EXAMPLESDIR=/usr/local/share/examples/cdo WWWDIR=/usr/local/www/cdo ETCDIR=/usr/local/etc/cdo --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> cdo-2.4.0_1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.21.3.pkg [132amd64-default-job-07] Installing pkg-1.21.3... [132amd64-default-job-07] Extracting pkg-1.21.3: .......... done ===> cdo-2.4.0_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of cdo-2.4.0_1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by cdo-2.4.0_1 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by cdo-2.4.0_1 for building => SHA256 Checksum OK for cdo-2.4.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by cdo-2.4.0_1 for building ===> Extracting for cdo-2.4.0_1 => SHA256 Checksum OK for cdo-2.4.0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for cdo-2.4.0_1 ===> Applying FreeBSD patches for cdo-2.4.0_1 from /usr/ports/science/cdo/files =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> cdo-2.4.0_1 depends on package: gmake>=4.4.1 - not found ===> Installing existing package /packages/All/gmake-4.4.1.pkg [132amd64-default-job-07] Installing gmake-4.4.1... [132amd64-default-job-07] `-- Installing gettext-runtime-0.22.5... [132amd64-default-job-07] | `-- Installing indexinfo-0.3.1... [132amd64-default-job-07] | `-- Extracting indexinfo-0.3.1: .... done [132amd64-default-job-07] `-- Extracting gettext-runtime-0.22.5: .......... done [132amd64-default-job-07] Extracting gmake-4.4.1: .......... done ===> cdo-2.4.0_1 depends on package: gmake>=4.4.1 - found ===> Returning to build of cdo-2.4.0_1 ===> cdo-2.4.0_1 depends on file: /usr/local/bin/python3.9 - not found ===> Installing existing package /packages/All/python39-3.9.19.pkg [132amd64-default-job-07] Installing python39-3.9.19... [132amd64-default-job-07] `-- Installing libffi-3.4.6... [132amd64-default-job-07] `-- Extracting libffi-3.4.6: .......... done libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT mathutil.lo -MD -MP -MF .deps/mathutil.Tpo -c mathutil.c -fPIC -DPIC -o .libs/mathutil.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT mathutil.lo -MD -MP -MF .deps/mathutil.Tpo -c mathutil.c -o mathutil.o >/dev/null 2>&1 depbase=`echo permutedsort.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT permutedsort.lo -MD -MP -MF $depbase.Tpo -c -o permutedsort.lo permutedsort.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT permutedsort.lo -MD -MP -MF .deps/permutedsort.Tpo -c permutedsort.c -fPIC -DPIC -o .libs/permutedsort.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT permutedsort.lo -MD -MP -MF .deps/permutedsort.Tpo -c permutedsort.c -o permutedsort.o >/dev/null 2>&1 depbase=`echo qsort_reentrant.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT qsort_reentrant.lo -MD -MP -MF $depbase.Tpo -c -o qsort_reentrant.lo qsort_reentrant.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT qsort_reentrant.lo -MD -MP -MF .deps/qsort_reentrant.Tpo -c qsort_reentrant.c -fPIC -DPIC -o .libs/qsort_reentrant.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT qsort_reentrant.lo -MD -MP -MF .deps/qsort_reentrant.Tpo -c qsort_reentrant.c -o qsort_reentrant.o >/dev/null 2>&1 depbase=`echo starutil.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT starutil.lo -MD -MP -MF $depbase.Tpo -c -o starutil.lo starutil.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT starutil.lo -MD -MP -MF .deps/starutil.Tpo -c starutil.c -fPIC -DPIC -o .libs/starutil.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT starutil.lo -MD -MP -MF .deps/starutil.Tpo -c starutil.c -o starutil.o >/dev/null 2>&1 depbase=`echo interpolation.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ /bin/sh ../../../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT interpolation.lo -MD -MP -MF $depbase.Tpo -c -o interpolation.lo interpolation.c &&\ mv -f $depbase.Tpo $depbase.Plo libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT interpolation.lo -MD -MP -MF .deps/interpolation.Tpo -c interpolation.c -fPIC -DPIC -o .libs/interpolation.o libtool: compile: cc -DHAVE_CONFIG_H -I. -I../../../src -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -MT interpolation.lo -MD -MP -MF .deps/interpolation.Tpo -c interpolation.c -o interpolation.o >/dev/null 2>&1 /bin/sh ../../../libtool --tag=CC --mode=link cc -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -pthread -pthread -fstack-protector-strong -o libhealpix.la bl.lo healpix-utils.lo healpix.lo mathutil.lo permutedsort.lo qsort_reentrant.lo starutil.lo interpolation.lo -leccodes -lnetcdf -lsz -lpthread -lproj -leccodes -ludunits2 -lnetcdf -lhdf5_hl -lhdf5 -lsz -lpthread -L/usr/local/lib libtool: link: ar cr .libs/libhealpix.a .libs/bl.o .libs/healpix-utils.o .libs/healpix.o .libs/mathutil.o .libs/permutedsort.o .libs/qsort_reentrant.o .libs/starutil.o .libs/interpolation.o libtool: link: ranlib .libs/libhealpix.a libtool: link: ( cd ".libs" && rm -f "libhealpix.la" && ln -s "../libhealpix.la" "libhealpix.la" ) gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/cdo/work/cdo-2.4.0/src/lib/healpix' Making all in src gmake[1]: Entering directory '/wrkdirs/usr/ports/science/cdo/work/cdo-2.4.0/src' gmake all-am gmake[2]: Entering directory '/wrkdirs/usr/ports/science/cdo/work/cdo-2.4.0/src' c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-cdo.o -MD -MP -MF .deps/cdo-cdo.Tpo -c -o cdo-cdo.o `test -f 'cdo.cc' || echo './'`cdo.cc mv -f .deps/cdo-cdo.Tpo .deps/cdo-cdo.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Adisit.o -MD -MP -MF .deps/cdo-Adisit.Tpo -c -o cdo-Adisit.o `test -f 'Adisit.cc' || echo './'`Adisit.cc mv -f .deps/cdo-Adisit.Tpo .deps/cdo-Adisit.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Afterburner.o -MD -MP -MF .deps/cdo-Afterburner.Tpo -c -o cdo-Afterburner.o `test -f 'Afterburner.cc' || echo './'`Afterburner.cc mv -f .deps/cdo-Afterburner.Tpo .deps/cdo-Afterburner.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Arith.o -MD -MP -MF .deps/cdo-Arith.Tpo -c -o cdo-Arith.o `test -f 'Arith.cc' || echo './'`Arith.cc mv -f .deps/cdo-Arith.Tpo .deps/cdo-Arith.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Arithc.o -MD -MP -MF .deps/cdo-Arithc.Tpo -c -o cdo-Arithc.o `test -f 'Arithc.cc' || echo './'`Arithc.cc mv -f .deps/cdo-Arithc.Tpo .deps/cdo-Arithc.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Arithdays.o -MD -MP -MF .deps/cdo-Arithdays.Tpo -c -o cdo-Arithdays.o `test -f 'Arithdays.cc' || echo './'`Arithdays.cc mv -f .deps/cdo-Arithdays.Tpo .deps/cdo-Arithdays.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Arithlat.o -MD -MP -MF .deps/cdo-Arithlat.Tpo -c -o cdo-Arithlat.o `test -f 'Arithlat.cc' || echo './'`Arithlat.cc mv -f .deps/cdo-Arithlat.Tpo .deps/cdo-Arithlat.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Bitrounding.o -MD -MP -MF .deps/cdo-Bitrounding.Tpo -c -o cdo-Bitrounding.o `test -f 'Bitrounding.cc' || echo './'`Bitrounding.cc mv -f .deps/cdo-Bitrounding.Tpo .deps/cdo-Bitrounding.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Cat.o -MD -MP -MF .deps/cdo-Cat.Tpo -c -o cdo-Cat.o `test -f 'Cat.cc' || echo './'`Cat.cc mv -f .deps/cdo-Cat.Tpo .deps/cdo-Cat.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-CDIread.o -MD -MP -MF .deps/cdo-CDIread.Tpo -c -o cdo-CDIread.o `test -f 'CDIread.cc' || echo './'`CDIread.cc mv -f .deps/cdo-CDIread.Tpo .deps/cdo-CDIread.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-CDItest.o -MD -MP -MF .deps/cdo-CDItest.Tpo -c -o cdo-CDItest.o `test -f 'CDItest.cc' || echo './'`CDItest.cc mv -f .deps/cdo-CDItest.Tpo .deps/cdo-CDItest.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-CDIwrite.o -MD -MP -MF .deps/cdo-CDIwrite.Tpo -c -o cdo-CDIwrite.o `test -f 'CDIwrite.cc' || echo './'`CDIwrite.cc mv -f .deps/cdo-CDIwrite.Tpo .deps/cdo-CDIwrite.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Change.o -MD -MP -MF .deps/cdo-Change.Tpo -c -o cdo-Change.o `test -f 'Change.cc' || echo './'`Change.cc mv -f .deps/cdo-Change.Tpo .deps/cdo-Change.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Change_e5slm.o -MD -MP -MF .deps/cdo-Change_e5slm.Tpo -c -o cdo-Change_e5slm.o `test -f 'Change_e5slm.cc' || echo './'`Change_e5slm.cc mv -f .deps/cdo-Change_e5slm.Tpo .deps/cdo-Change_e5slm.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Cloudlayer.o -MD -MP -MF .deps/cdo-Cloudlayer.Tpo -c -o cdo-Cloudlayer.o `test -f 'Cloudlayer.cc' || echo './'`Cloudlayer.cc mv -f .deps/cdo-Cloudlayer.Tpo .deps/cdo-Cloudlayer.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-CMOR.o -MD -MP -MF .deps/cdo-CMOR.Tpo -c -o cdo-CMOR.o `test -f 'CMOR.cc' || echo './'`CMOR.cc mv -f .deps/cdo-CMOR.Tpo .deps/cdo-CMOR.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-CMOR_lite.o -MD -MP -MF .deps/cdo-CMOR_lite.Tpo -c -o cdo-CMOR_lite.o `test -f 'CMOR_lite.cc' || echo './'`CMOR_lite.cc mv -f .deps/cdo-CMOR_lite.Tpo .deps/cdo-CMOR_lite.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-CMOR_table.o -MD -MP -MF .deps/cdo-CMOR_table.Tpo -c -o cdo-CMOR_table.o `test -f 'CMOR_table.cc' || echo './'`CMOR_table.cc mv -f .deps/cdo-CMOR_table.Tpo .deps/cdo-CMOR_table.Po c++ -DHAVE_CONFIG_H -I. -I../libcdi/src -I../src/mpim_grid -DYAC_FOR_CDO -isystem /usr/local/include -DCDI_SIZE_TYPE=size_t -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++20 -pthread -MT cdo-Collgrid.o -MD -MP -MF .deps/cdo-Collgrid.Tpo -c -o cdo-Collgrid.o `test -f 'Collgrid.cc' || echo './'`Collgrid.cc In file included from Collgrid.cc:11: In file included from ./process_int.h:11: In file included from ./cdo_cdi_wrapper.h:4: In file included from /usr/include/c++/v1/string:525: In file included from /usr/include/c++/v1/algorithm:716: /usr/include/c++/v1/__algorithm/make_heap.h:28:62: error: no type named 'difference_type' in 'std::iterator_traits>' typedef typename iterator_traits<_RandomAccessIterator>::difference_type difference_type; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/v1/__algorithm/partial_sort.h:38:12: note: in instantiation of function template specialization 'std::__make_heap>' requested here _VSTD::__make_heap<_Compare>(__first, __middle, __comp); ^ /usr/include/c++/v1/__algorithm/sort.h:540:12: note: in instantiation of function template specialization 'std::__partial_sort>' requested here _VSTD::__partial_sort<_Comp_ref>(__first, __last, __last, _Comp_ref(__comp)); ^ Collgrid.cc:133:15: note: in instantiation of function template specialization 'std::sort, double xyinfoType::*>' requested here ranges::sort(xyinfo, {}, &xyinfoType::x); ^ In file included from Collgrid.cc:11: In file included from ./process_int.h:11: In file included from ./cdo_cdi_wrapper.h:4: In file included from /usr/include/c++/v1/string:525: In file included from /usr/include/c++/v1/algorithm:716: /usr/include/c++/v1/__algorithm/make_heap.h:29:34: error: invalid operands to binary expression ('std::vector' and 'std::vector') difference_type __n = __last - __first; ~~~~~~ ^ ~~~~~~~ /usr/include/c++/v1/__iterator/wrap_iter.h:245:6: note: candidate template ignored: could not match '__wrap_iter' against 'vector' auto operator-(const __wrap_iter<_Iter1>& __x, const __wrap_iter<_Iter2>& __y) _NOEXCEPT ^ /usr/include/c++/v1/__iterator/move_iterator.h:152:6: note: candidate template ignored: could not match 'move_iterator' against 'vector' auto operator-(const move_iterator<_Iter1>& __x, const move_iterator<_Iter2>& __y) ^ /usr/include/c++/v1/__iterator/reverse_iterator.h:201:1: note: candidate template ignored: could not match 'reverse_iterator' against 'vector' operator-(const reverse_iterator<_Iter1>& __x, const reverse_iterator<_Iter2>& __y) ^ /usr/include/c++/v1/string:582:11: note: candidate template ignored: could not match 'fpos' against 'vector' streamoff operator-(const fpos<_StateT>& __x, const fpos<_StateT>& __y) ^ In file included from Collgrid.cc:11: In file included from ./process_int.h:11: In file included from ./cdo_cdi_wrapper.h:4: In file included from /usr/include/c++/v1/string:525: In file included from /usr/include/c++/v1/algorithm:729: In file included from /usr/include/c++/v1/__algorithm/nth_element.h:14: In file included from /usr/include/c++/v1/__algorithm/sort.h:15: /usr/include/c++/v1/__algorithm/partial_sort.h:39:54: error: no type named 'difference_type' in 'std::iterator_traits>' typename iterator_traits<_RandomAccessIterator>::difference_type __len = __middle - __first; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/v1/__algorithm/sort.h:540:12: note: in instantiation of function template specialization 'std::__partial_sort>' requested here _VSTD::__partial_sort<_Comp_ref>(__first, __last, __last, _Comp_ref(__comp)); ^ Collgrid.cc:133:15: note: in instantiation of function template specialization 'std::sort, double xyinfoType::*>' requested here ranges::sort(xyinfo, {}, &xyinfoType::x); ^ Collgrid.cc:133:7: error: no member named 'sort' in namespace 'std::ranges'; did you mean 'std::sort'? ranges::sort(xyinfo, {}, &xyinfoType::x); ^~~~~~~~~~~~ std::sort /usr/include/c++/v1/__algorithm/sort.h:535:1: note: 'std::sort' declared here sort(_RandomAccessIterator __first, _RandomAccessIterator __last, _Compare __comp) ^ Collgrid.cc:139:15: error: no member named 'sort' in namespace 'std::ranges' ranges::sort(xyinfo, isSouthNorth ? cmpxy_lt : cmpxy_gt); ~~~~~~~~^ In file included from Collgrid.cc:11: In file included from ./process_int.h:11: In file included from ./cdo_cdi_wrapper.h:4: In file included from /usr/include/c++/v1/string:525: In file included from /usr/include/c++/v1/algorithm:667: In file included from /usr/include/c++/v1/functional:493: In file included from /usr/include/c++/v1/__algorithm/search.h:13: /usr/include/c++/v1/__algorithm/comp.h:36:71: error: invalid operands to binary expression ('const xyinfoType' and 'const xyinfoType') bool operator()(const _T1& __x, const _T1& __y) const {return __x == __y;} ~~~ ^ ~~~ /usr/include/c++/v1/__algorithm/equal.h:28:10: note: in instantiation of member function 'std::__equal_to::operator()' requested here if (!__pred(*__first1, *__first2)) ^ /usr/include/c++/v1/__algorithm/equal.h:38:17: note: in instantiation of function template specialization 'std::equal, std::__wrap_iter, std::__equal_to>' requested here return _VSTD::equal(__first1, __last1, __first2, __equal_to<__v1, __v2>()); ^ /usr/include/c++/v1/vector:3220:41: note: in instantiation of function template specialization 'std::equal, std::__wrap_iter>' requested here return __sz == __y.size() && _VSTD::equal(__x.begin(), __x.end(), __y.begin()); ^ /usr/include/c++/v1/__algorithm/partial_sort.h:36:17: note: in instantiation of function template specialization 'std::__1::operator==>' requested here if (__first == __middle) ^ /usr/include/c++/v1/__utility/pair.h:328:1: note: candidate template ignored: could not match 'const pair<_T1, _T2>' against 'const xyinfoType' operator==(const pair<_T1,_T2>& __x, const pair<_T1,_T2>& __y) ^ /usr/include/c++/v1/__iterator/wrap_iter.h:156:6: note: candidate template ignored: could not match 'const __wrap_iter<_Iter1>' against 'const xyinfoType' bool operator==(const __wrap_iter<_Iter1>& __x, const __wrap_iter<_Iter1>& __y) _NOEXCEPT ^ /usr/include/c++/v1/__iterator/wrap_iter.h:163:6: note: candidate template ignored: could not match 'const __wrap_iter<_Iter1>' against 'const xyinfoType' bool operator==(const __wrap_iter<_Iter1>& __x, const __wrap_iter<_Iter2>& __y) _NOEXCEPT ^ /usr/include/c++/v1/__iterator/wrap_iter.h:163:6: note: candidate template ignored: could not match 'const __wrap_iter<_Iter1>' against 'const xyinfoType' In file included from Collgrid.cc:11: In file included from ./process_int.h:11: In file included from ./cdo_cdi_wrapper.h:4: In file included from /usr/include/c++/v1/string:525: In file included from /usr/include/c++/v1/algorithm:729: In file included from /usr/include/c++/v1/__algorithm/nth_element.h:14: /usr/include/c++/v1/__algorithm/sort.h:480:60: error: no type named 'difference_type' in 'std::iterator_traits>' typedef typename iterator_traits<_RandomAccessIterator>::difference_type difference_type; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /usr/include/c++/v1/__algorithm/sort.h:542:12: note: in instantiation of function template specialization 'std::__sort>' requested here _VSTD::__sort<_Comp_ref>(_VSTD::__unwrap_iter(__first), _VSTD::__unwrap_iter(__last), _Comp_ref(__comp)); ^ /usr/include/c++/v1/__algorithm/sort.h:481:54: error: invalid operands to binary expression ('std::vector' and 'std::vector') difference_type __depth_limit = 2 * __log2i(__last - __first); ~~~~~~ ^ ~~~~~~~ /usr/include/c++/v1/__iterator/wrap_iter.h:245:6: note: candidate template ignored: could not match '__wrap_iter' against 'vector' auto operator-(const __wrap_iter<_Iter1>& __x, const __wrap_iter<_Iter2>& __y) _NOEXCEPT ^ /usr/include/c++/v1/__iterator/move_iterator.h:152:6: note: candidate template ignored: could not match 'move_iterator' against 'vector' auto operator-(const move_iterator<_Iter1>& __x, const move_iterator<_Iter2>& __y) ^ /usr/include/c++/v1/__iterator/reverse_iterator.h:201:1: note: candidate template ignored: could not match 'reverse_iterator' against 'vector' operator-(const reverse_iterator<_Iter1>& __x, const reverse_iterator<_Iter2>& __y) ^ /usr/include/c++/v1/string:582:11: note: candidate template ignored: could not match 'fpos' against 'vector' streamoff operator-(const fpos<_StateT>& __x, const fpos<_StateT>& __y) ^ 8 errors generated. gmake[2]: *** [Makefile:2927: cdo-Collgrid.o] Error 1 gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/cdo/work/cdo-2.4.0/src' gmake[1]: *** [Makefile:1032: all] Error 2 gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/cdo/work/cdo-2.4.0/src' gmake: *** [Makefile:508: all-recursive] Error 1 *** Error code 1 Stop. make: stopped in /usr/ports/science/cdo