From nobody Tue May 21 06:31:57 2024 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4Vk4NG08Fcz5LQdn for ; Tue, 21 May 2024 06:31:58 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.chi.freebsd.org (mxrelay.chi.freebsd.org [IPv6:2610:1c0:1040:6064::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature ECDSA (P-256) client-digest SHA256) (Client CN "mxrelay.chi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4Vk4NF5Ggsz4PcB for ; Tue, 21 May 2024 06:31:57 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1716273117; a=rsa-sha256; cv=none; b=bdr3f12YYpZsEIudU3RnDgc0paBuQMOf4Y8C63FxKXD6cVOstEzHNzv8tJScSyEUWAv8zo zTeGgGbt+diI6+x6QZ4IRtoGLD8Lh6gatoOUHX1y8C5uyauuhqcwnFrVpugpZPgSYESk7k m0Gb2gbStirzqIMTg62HY0nNs1rLvgW15x5EMbBM94LW6M0+URo52TCC7kyalkQS4FUCSp bmS1CV+ZQk6Lru8rjS6/DbZkQJpOkA9HqFOxg5aXZCC4COLzRU2AgJAlVHEX39XPX9cSra kore1JCw5rwHxjW/03b2pLaqK0UwLoccyIp+/yKIBwGGD0EjlNUq1tgGmGRzRw== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1716273117; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:cc; bh=itvk5+YPC1z4H3RfI6D81qtD4SjM69DSzPcsDz1admM=; b=Z2TkAPxcUV3UnZZ786/HpQITEKgkNCBf8grfF1eqI1pD3kDzEni8WGjDxkVcIp8HXS3qyw lMOmUUNwbNwKGh7ue55VzY4Zr3sOVaMyrsJZGNHq4hT7R3I2Te8eFqV5F77QSghKjggVE5 9n3eYeh8Whx77VDssWGZq3lIFKLsrLceHY5h9pNXqsJRsnp3Rn+SFhABhMw3fKSwYlqzzy V8SM7k/a5JT+tulnVoVbFFTpeLclLoiwfim+V4vMYTk6lB+1OSoglBcxp8YinnmmAR+Jby gKWWU0jNZwFC9ETTXlu5V5nJv/twI/22fHWJPiSiimKIJ02is8amoAsiQhisVA== Received: from beefy21.chi.freebsd.org (beefy21.chi.freebsd.org [IPv6:2610:1c0:1040:6080::16:15]) by mxrelay.chi.freebsd.org (Postfix) with ESMTP id 7409225BA6 for ; Tue, 21 May 2024 06:31:57 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from root (uid 0) (envelope-from pkg-fallout@FreeBSD.org) id 302 by beefy21.chi.freebsd.org (DragonFly Mail Agent v0.13+ on beefy21.chi.freebsd.org); Tue, 21 May 2024 06:31:57 +0000 To: yuri@FreeBSD.org Subject: [package - 140i386-default][biology/cytoscape] Failed for cytoscape-3.6.1 in build Cc: pkg-fallout@FreeBSD.org Date: Tue, 21 May 2024 06:31:57 +0000 Message-Id: <664c3fdd.302.1fa8922b@beefy21.chi.freebsd.org> From: List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@FreeBSD.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: https://pkg-status.freebsd.org/beefy21/data/140i386-default/a40e2625494e/logs/cytoscape-3.6.1.log Build URL: https://pkg-status.freebsd.org/beefy21/build.html?mastername=140i386-default&build=a40e2625494e Log: =>> Building biology/cytoscape build started at Tue May 21 06:26:15 UTC 2024 port directory: /usr/ports/biology/cytoscape package name: cytoscape-3.6.1 building for: FreeBSD 140i386-default-job-38 14.0-RELEASE-p6 FreeBSD 14.0-RELEASE-p6 i386 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 2461 May 21 01:01 /usr/ports/biology/cytoscape/Makefile Ports top last git commit: a40e26254 Ports top unclean checkout: no Port dir last git commit: a40e26254 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.1-30-g79e3edcd Host OSVERSION: 1500018 Jail OSVERSION: 1400097 Job Id: 38 ---Begin Environment--- SHELL=/bin/sh BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 OSVERSION=1400097 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 UNAME_m=i386 UNAME_p=i386 UNAME_r=14.0-RELEASE-p6 LOCALBASE=/usr/local UNAME_v=FreeBSD 14.0-RELEASE-p6 USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.1-30-g79e3edcd MASTERMNT=/usr/local/poudriere/data/.m/140i386-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/140i386-default/38/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=140i386-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/140i386-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.1-30-g79e3edcd SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/cytoscape/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/cytoscape/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/cytoscape/work/.cache HOME=/wrkdirs/usr/ports/biology/cytoscape/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/cytoscape/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/cytoscape/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/cytoscape/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/cytoscape/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/cytoscape/work/.cache HOME=/wrkdirs/usr/ports/biology/cytoscape/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/cytoscape/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/cytoscape/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/cytoscape" EXAMPLESDIR="share/examples/cytoscape" DATADIR="share/cytoscape" WWWDIR="www/cytoscape" ETCDIR="etc/cytoscape" --End PLIST_SUB-- --SUB_LIST-- JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/cytoscape DOCSDIR=/usr/local/share/doc/cytoscape EXAMPLESDIR=/usr/local/share/examples/cytoscape WWWDIR=/usr/local/www/cytoscape ETCDIR=/usr/local/etc/cytoscape --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License LGPL21 accepted by the user =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> cytoscape-3.6.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.21.2.pkg [140i386-default-job-38] Installing pkg-1.21.2... [140i386-default-job-38] Extracting pkg-1.21.2: .......... done ===> cytoscape-3.6.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of cytoscape-3.6.1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by cytoscape-3.6.1 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by cytoscape-3.6.1 for building => SHA256 Checksum OK for FreeBSD-cytoscape-3.6.1-maven-repository.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-parent-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-api-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-impl-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-support-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-gui-distribution-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-app-template-3.6.1_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License LGPL21 accepted by the user ===> Fetching all distfiles required by cytoscape-3.6.1 for building ===> Extracting for cytoscape-3.6.1 => SHA256 Checksum OK for FreeBSD-cytoscape-3.6.1-maven-repository.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-parent-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-api-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-impl-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-support-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-gui-distribution-3.6.1_GH0.tar.gz. => SHA256 Checksum OK for cytoscape-cytoscape-app-template-3.6.1_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for cytoscape-3.6.1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> cytoscape-3.6.1 depends on package: maven363>0 - not found ===> Installing existing package /packages/All/maven363-3.6.3.pkg [140i386-default-job-38] Installing maven363-3.6.3... [140i386-default-job-38] `-- Installing maven-wrapper-2... [140i386-default-job-38] `-- Extracting maven-wrapper-2: ... done [140i386-default-job-38] `-- Installing openjdk8-8.412.08.1... [140i386-default-job-38] | `-- Installing alsa-lib-1.2.11... [WARNING] The assembly descriptor contains a filesystem-root relative reference, which is not cross platform compatible /framework/etc/ [WARNING] The assembly descriptor contains a filesystem-root relative reference, which is not cross platform compatible /framework/system [WARNING] The assembly descriptor contains a filesystem-root relative reference, which is not cross platform compatible /sampleData [WARNING] The assembly descriptor contains a filesystem-root relative reference, which is not cross platform compatible /sampleData [INFO] Building zip: /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/gui-distribution/assembly/target/cytoscape-windows-3.6.1.zip [INFO] [INFO] ---------------< org.cytoscape.app-developer:cytoscape >---------------- [INFO] Building Distribution 3.6.1 [116/117] [INFO] --------------------------------[ pom ]--------------------------------- [INFO] [INFO] --- maven-dependency-plugin:2.2:unpack (unpack-cytoscape) @ cytoscape --- [INFO] Configured Artifact: org.cytoscape.distribution:cytoscape:3.6.1:tar.gz [INFO] Unpacking /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/gui-distribution/assembly/target/cytoscape-unix-3.6.1.tar.gz to /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/tmp with includes and excludes [INFO] Expanding: /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/gui-distribution/assembly/target/cytoscape-unix-3.6.1.tar.gz into /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/tmp [INFO] [INFO] --- maven-dependency-plugin:2.2:unpack (unpack-javadoc) @ cytoscape --- [INFO] Configured Artifact: org.cytoscape:swing-app-api:javadoc:3.6.1:jar [INFO] Unpacking /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/api/swing-app-api/target/swing-app-api-3.6.1-javadoc.jar to /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/API with includes and excludes [INFO] [INFO] --- maven-dependency-plugin:2.2:copy (copy) @ cytoscape --- [INFO] Configured Artifact: org.cytoscape:swing-app-api:jar-with-dependencies:3.6.1:jar [INFO] Configured Artifact: org.cytoscape:api-parent:sources:3.6.1:jar [INFO] Configured Artifact: org.cytoscape:impl-parent:sources:3.6.1:jar [INFO] Copying swing-app-api-3.6.1-jar-with-dependencies.jar to /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/lib/cytoscape-swing-app-api-3.6.1.jar [INFO] Copying api-parent-3.6.1-sources.jar to /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/lib/api-3.6.1-sources.jar [INFO] Copying impl-parent-3.6.1-sources.jar to /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/lib/impl-3.6.1-sources.jar [INFO] [INFO] --- maven-resources-plugin:2.5:copy-resources (copy-unzipped-dir) @ cytoscape --- [debug] execute contextualize [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 241 resources [INFO] [INFO] --- maven-antrun-plugin:1.6:run (fix-permissions) @ cytoscape --- [WARNING] Parameter tasks is deprecated, use target instead [INFO] Executing tasks main: [INFO] Executed tasks [INFO] [INFO] >>> maven-source-plugin:2.4:jar (attach-sources) > generate-sources @ cytoscape >>> [INFO] [INFO] <<< maven-source-plugin:2.4:jar (attach-sources) < generate-sources @ cytoscape <<< [INFO] [INFO] [INFO] --- maven-source-plugin:2.4:jar (attach-sources) @ cytoscape --- [INFO] [INFO] --- maven-clean-plugin:2.4.1:clean (clean-temporary-directory) @ cytoscape --- [INFO] Deleting /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/tmp (includes = [], excludes = []) [INFO] Deleting /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/dependency-maven-plugin-markers (includes = [], excludes = []) [INFO] Deleting /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/target/antrun (includes = [], excludes = []) [INFO] [INFO] --- maven-install-plugin:2.4:install (default-install) @ cytoscape --- [INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/app-developer/pom.xml to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/app-developer/cytoscape/3.6.1/cytoscape-3.6.1.pom [INFO] [INFO] -----------------------< org.cytoscape:project >------------------------ [INFO] Building Cytoscape Project POM 3.6.1 [117/117] [INFO] --------------------------------[ pom ]--------------------------------- [INFO] [INFO] --- maven-install-plugin:2.4:install (default-install) @ project --- [INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/pom.xml to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/project/3.6.1/project-3.6.1.pom [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for Cytoscape Project POM 3.6.1: [INFO] [INFO] Basic Cytoscape POM Configuration .................. SUCCESS [ 0.226 s] [INFO] Cytoscape API Parent Project POM ................... SUCCESS [ 3.938 s] [INFO] Cytoscape Documentation Taglets .................... SUCCESS [ 0.974 s] [INFO] Cytoscape Event API (event-api) .................... SUCCESS [ 2.359 s] [INFO] Cytoscape Model API (model-api) .................... SUCCESS [ 0.975 s] [INFO] Cytoscape Service API (service-api) ................ SUCCESS [ 0.459 s] [INFO] Cytoscape View Model API (viewmodel-api) ........... SUCCESS [ 0.397 s] [INFO] Cytoscape CI API (ci-api) .......................... SUCCESS [ 0.635 s] [INFO] Cytoscape Work API (work-api) ...................... SUCCESS [ 0.752 s] [INFO] Cytoscape Presentation API (presentation-api) ...... SUCCESS [ 0.815 s] [INFO] Cytoscape Application API (application-api) ........ SUCCESS [ 0.400 s] [INFO] Cytoscape Property API (property-api) .............. SUCCESS [ 0.376 s] [INFO] Cytoscape VizMap API (vizmap-api) .................. SUCCESS [ 0.342 s] [INFO] Cytoscape Session API (session-api) ................ SUCCESS [ 0.482 s] [INFO] Cytoscape Filter API (filter-api) .................. SUCCESS [ 0.438 s] [INFO] Cytoscape IO API (io-api) .......................... SUCCESS [ 0.461 s] [INFO] Cytoscape Core Task API (core-task-api) ............ SUCCESS [ 0.449 s] [INFO] Cytoscape Equations API (equations-api) ............ SUCCESS [ 0.363 s] [INFO] Cytoscape Layout API (layout-api) .................. SUCCESS [ 0.556 s] [INFO] Cytoscape Groups API (group-api) ................... SUCCESS [ 0.558 s] [INFO] Cytoscape Groups API (jobs-api) .................... SUCCESS [ 0.410 s] [INFO] Cytoscape Webservice API (webservice-api) .......... SUCCESS [ 0.394 s] [INFO] Cytoscape Data Source API (datasource-api) ......... SUCCESS [ 0.367 s] [INFO] Cytoscape Command Executor API (command-executor-api) SUCCESS [ 0.270 s] [INFO] Cytoscape App API (app-api) ........................ SUCCESS [ 2.878 s] [INFO] Cytoscape Work Swing API (work-swing-api) .......... SUCCESS [ 0.470 s] [INFO] Cytoscape Swing Application API (swing-application-api) SUCCESS [ 0.530 s] [INFO] Cytoscape VizMap GUI API (vizmap-gui-api) .......... SUCCESS [ 0.470 s] [INFO] Cytoscape Swing Utility API (swing-util-api) ....... SUCCESS [ 0.592 s] [INFO] Cytoscape Webservice Swing API (webservice-swing-api) SUCCESS [ 0.264 s] [INFO] Cytoscape Swing App API (swing-app-api) ............ SUCCESS [ 21.652 s] [INFO] Cytoscape Util API (util-api) ...................... SUCCESS [ 0.361 s] [INFO] Cytoscape API (api-bundle) ......................... SUCCESS [ 0.984 s] [INFO] Cytoscape Implementation Parent Project POM ........ SUCCESS [ 1.826 s] [INFO] Cytoscape Equations Impl (equations-impl) .......... SUCCESS [ 0.900 s] [INFO] Cytoscape Model Impl Parent (model-impl-parent) .... SUCCESS [ 1.730 s] [INFO] Cytoscape Model Impl (model-impl) .................. SUCCESS [ 0.933 s] [INFO] Cytoscape Command Executor Impl (command-executor-impl) SUCCESS [ 0.723 s] [INFO] Cytoscape Ding Impl Parent (ding-impl) ............. SUCCESS [ 1.701 s] [INFO] Cytoscape Ding View/Presentation Impl (ding-presentation-impl) SUCCESS [ 4.823 s] [INFO] Cytoscape View Model Impl Parent (viewmodel-impl-parent) SUCCESS [ 1.476 s] [INFO] Cytoscape View Model Impl (viewmodel-impl) ......... SUCCESS [ 0.465 s] [INFO] Cytoscape Groups Impl (group-impl) ................. SUCCESS [ 0.664 s] [INFO] Cytoscape Event Impl Parent (event-impl-parent) .... SUCCESS [ 1.623 s] [INFO] Cytoscape Event Impl (event-impl) .................. SUCCESS [ 0.408 s] [INFO] Cytoscape Filters Impl (filter-impl) ............... SUCCESS [ 1.211 s] [INFO] Cytoscape Filters 2 Impl (filter2-impl) ............ SUCCESS [ 1.307 s] [INFO] Cytoscape IO Impl Parent (io-impl-parent) .......... SUCCESS [ 1.408 s] [INFO] Cytoscape IO Impl (io-impl) ........................ SUCCESS [ 2.045 s] [INFO] Cytoscape Layout Impl (layout-impl) ................ SUCCESS [ 0.486 s] [INFO] Cytoscape Ding View/Presentation Impl Performance (ding-impl-performance-debug) SUCCESS [ 25.584 s] [INFO] Cytoscape Editor Impl (editor-impl) ................ SUCCESS [ 0.772 s] [INFO] Cytoscape Equation Functions Impl (equations-functions-impl) SUCCESS [ 0.611 s] [INFO] Cytoscape GraphML Impl (graphml-impl) .............. SUCCESS [ 0.662 s] [INFO] Cytoscape IO Impl Performance (io-impl-performance) SUCCESS [ 9.455 s] [INFO] Cytoscape Jobs Impl (jobs-impl) .................... SUCCESS [ 1.041 s] [INFO] Cytoscape Layout Algorithms Impl (layout-cytoscape-impl) SUCCESS [ 2.125 s] [INFO] Cytoscape JGraph Layout Impl (layout-jgraph-impl) .. SUCCESS [ 0.435 s] [INFO] Cytoscape Prefuse Layout Impl (layout-prefuse-impl) SUCCESS [ 0.560 s] [INFO] Cytoscape Linkout Impl (linkout-impl) .............. SUCCESS [ 0.416 s] [INFO] Cytoscape Log Swing Impl (log-swing-impl) .......... SUCCESS [ 0.515 s] [INFO] Cytoscape Manual Layout Impl (manual-layout-impl) .. SUCCESS [ 0.747 s] [INFO] Cytoscape Model Impl Performance Debug (model-impl-performance-debug) SUCCESS [ 1.996 s] [INFO] Cytoscape Model Impl Table Performance Debug (model-impl-table-performance-debug) SUCCESS [ 1.744 s] [INFO] Cytoscape App Impl (app-impl) ...................... SUCCESS [ 1.436 s] [INFO] Cytoscape Presentation Impl (presentation-impl) .... SUCCESS [ 0.391 s] [INFO] Cytoscape Property Impl (property-impl) ............ SUCCESS [ 0.330 s] [INFO] Cytoscape Search Impl (search-impl) ................ SUCCESS [ 0.347 s] [INFO] Cytoscape Session Impl (session-impl) .............. SUCCESS [ 0.295 s] [INFO] Cytoscape Swing Utility Impl (swing-util-impl) ..... SUCCESS [ 0.307 s] [INFO] Cytoscape Swing Application Impl (swing-application-impl) SUCCESS [ 2.063 s] [INFO] Cytoscape Table Browser Impl (table-browser-impl) .. SUCCESS [ 1.001 s] [INFO] Cytoscape Table Import Impl (table-import-impl) .... SUCCESS [ 4.964 s] [INFO] Cytoscape VizMap GUI Core Impl (vizmap-gui-core-impl) SUCCESS [ 0.272 s] [INFO] Cytoscape VizMap GUI Impl (vizmap-gui-impl) ........ SUCCESS [ 1.794 s] [INFO] Cytoscape VizMap Impl Parent (vizmap-impl-parent) .. SUCCESS [ 1.615 s] [INFO] Cytoscape VizMap Impl (vizmap-impl) ................ SUCCESS [ 0.464 s] [INFO] Cytoscape Webservice Impl (webservice-impl) ........ SUCCESS [ 0.362 s] [INFO] org.cytoscape.work-headless-impl ................... SUCCESS [ 0.358 s] [INFO] org.cytoscape.work-impl ............................ SUCCESS [ 0.373 s] [INFO] Cytoscape Work Swing Impl Parent (work-swing-impl-parent) SUCCESS [ 1.500 s] [INFO] Cytoscape Work Swing Impl (work-swing-impl) ........ SUCCESS [ 1.059 s] [INFO] Cytoscape Application Impl (application-impl) ...... SUCCESS [ 0.352 s] [INFO] Cytoscape Datasource Impl (datasource-impl) ........ SUCCESS [ 0.287 s] [INFO] Cytoscape Support Parent Project POM ............... SUCCESS [ 0.005 s] [INFO] Cytoscape Launch Framework ......................... SUCCESS [ 0.004 s] [INFO] CommandLine Provider ............................... SUCCESS [ 0.130 s] [INFO] Cytoscape GUI Command Line Parser Impl (gui-cmdline-parser-impl) SUCCESS [ 0.283 s] [INFO] Cytoscape Edge Bundler Impl (edge-bundler-impl) .... SUCCESS [ 0.299 s] [INFO] Cytoscape Scripting Impl (scripting-impl) .......... SUCCESS [ 0.404 s] [INFO] Cytoscape Core Task Impl (core-task-impl) .......... SUCCESS [ 2.511 s] [INFO] Cytoscape Headless Application Impl (headless-application-impl) SUCCESS [ 0.263 s] [INFO] org.cytoscape.cy-commons-cli ....................... SUCCESS [ 0.177 s] [INFO] Cytoscape Headless Command Line Parser Impl (headless-cmdline-parser-impl) SUCCESS [ 0.256 s] [INFO] Cytoscape 3 App Archetypes Parent .................. SUCCESS [ 0.117 s] [INFO] Cytoscape 3 Archetype - Creates an App providing public API SUCCESS [ 0.333 s] [INFO] Cytoscape 3 Archetype - Creates an App with a Task . SUCCESS [ 0.025 s] [INFO] Cytoscape 3 Archetype - Creates a CyAction (menu item) for desktop application SUCCESS [ 0.023 s] [INFO] Cytoscape 3 Archetype - Creates a Meta-App to install multiple related apps SUCCESS [ 0.016 s] [INFO] org.cytoscape.integration-test-support ............. SUCCESS [ 0.169 s] [INFO] Launcher ........................................... SUCCESS [ 0.488 s] [INFO] StartLevel Assembly ................................ SUCCESS [ 0.026 s] [INFO] Tasks for Testing .................................. SUCCESS [ 0.195 s] [INFO] Cytoscape Desktop Application Distribution ......... SUCCESS [ 0.005 s] [INFO] Cytoscape Third-Party Dependencies (third-party) ... SUCCESS [ 52.270 s] [INFO] SplashScreen Launcher .............................. SUCCESS [ 2.300 s] [INFO] Cytoscape Launcher ................................. SUCCESS [ 0.295 s] [INFO] Splash Updater ..................................... SUCCESS [ 0.409 s] [INFO] Cytoscape Command Line Provider Implementation ..... SUCCESS [ 0.171 s] [INFO] Cytoscape Diagnostics .............................. SUCCESS [ 0.374 s] [INFO] Cytoscape Branding ................................. SUCCESS [ 0.237 s] [INFO] Cytoscape Application Implementation Metadata ...... SUCCESS [ 0.108 s] [INFO] Cytoscape GUI-Distribution Integration Test (integration-test) SUCCESS [ 0.483 s] [INFO] Cytoscape Feature Repository ....................... SUCCESS [ 0.045 s] [INFO] Cytoscape Karaf Distribution ....................... FAILURE [ 17.822 s] [INFO] Distribution ....................................... SUCCESS [01:27 min] [INFO] Cytoscape Project POM .............................. SUCCESS [ 0.826 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 05:06 min [INFO] Finished at: 2024-05-21T06:31:54Z [INFO] ------------------------------------------------------------------------ [ERROR] Failed to execute goal org.apache.maven.plugins:maven-assembly-plugin:2.5.5:single (windows-bin) on project cytoscape: Failed to create assembly: Error creating assembly archive windows: Problem creating zip: Execution exception: Java heap space -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn -rf org.cytoscape.distribution:cytoscape *** Error code 1 Stop. make: stopped in /usr/ports/biology/cytoscape