[package - 140amd64-default][science/fastjet] Failed for fastjet-3.4.2 in configure
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Date: Tue, 27 Feb 2024 20:20:12 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy12/data/140amd64-default/43e3af5f5763/logs/fastjet-3.4.2.log
Build URL: https://pkg-status.freebsd.org/beefy12/build.html?mastername=140amd64-default&build=43e3af5f5763
Log:
=>> Building science/fastjet
build started at Tue Feb 27 20:19:40 UTC 2024
port directory: /usr/ports/science/fastjet
package name: fastjet-3.4.2
building for: FreeBSD 140amd64-default-job-06 14.0-RELEASE-p5 FreeBSD 14.0-RELEASE-p5 amd64
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 1525 Aug 26 2023 /usr/ports/science/fastjet/Makefile
Ports top last git commit: 43e3af5f57
Ports top unclean checkout: no
Port dir last git commit: 157c391cc1
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.1-1-g1e9f97d6
Host OSVERSION: 1500006
Jail OSVERSION: 1400097
Job Id: 06
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PORT_FLAGS=
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---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
===> The following configuration options are available for fastjet-3.4.2:
CGAL=on: Build with CGAL computational geometry library
PYTHON=on: Python bindings or support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--enable-allplugins --enable-cgal-header-only --enable-cgal --enable-pyext --enable-swig --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
PYTHON_CONFIG=/usr/local/bin/python3.9-config F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" MAKE=gmake PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/fastjet/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/fastjet/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/fastjet/work/.cache HOME=/wrkdirs/usr/ports/science/fastjet/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/fastjet/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/fastjet/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/
local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/science/fastjet/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/fastjet/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/fastjet/work/.cache HOME=/wrkdirs/usr/ports/science/fastjet/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/fastjet/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/fastjet/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/
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--End MAKE_ENV--
--PLIST_SUB--
CGAL="" NO_CGAL="@comment " PYTHON="" NO_PYTHON="@comment " PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/fastjet" EXAMPLESDIR="share/examples/fastjet" DATADIR="share/fastjet" WWWDIR="www/fastjet" ETCDIR="etc/fastjet"
--End PLIST_SUB--
--SUB_LIST--
CGAL="" NO_CGAL="@comment " PYTHON="" NO_PYTHON="@comment " PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/fastjet DOCSDIR=/usr/local/share/doc/fastjet EXAMPLESDIR=/usr/local/share/examples/fastjet WWWDIR=/usr/local/www/fastjet ETCDIR=/usr/local/etc/fastjet
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 33554432
stack size (kbytes, -s) 524288
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> fastjet-3.4.2 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.20.9_1.pkg
[140amd64-default-job-06] Installing pkg-1.20.9_1...
[140amd64-default-job-06] Extracting pkg-1.20.9_1: .......... done
===> fastjet-3.4.2 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of fastjet-3.4.2
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by fastjet-3.4.2 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by fastjet-3.4.2 for building
=> SHA256 Checksum OK for fastjet-3.4.2.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by fastjet-3.4.2 for building
===> Extracting for fastjet-3.4.2
=> SHA256 Checksum OK for fastjet-3.4.2.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for fastjet-3.4.2
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> fastjet-3.4.2 depends on package: cgal>0 - not found
===> Installing existing package /packages/All/cgal-5.5.1_1.pkg
[140amd64-default-job-06] Installing cgal-5.5.1_1...
[140amd64-default-job-06] `-- Installing boost-libs-1.84.0...
[140amd64-default-job-06] | `-- Installing icu-74.2,1...
[140amd64-default-job-06] | `-- Extracting icu-74.2,1: .......... done
[140amd64-default-job-06] `-- Extracting boost-libs-1.84.0: .......... done
[140amd64-default-job-06] `-- Installing gmp-6.3.0...
[140amd64-default-job-06] | `-- Installing indexinfo-0.3.1...
[140amd64-default-job-06] | `-- Extracting indexinfo-0.3.1: .... done
[140amd64-default-job-06] `-- Extracting gmp-6.3.0: .......... done
[140amd64-default-job-06] `-- Installing mpfr-4.2.1,1...
[140amd64-default-job-06] `-- Extracting mpfr-4.2.1,1: .......... done
[140amd64-default-job-06] Extracting cgal-5.5.1_1: .......... done
=====
Message from boost-libs-1.84.0:
--
You have built the Boost library with thread support.
Don't forget to add -pthread to your linker options when
linking your code.
===> fastjet-3.4.2 depends on package: cgal>0 - found
===> Returning to build of fastjet-3.4.2
===> fastjet-3.4.2 depends on file: /usr/local/include/mpfr.h - found
===> fastjet-3.4.2 depends on executable: swig - not found
===> Installing existing package /packages/All/swig-4.1.1.pkg
[140amd64-default-job-06] Installing swig-4.1.1...
[140amd64-default-job-06] `-- Installing pcre2-10.43...
[140amd64-default-job-06] `-- Extracting pcre2-10.43: .......... done
[140amd64-default-job-06] Extracting swig-4.1.1: .......... done
===> fastjet-3.4.2 depends on executable: swig - found
===> Returning to build of fastjet-3.4.2
===> fastjet-3.4.2 depends on executable: gfortran13 - not found
===> Installing existing package /packages/All/gcc13-13.2.0_4.pkg
[140amd64-default-job-06] Installing gcc13-13.2.0_4...
[140amd64-default-job-06] `-- Installing binutils-2.40_5,1...
[140amd64-default-job-06] | `-- Installing gettext-runtime-0.22.3_1...
[140amd64-default-job-06] | `-- Extracting gettext-runtime-0.22.3_1: .......... done
[140amd64-default-job-06] | `-- Installing zstd-1.5.5_1...
[140amd64-default-job-06] | | `-- Installing liblz4-1.9.4_1,1...
[140amd64-default-job-06] | | `-- Extracting liblz4-1.9.4_1,1: .......... done
[140amd64-default-job-06] | `-- Extracting zstd-1.5.5_1: .......... done
[140amd64-default-job-06] `-- Extracting binutils-2.40_5,1: .......... done
[140amd64-default-job-06] `-- Installing mpc-1.3.1_1...
[140amd64-default-job-06] `-- Extracting mpc-1.3.1_1: ......... done
[140amd64-default-job-06] Extracting gcc13-13.2.0_4: .......... done
=====
Message from gcc13-13.2.0_4:
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc13
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> fastjet-3.4.2 depends on executable: gfortran13 - found
===> Returning to build of fastjet-3.4.2
===> fastjet-3.4.2 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_3.pkg
[140amd64-default-job-06] Installing gmake-4.3_3...
[140amd64-default-job-06] Extracting gmake-4.3_3: .......... done
===> fastjet-3.4.2 depends on package: gmake>=4.3 - found
===> Returning to build of fastjet-3.4.2
===> fastjet-3.4.2 depends on file: /usr/local/bin/python3.9 - not found
===> Installing existing package /packages/All/python39-3.9.18_1.pkg
[140amd64-default-job-06] Installing python39-3.9.18_1...
[140amd64-default-job-06] `-- Installing libffi-3.4.4_1...
[140amd64-default-job-06] `-- Extracting libffi-3.4.4_1: .......... done
[140amd64-default-job-06] `-- Installing mpdecimal-2.5.1...
[140amd64-default-job-06] `-- Extracting mpdecimal-2.5.1: .......... done
[140amd64-default-job-06] `-- Installing readline-8.2.7_1...
[140amd64-default-job-06] `-- Extracting readline-8.2.7_1: .......... done
[140amd64-default-job-06] Extracting python39-3.9.18_1: .......... done
=====
Message from python39-3.9.18_1:
--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
py39-gdbm databases/py-gdbm@py39
py39-sqlite3 databases/py-sqlite3@py39
py39-tkinter x11-toolkits/py-tkinter@py39
===> fastjet-3.4.2 depends on file: /usr/local/bin/python3.9 - found
===> Returning to build of fastjet-3.4.2
===> fastjet-3.4.2 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> fastjet-3.4.2 depends on shared library: libgmp.so - found (/usr/local/lib/libgmp.so)
===========================================================================
=======================<phase: configure >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Configuring for fastjet-3.4.2
configure: loading site script /usr/ports/Templates/config.site
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a race-free mkdir -p... (cached) /bin/mkdir -p
checking for gawk... (cached) /usr/bin/awk
checking whether gmake sets $(MAKE)... yes
checking whether gmake supports nested variables... yes
checking whether UID '0' is supported by ustar format... yes
checking whether GID '0' is supported by ustar format... yes
checking how to create a ustar tar archive... (cached) /usr/bin/tar
checking whether gmake supports the include directive... yes (GNU style)
checking for gcc... cc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether cc accepts -g... yes
checking for cc option to enable C11 features... none needed
checking whether cc understands -c and -o together... yes
checking dependency style of cc... gcc3
checking for stdio.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for inttypes.h... (cached) yes
checking for stdint.h... (cached) yes
checking for strings.h... (cached) yes
checking for sys/stat.h... (cached) yes
checking for sys/types.h... (cached) yes
checking for unistd.h... (cached) yes
checking for int... (cached) yes
checking for long... (cached) yes
checking whether the compiler supports GNU C++... yes
checking whether c++ accepts -g... yes
checking for c++ option to enable C++11 features... none needed
checking dependency style of c++... gcc3
checking for c++... yes
checking whether ln -s works... yes
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking whether gmake sets $(MAKE)... (cached) yes
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking if c++ supports -Woverloaded-virtual flag... yes
checking if c++ -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include supports the "[[deprecated]]" keyword... yes
checking if c++ -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include supports the "__attribute__((deprecated))" keyword... yes
checking if c++ -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include supports the "override" keyword... yes
checking if c++ -g -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include supports the "[[deprecated]]" keyword... yes
checking if c++ -g -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include supports the "__attribute__((deprecated))" keyword... yes
checking if c++ -g -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include supports the "override" keyword... yes
checking if c++ -g -Woverloaded-virtual -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include supports the "explicit" keyword for operators... yes
checking for execinfo.h... yes
checking for cos in -lm... yes
checking CGAL_MAKEFILE... inexistent
checking whether C++ compiler accepts -frounding-math -Werror... yes
checking whether C++ compiler accepts -fp-model strict -Werror... no
checking for gmp.h... yes
checking for main in -lgmp... yes
checking for mpfr.h... yes
checking for CGAL/Exact_predicates_inexact_constructions_kernel.h... no
checking CGAL... no
configure: error: CGAL explicitly requested and not found or not functional
===> Script "configure" failed unexpectedly.
Please report the problem to yuri@FreeBSD.org [maintainer] and attach the
"/wrkdirs/usr/ports/science/fastjet/work/fastjet-3.4.2/config.log" including
the output of the failure of your make command. Also, it might be a good idea
to provide an overview of all packages installed on your system (e.g. a
/usr/local/sbin/pkg-static info -g -Ea).
*** Error code 1
Stop.
make: stopped in /usr/ports/science/fastjet