From nobody Tue Feb 27 15:55:51 2024 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4Tkhsh064Zz5Bwqf for ; Tue, 27 Feb 2024 15:55:52 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4Tkhsg59lhz4ZK9 for ; Tue, 27 Feb 2024 15:55:51 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1709049351; a=rsa-sha256; cv=none; b=CpRjSoea3wpnp3CF+cNoCGj20yjG4cK9hSc0BQOpWSZKjWRjtyftK6g5TK3xTnJs6/oCaB pTziCAw07KpoIOkpqu2+YJ0D0SCqLqVoaNW7c1GBnFL1sYj6sFoG7gsmj/W2uf84KzNrYF 9HcsPv8EaolL/vW0q83Wxxd663fQzr4hGt4HVLwhO+GNep/pCoudKF61fIkocDot2PkfL0 t2XjnW9zFEk98v9E9rKLDX9RkQqEhEjlsbyZpu1hMd6PX/TD1tKB34JqAy/j48J4x8ug/A xmAMaDragkbx7kGCkSfU/sj87Yz3Z8OOSYuDlcEKfEL+H0WEQ79bDCkYwLNoRg== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1709049351; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:cc; bh=ZhfcEgCL6mPDqwEMV/2X8xJtt410QZg+gsGWij3tp5Q=; b=M4E5ZL20zuE7qSvRMex5LytppHNM8VNmz95OTrXfOiFlWskpYQG/SQym+1RmL0KpklJ3DZ iIDpY6EznX00kn74UqARf8MB16Kxr+t1EssgQhOI1hdNoLkLWQlyBDYMBVgDOWaaUttiLN kFoEcAVh7RVuOdMp/3OguvBOZ/CSXT2pYMDspxAYWxdfjZ7cJ0a8HVdvGB99lc4zcJGY9O Ls09legRbmrgHsl86GX30HOWWhRDlHW3QgUmnmHe9dVDVvz66kzqHKUNFKza8bRJrPC5KG LbyuTHAx3sU3k1nXUkEr+hffrn4FyKjl9ve109Exm0klQGSZ8qWgJ3FOs7MUbg== Received: from beefy12.nyi.freebsd.org (beefy12.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:1b]) by mxrelay.nyi.freebsd.org (Postfix) with ESMTP id 4Tkhsg465gzJjY for ; Tue, 27 Feb 2024 15:55:51 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from root (uid 0) (envelope-from pkg-fallout@FreeBSD.org) id 8195 by beefy12.nyi.freebsd.org (DragonFly Mail Agent v0.13+ on beefy12.nyi.freebsd.org); Tue, 27 Feb 2024 15:55:51 +0000 To: yuri@FreeBSD.org Subject: [package - 140amd64-default][biology/figtree] Failed for figtree-1.4.4.14 in stage Cc: pkg-fallout@FreeBSD.org Date: Tue, 27 Feb 2024 15:55:51 +0000 Message-Id: <65de0607.8195.3464d09a@beefy12.nyi.freebsd.org> From: List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: https://pkg-status.freebsd.org/beefy12/data/140amd64-default/43e3af5f5763/logs/figtree-1.4.4.14.log Build URL: https://pkg-status.freebsd.org/beefy12/build.html?mastername=140amd64-default&build=43e3af5f5763 Log: =>> Building biology/figtree build started at Tue Feb 27 15:55:31 UTC 2024 port directory: /usr/ports/biology/figtree package name: figtree-1.4.4.14 building for: FreeBSD 140amd64-default-job-09 14.0-RELEASE-p5 FreeBSD 14.0-RELEASE-p5 amd64 maintained by: yuri@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1156 Aug 26 2023 /usr/ports/biology/figtree/Makefile Ports top last git commit: 43e3af5f57 Ports top unclean checkout: no Port dir last git commit: 157c391cc1 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.1-1-g1e9f97d6 Host OSVERSION: 1500006 Jail OSVERSION: 1400097 Job Id: 09 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1400097 UNAME_v=FreeBSD 14.0-RELEASE-p5 UNAME_r=14.0-RELEASE-p5 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.1-1-g1e9f97d6 MASTERMNT=/usr/local/poudriere/data/.m/140amd64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/140amd64-default/09/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=140amd64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/140amd64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.1-1-g1e9f97d6 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/figtree/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/figtree/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/figtree/work/.cache HOME=/wrkdirs/usr/ports/biology/figtree/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/figtree/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/figtree/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- JAVA_HOME=/usr/local/openjdk17 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/figtree/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/figtree/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/figtree/work/.cache HOME=/wrkdirs/usr/ports/biology/figtree/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/figtree/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/figtree/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_IN STALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/figtree" EXAMPLESDIR="share/examples/figtree" DATADIR="share/figtree" WWWDIR="www/figtree" ETCDIR="etc/figtree" --End PLIST_SUB-- --SUB_LIST-- JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" JAVA_VERSION="17" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/figtree DOCSDIR=/usr/local/share/doc/figtree EXAMPLESDIR=/usr/local/share/examples/figtree WWWDIR=/usr/local/www/figtree ETCDIR=/usr/local/etc/figtree --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv2 accepted by the user =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> figtree-1.4.4.14 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.20.9_1.pkg [140amd64-default-job-09] Installing pkg-1.20.9_1... [140amd64-default-job-09] Extracting pkg-1.20.9_1: .......... done ===> figtree-1.4.4.14 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of figtree-1.4.4.14 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by figtree-1.4.4.14 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by figtree-1.4.4.14 for building => SHA256 Checksum OK for rambaut-figtree-v1.4.4-14-gf9085b6_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License GPLv2 accepted by the user ===> Fetching all distfiles required by figtree-1.4.4.14 for building ===> Extracting for figtree-1.4.4.14 => SHA256 Checksum OK for rambaut-figtree-v1.4.4-14-gf9085b6_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for figtree-1.4.4.14 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> figtree-1.4.4.14 depends on file: /usr/local/openjdk17/bin/java - not found ===> Installing existing package /packages/All/openjdk17-17.0.10+7.1_1.pkg [140amd64-default-job-09] Installing openjdk17-17.0.10+7.1_1... [140amd64-default-job-09] `-- Installing alsa-lib-1.2.10_1... [140amd64-default-job-09] `-- Extracting alsa-lib-1.2.10_1: .......... done [140amd64-default-job-09] `-- Installing fontconfig-2.15.0_2,1... [140amd64-default-job-09] | `-- Installing expat-2.6.0... [140amd64-default-job-09] | `-- Extracting expat-2.6.0: .......... done [140amd64-default-job-09] | `-- Installing freetype2-2.13.2... [140amd64-default-job-09] | | `-- Installing brotli-1.1.0,1... [140amd64-default-job-09] | | `-- Extracting brotli-1.1.0,1: .......... done [140amd64-default-job-09] | | `-- Installing png-1.6.42... [140amd64-default-job-09] | | `-- Extracting png-1.6.42: .......... done [140amd64-default-job-09] | `-- Extracting freetype2-2.13.2: .......... done [140amd64-default-job-09] `-- Extracting fontconfig-2.15.0_2,1: .......... done [140amd64-default-job-09] `-- Installing giflib-5.2.1_1... [140amd64-default-job-09] `-- Extracting giflib-5.2.1_1: .......... done [140amd64-default-job-09] `-- Installing harfbuzz-8.3.0... [140amd64-default-job-09] | `-- Installing gettext-runtime-0.22.3_1... [140amd64-default-job-09] | | `-- Installing indexinfo-0.3.1... [140amd64-default-job-09] | | `-- Extracting indexinfo-0.3.1: .... done [140amd64-default-job-09] | `-- Extracting gettext-runtime-0.22.3_1: .......... done [140amd64-default-job-09] | `-- Installing glib-2.78.4,2... [140amd64-default-job-09] | | `-- Installing libffi-3.4.4_1... [140amd64-default-job-09] | | `-- Extracting libffi-3.4.4_1: .......... done [140amd64-default-job-09] | | `-- Installing libiconv-1.17_1... [140amd64-default-job-09] | | `-- Extracting libiconv-1.17_1: .......... done Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===== Message from openjdk17-17.0.10+7.1_1: -- This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and procfs(5) mounted on /proc. If you have not done it yet, please do the following: mount -t fdescfs fdesc /dev/fd mount -t procfs proc /proc To make it permanent, you need the following lines in /etc/fstab: fdesc /dev/fd fdescfs rw 0 0 proc /proc procfs rw 0 0 ===> figtree-1.4.4.14 depends on file: /usr/local/openjdk17/bin/java - found ===> Returning to build of figtree-1.4.4.14 ===> figtree-1.4.4.14 depends on file: /usr/local/bin/ant - not found ===> Installing existing package /packages/All/apache-ant-1.10.13_1.pkg [140amd64-default-job-09] Installing apache-ant-1.10.13_1... [140amd64-default-job-09] `-- Installing openjdk8-8.402.06.1_1... [140amd64-default-job-09] | `-- Installing java-zoneinfo-2021.e... [140amd64-default-job-09] | `-- Extracting java-zoneinfo-2021.e: .......... done [140amd64-default-job-09] | `-- Installing libinotify-20211018_1... [140amd64-default-job-09] | `-- Extracting libinotify-20211018_1: .......... done [140amd64-default-job-09] `-- Extracting openjdk8-8.402.06.1_1: .......... done [140amd64-default-job-09] Extracting apache-ant-1.10.13_1: .......... done ===== Message from libinotify-20211018_1: -- You might want to consider increasing the kern.maxfiles tunable if you plan to use this library for applications that need to monitor activity of a lot of files. ===== Message from openjdk8-8.402.06.1_1: -- This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and procfs(5) mounted on /proc. If you have not done it yet, please do the following: mount -t fdescfs fdesc /dev/fd mount -t procfs proc /proc To make it permanent, you need the following lines in /etc/fstab: fdesc /dev/fd fdescfs rw 0 0 proc /proc procfs rw 0 0 ===> figtree-1.4.4.14 depends on file: /usr/local/bin/ant - found ===> Returning to build of figtree-1.4.4.14 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for figtree-1.4.4.14 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for figtree-1.4.4.14 Buildfile: /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build.xml init: [mkdir] Created dir: /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build [mkdir] Created dir: /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/dist compile: [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build.xml:39: warning: 'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to false for repeatable builds [javac] Compiling 130 source files to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/applet/FigTreeApplet.java:54: warning: [removal] JApplet in javax.swing has been deprecated and marked for removal [javac] public class FigTreeApplet extends JApplet { [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/ui/components/RealNumberField.java:122: warning: [removal] Double(String) in Double has been deprecated and marked for removal [javac] return new Double(getText()); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/ui/components/RealNumberField.java:130: warning: [removal] Double(String) in Double has been deprecated and marked for removal [javac] return new Double(getText()); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/ui/components/RealNumberField.java:132: warning: [removal] Double(double) in Double has been deprecated and marked for removal [javac] return new Double(def); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/FigTreeFrame.java:1055: warning: [removal] Boolean(String) in Boolean has been deprecated and marked for removal [javac] values.put(taxon, new Boolean(valueString)); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/FigTreeFrame.java:1057: warning: [removal] Integer(String) in Integer has been deprecated and marked for removal [javac] values.put(taxon, new Integer(valueString)); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/FigTreeFrame.java:1059: warning: [removal] Double(String) in Double has been deprecated and marked for removal [javac] values.put(taxon, new Double(valueString)); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/treeviewer/annotations/AnnotationDialog.java:212: warning: [removal] Boolean(String) in Boolean has been deprecated and marked for removal [javac] return new Boolean(((JComboBox)component).getSelectedItem().toString()); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/ui/components/WholeNumberField.java:107: warning: [removal] Integer(String) in Integer has been deprecated and marked for removal [javac] return new Integer(getText()); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/ui/components/WholeNumberField.java:116: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal [javac] return new Integer(default_value); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/FigTreeNexusImporter.java:91: warning: [removal] Boolean(String) in Boolean has been deprecated and marked for removal [javac] return new Boolean(value); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/treeviewer/TimeScaleController.java:175: warning: [removal] Boolean(boolean) in Boolean has been deprecated and marked for removal [javac] settings.put(CONTROLLER_KEY + "." + SCALE_ROOT_KEY, new Boolean(scaleRootRadio.isSelected())); [javac] ^ [javac] /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/ui/RomanFormat.java:122: warning: [removal] Long(long) in Long has been deprecated and marked for removal [javac] return new Long(tot); [javac] ^ [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. [javac] 14 warnings [copy] Copying 54 files to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/actionButton.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/actionButton.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/actionButtonInactive.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/actionButtonInactive.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/actionButtonPressed.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/actionButtonPressed.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/add.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/add.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/addButton.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/addButton.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/addButtonInactive.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/addButtonInactive.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/addButtonPressed.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/addButtonPressed.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/annotation.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/annotation.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/annotationTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/annotationTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/cartoonNodeTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/cartoonNodeTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/chartTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/chartTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/collapseNodeTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/collapseNodeTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/coloursTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/coloursTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/crosshairCursor.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/crosshairCursor.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/dataEditorTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/dataEditorTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/document.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/document.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/exportTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/exportTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/figtree.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/figtree.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/figtreeLogo.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/figtreeLogo.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/filterBackground.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/filterBackground.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/find.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/find.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/findTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/findTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/fontBiggerTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/fontBiggerTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/fontSmallerTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/fontSmallerTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/hilightTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/hilightTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/import.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/import.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/infoTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/infoTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/minus.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/minus.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/next.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/next.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/nextButton.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/nextButton.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/nextButtonInactive.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/nextButtonInactive.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/nextButtonPressed.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/nextButtonPressed.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/prefsAdvanced.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/prefsAdvanced.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/prefsClipboard.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/prefsClipboard.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/prefsFonts.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/prefsFonts.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/prefsGeneral.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/prefsGeneral.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/prev.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/prev.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/previousButton.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/previousButton.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/previousButtonInactive.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/previousButtonInactive.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/previousButtonPressed.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/previousButtonPressed.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/project.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/project.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/projectTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/projectTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/publication.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/publication.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/removeButton.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/removeButton.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/removeButtonInactive.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/removeButtonInactive.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/removeButtonPressed.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/removeButtonPressed.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/rerootTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/rerootTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/rotateTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/rotateTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/statisticsTool.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/statisticsTool.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/tableSelection.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/tableSelection.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/application/images/tableSelectionGray.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/application/images/tableSelectionGray.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/treeviewer/images/polarTree.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/treeviewer/images/polarTree.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/treeviewer/images/radialTree.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/treeviewer/images/radialTree.png [copy] Copying /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/src/figtree/treeviewer/images/rectangularTree.png to /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/build/figtree/treeviewer/images/rectangularTree.png dist: [jar] Building jar: /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/dist/figtree.jar [jar] Building jar: /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/dist/figtreepanel.jar [jar] Building jar: /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/dist/figtree-pdf.jar [war] Building war: /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/dist/figtree.war BUILD SUCCESSFUL Total time: 10 seconds =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> figtree-1.4.4.14 depends on file: /usr/local/openjdk17/bin/java - found =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Staging for figtree-1.4.4.14 ===> Generating temporary packing list install -m 0644 /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/dist/*.jar /wrkdirs/usr/ports/biology/figtree/work/stage/usr/local/share/java/classes install -m 0644 /wrkdirs/usr/ports/biology/figtree/work/figtree-1.4.4-14-gf9085b6/release/Linux/icons/figtree.png /wrkdirs/usr/ports/biology/figtree/work/stage/usr/local/share/pixmaps/figtree.png install: /wrkdirs/usr/ports/biology/figtree/work/stage/usr/local/share/pixmaps/figtree.png: No such file or directory *** Error code 71 Stop. make: stopped in /usr/ports/biology/figtree