From nobody Tue Feb 20 02:43:24 2024 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4Tf3cX6VH1z5B48r for ; Tue, 20 Feb 2024 02:43:24 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4Tf3cX4Xlyz44mk for ; Tue, 20 Feb 2024 02:43:24 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1708397004; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc; bh=847W6D7FA1mUYDSSJOtdgbm/nsWP2BY29YsN5g/QZoM=; b=FcNIsopTfVtbp/Xthmn2z+mQuJYJBL2e7Vdv9LbApHrlCB1QLOeg6ZYPaXM6M0iJCFtkqP Ce9Ah8NxNWG8lWhgkSU3zoFfbGjQtYjlpbQp2qqsWdvKsJWybX9/Sz7wEKsN9/goERIaNx qw38oSNUeVYMa9c9X3G0DDYPN6zqO+ofZYpDLZQKt0zgMKyRlTzAHHJqrWv47lWBY46NzT Z2cP0iktX/iPk+LAN6+WeRlgldG+SrnjegLIRqXl4qljv64LCSD+I4AWoXmktY/ib1DruQ mQE2S+mDvCd919EPyYkrMPuw5NKorfXPjaAAiDnTzNoRv/ZLxjcI+5ECQ7b23A== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1708397004; a=rsa-sha256; cv=none; b=vBUHEkA4vXsjDcpfD7cjs+M0bxvNspzajYSQbsxxD35zczIzEJ9u6+55N7gGlUZ8hywJJx L4zOQBCjsA+dhHzHnB1uTS+ILSD8+qF0JIrIlcscgDz7Lc/TvH3/4wt1MVuhJH+h/6YSgm SfvTQGiIrWJnVT9EjA+Xi2t4rq/YKjc0W6f/2k++wsrHh8iFbEz78awViZBtuWqTWOT/bK NxJ0Gvyq6M+gCiJIly2zROAoVPV7gPSdov+bQvXKMtRMGwaf1YFVHuFstDLh1Qps0JtsL8 if1Op7Vm95YOBj8EA2epH7a7S+XsEdK2Y32GdbVt6olbumsBeLuLEuYGF3YXHQ== Received: from foul2.nyi.freebsd.org (foul2.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:27]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4Tf3cX3bx9z11MZ for ; Tue, 20 Feb 2024 02:43:24 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from foul2.nyi.freebsd.org (localhost [127.0.0.1]) by foul2.nyi.freebsd.org (8.17.1/8.17.1) with ESMTP id 41K2hOi5028304 for ; Tue, 20 Feb 2024 02:43:24 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by foul2.nyi.freebsd.org (8.17.1/8.17.1/Submit) id 41K2hOwb028279; Tue, 20 Feb 2024 02:43:24 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Tue, 20 Feb 2024 02:43:24 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202402200243.41K2hOwb028279@foul2.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - 132powerpc64le-quarterly][biology/infernal] Failed for infernal-1.1.4 in configure List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: mzaki@e-mail.ne.jp Log URL: https://pkg-status.freebsd.org/foul2/data/132powerpc64le-quarterly/fdf998f5d103/logs/infernal-1.1.4.log Build URL: https://pkg-status.freebsd.org/foul2/build.html?mastername=132powerpc64le-quarterly&build=fdf998f5d103 Log: =>> Building biology/infernal build started at Tue Feb 20 02:42:29 UTC 2024 port directory: /usr/ports/biology/infernal package name: infernal-1.1.4 building for: FreeBSD 132powerpc64le-quarterly-job-12 13.2-RELEASE FreeBSD 13.2-RELEASE powerpc maintained by: mzaki@e-mail.ne.jp Makefile datestamp: -rw-r--r-- 1 root wheel 1645 Jan 6 01:03 /usr/ports/biology/infernal/Makefile Ports top last git commit: fdf998f5d Ports top unclean checkout: no Port dir last git commit: 756e18783 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.1-1-g1e9f97d6 Host OSVERSION: 1500000 Jail OSVERSION: 1302001 Job Id: 12 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1302001 UNAME_v=FreeBSD 13.2-RELEASE UNAME_r=13.2-RELEASE BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.1-1-g1e9f97d6 MASTERMNT=/usr/local/poudriere/data/.m/132powerpc64le-quarterly/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/132powerpc64le-quarterly/12/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=132powerpc64le-quarterly SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/132powerpc64le-quarterly/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.1-1-g1e9f97d6 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for infernal-1.1.4: DOCS=on: Build and/or install documentation EXAMPLES=on: Build and/or install examples TEST=off: Build and/or run tests ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- mzaki@e-mail.ne.jp --End MAINTAINER-- --CONFIGURE_ARGS-- --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/infernal/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/infernal/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/infernal/work/.cache HOME=/wrkdirs/usr/ports/biology/infernal/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/infernal/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/infernal/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 --End CONFIGURE_ENV-- --MAKE_ENV-- PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/infernal/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/infernal/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/infernal/work/.cache HOME=/wrkdirs/usr/ports/biology/infernal/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/infernal/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/infernal/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PORTDOCS="" PORTEXAMPLES="" PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=13.2 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.36.3 PERL_VER=5.36 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.36 DOCSDIR="share/doc/infernal" EXAMPLESDIR="share/examples/infernal" DATADIR="share/infernal" WWWDIR="www/infernal" ETCDIR="etc/infernal" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/infernal DOCSDIR=/usr/local/share/doc/infernal EXAMPLESDIR=/usr/local/share/examples/infernal WWWDIR=/usr/local/www/infernal ETCDIR=/usr/local/etc/infernal --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> infernal-1.1.4 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.20.9.pkg [132powerpc64le-quarterly-job-12] Installing pkg-1.20.9... [132powerpc64le-quarterly-job-12] Extracting pkg-1.20.9: .......... done ===> infernal-1.1.4 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of infernal-1.1.4 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by infernal-1.1.4 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by infernal-1.1.4 for building => SHA256 Checksum OK for infernal-1.1.4.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by infernal-1.1.4 for building ===> Extracting for infernal-1.1.4 => SHA256 Checksum OK for infernal-1.1.4.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for infernal-1.1.4 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> infernal-1.1.4 depends on package: gmake>=4.3 - not found ===> Installing existing package /packages/All/gmake-4.3_2.pkg [132powerpc64le-quarterly-job-12] Installing gmake-4.3_2... [132powerpc64le-quarterly-job-12] `-- Installing gettext-runtime-0.22.3... [132powerpc64le-quarterly-job-12] | `-- Installing indexinfo-0.3.1... [132powerpc64le-quarterly-job-12] | `-- Extracting indexinfo-0.3.1: .... done [132powerpc64le-quarterly-job-12] `-- Extracting gettext-runtime-0.22.3: .......... done [132powerpc64le-quarterly-job-12] Extracting gmake-4.3_2: .......... done ===> infernal-1.1.4 depends on package: gmake>=4.3 - found ===> Returning to build of infernal-1.1.4 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for infernal-1.1.4 configure: loading site script /usr/ports/Templates/config.site configure: Configuring Infernal for your system. checking build system type... powerpc64le-portbld-freebsd13.2 checking host system type... powerpc64le-portbld-freebsd13.2 checking whether to compile using MPI... no checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking for cc option to accept ISO C99... none needed checking for cc option to accept ISO Standard C... (cached) none needed checking how to run the C preprocessor... cpp checking for a BSD-compatible install... /usr/bin/install -c checking for ranlib... ranlib checking for ar... /usr/bin/ar checking whether ln -s works... yes checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for egrep... (cached) /usr/bin/egrep checking whether cc is Clang... yes checking whether Clang needs flag to prevent "argument unused" warning when linking with -pthread... no checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking whether more special flags are required for pthreads... no checking for PTHREAD_PRIO_INHERIT... yes checking whether cc can compile our Altivec/VMX code... yes checking whether cc can compile our SSE code... no configure: Activating Altivec/VMX vector DP implementation checking compiler support --start-group... yes checking for gzip... /usr/bin/gzip checking for python3... no checking for library containing clock_gettime... none required checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking endian.h usability... yes checking endian.h presence... yes checking for endian.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/types.h... (cached) yes checking for netinet/in.h... (cached) yes checking for sys/param.h... (cached) yes checking for sys/sysctl.h... (cached) yes checking altivec.h usability... yes checking altivec.h presence... yes checking for altivec.h... yes checking for uint8_t... (cached) yes checking for uint16_t... (cached) yes checking for uint32_t... (cached) yes checking for uint64_t... (cached) yes checking for off_t... (cached) yes checking whether byte ordering is bigendian... no configure: ::::::::::--- no vector instruction set ---:::::::::: configure: Infernal Altivec/VMX only supports bigendian platforms: e.g. ppc64 not ppc64le configure: error: No supported vectorization found for your machine. ===> Script "configure" failed unexpectedly. Please report the problem to mzaki@e-mail.ne.jp [maintainer] and attach the "/wrkdirs/usr/ports/biology/infernal/work/infernal-1.1.4/config.log" including the output of the failure of your make command. Also, it might be a good idea to provide an overview of all packages installed on your system (e.g. a /usr/local/sbin/pkg-static info -g -Ea). *** Error code 1 Stop. make: stopped in /usr/ports/biology/infernal