From nobody Tue Apr 30 01:18:50 2024 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4VT2Qf2xDQz5Hn1X for ; Tue, 30 Apr 2024 01:18:50 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4VT2Qf0dlkz4VS0 for ; Tue, 30 Apr 2024 01:18:50 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1714439930; a=rsa-sha256; cv=none; b=kDCQuVLEHLjSX9mt+oDS5vCBQUSfirqMzo3BtfKWozhBwKL/X0HRq9IkhHlWRZ5gDFoRPx PG1E3jkAb4wj5hdtAiRcFz2g+9V0dsC89JCrvcwiu526AsgBlnacS5U+PfYLPF0deC7ONy I5t88dXmzGkkQCh0gPZj0HmkZdLf3ipGBWRpOUhX4y6c5i0Nq4AkWn4LbjP4nMgD1C2Hmf EudnC3ZJMHFJZCuoEyIesM/w/u4SVqdRahlrNdGCifBeYTA0rAX5ylPEYKTaMs92cb/hqG oDGpOZOY21kif5x+WjxMdy3n3SIewtzm3u61SsXQ0ntQGJgxqblhDBNtaavS4w== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1714439930; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:cc; bh=otGA4I/pysIQHpofX6A6NwEgM8sxsHMNdsOoK85nt+4=; b=P+A3hX7M84pfOYjQP+YGIq3yL48S3bejBdoLa/8uzEEYo7yR7+f6Q5GWwKM814GxuM6EEj eQomv1T+nKCWo+Sp55S7/1mAO8ibsE7WKDaK/SwTGIG9HsxfXV5wuB013Oo3QEoou08BP/ CkUYuxna11JuKJHGdkdbIXhOI+VVPDLCHToW6oZILKp5KzYNWs9+IFi1fw0gocv0JKHh/U gUgSKJFnVg1WByOg2Xtj/iNFtCwnATIF8oYLTQVYV9kkrq2FLGL9g+A66FUWCYvovNWTMM FOdW4LBKpANo4JeeM9svl1DBBeb7T5yJok+sEek+OyHOl3uSbxJ3UF+J2gwUXQ== Received: from beefy19.nyi.freebsd.org (beefy19.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:22]) by mxrelay.nyi.freebsd.org (Postfix) with ESMTP id 4VT2Qf0CztzF3C for ; Tue, 30 Apr 2024 01:18:50 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from root (uid 0) (envelope-from pkg-fallout@FreeBSD.org) id 31d by beefy19.nyi.freebsd.org (DragonFly Mail Agent v0.13+ on beefy19.nyi.freebsd.org); Tue, 30 Apr 2024 01:18:50 +0000 To: jwb@FreeBSD.org Subject: [package - 140i386-quarterly][biology/py-macs3] Failed for py39-MACS3-3.0.1 in build Cc: pkg-fallout@FreeBSD.org Date: Tue, 30 Apr 2024 01:18:50 +0000 Message-Id: <663046fa.31d.729cef0e@beefy19.nyi.freebsd.org> From: List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@FreeBSD.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: jwb@FreeBSD.org Log URL: https://pkg-status.freebsd.org/beefy19/data/140i386-quarterly/1658bffbb679/logs/py39-MACS3-3.0.1.log Build URL: https://pkg-status.freebsd.org/beefy19/build.html?mastername=140i386-quarterly&build=1658bffbb679 Log: =>> Building biology/py-macs3 build started at Tue Apr 30 01:17:00 UTC 2024 port directory: /usr/ports/biology/py-macs3 package name: py39-MACS3-3.0.1 building for: FreeBSD 140i386-quarterly-job-04 14.0-RELEASE-p6 FreeBSD 14.0-RELEASE-p6 i386 maintained by: jwb@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1640 Apr 8 19:19 /usr/ports/biology/py-macs3/Makefile Ports top last git commit: 1658bffbb Ports top unclean checkout: no Port dir last git commit: b3aa1ea86 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.1-30-g79e3edcd Host OSVERSION: 1500018 Jail OSVERSION: 1400097 Job Id: 04 ---Begin Environment--- SHELL=/bin/sh BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 OSVERSION=1400097 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 UNAME_m=i386 UNAME_p=i386 UNAME_r=14.0-RELEASE-p6 LOCALBASE=/usr/local UNAME_v=FreeBSD 14.0-RELEASE-p6 USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.1-30-g79e3edcd MASTERMNT=/usr/local/poudriere/data/.m/140i386-quarterly/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/140i386-quarterly/04/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=140i386-quarterly SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/140i386-quarterly/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.1-30-g79e3edcd SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py39 MAKE_ARGS= FLAVOR=py39 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- jwb@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/biology/py-macs3/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/py-macs3/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/py-macs3/work-py39/.cache HOME=/wrkdirs/usr/ports/biology/py-macs3/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/py-macs3/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/py-macs3/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/py-macs3/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/py-macs3/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/py-macs3/work-py39/.cache HOME=/wrkdirs/usr/ports/biology/py-macs3/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/py-macs3/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/py-macs3/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing - isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.36.3 PERL_VER=5.36 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.36 DOCSDIR="share/doc/py39-MACS3" EXAMPLESDIR="share/examples/py39-MACS3" DATADIR="share/py39-MACS3" WWWDIR="www/py39-MACS3" ETCDIR="etc/py39-MACS3" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py39-MACS3 DOCSDIR=/usr/local/share/doc/py39-MACS3 EXAMPLESDIR=/usr/local/share/examples/py39-MACS3 WWWDIR=/usr/local/www/py39-MACS3 ETCDIR=/usr/local/etc/py39-MACS3 --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py39-MACS3-3.0.1 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.21.2.pkg [140i386-quarterly-job-04] Installing pkg-1.21.2... [140i386-quarterly-job-04] Extracting pkg-1.21.2: .......... done ===> py39-MACS3-3.0.1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py39-MACS3-3.0.1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py39-MACS3-3.0.1 for building =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py39-MACS3-3.0.1 for building => SHA256 Checksum OK for macs3-project-MACS-v3.0.1_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License BSD3CLAUSE accepted by the user ===> Fetching all distfiles required by py39-MACS3-3.0.1 for building ===> Extracting for py39-MACS3-3.0.1 => SHA256 Checksum OK for macs3-project-MACS-v3.0.1_GH0.tar.gz. =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py39-MACS3-3.0.1 ===> Applying FreeBSD patches for py39-MACS3-3.0.1 from /usr/ports/biology/py-macs3/files =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py39-MACS3-3.0.1 depends on package: py39-wheel>0 - not found ===> Installing existing package /packages/All/py39-wheel-0.43.0.pkg [140i386-quarterly-job-04] Installing py39-wheel-0.43.0... [140i386-quarterly-job-04] `-- Installing python39-3.9.18_2... [140i386-quarterly-job-04] | `-- Installing gettext-runtime-0.22.5... [140i386-quarterly-job-04] | | `-- Installing indexinfo-0.3.1... [140i386-quarterly-job-04] | | `-- Extracting indexinfo-0.3.1: .... done [140i386-quarterly-job-04] | `-- Extracting gettext-runtime-0.22.5: .......... done [140i386-quarterly-job-04] | `-- Installing libffi-3.4.4_1... [140i386-quarterly-job-04] | `-- Extracting libffi-3.4.4_1: .......... done [140i386-quarterly-job-04] | `-- Installing mpdecimal-4.0.0... [140i386-quarterly-job-04] | `-- Extracting mpdecimal-4.0.0: .......... done [140i386-quarterly-job-04] | `-- Installing readline-8.2.10... [140i386-quarterly-job-04] | `-- Extracting readline-8.2.10: .......... done [140i386-quarterly-job-04] `-- Extracting python39-3.9.18_2: .......... done [140i386-quarterly-job-04] Extracting py39-wheel-0.43.0: .......... done ===== Message from python39-3.9.18_2: -- Note that some standard Python modules are provided as separate ports [140i386-quarterly-job-04] `-- Extracting py39-pyproject_hooks-1.0.0_2: .......... done [140i386-quarterly-job-04] Extracting py39-build-1.2.1: .......... done ===> py39-MACS3-3.0.1 depends on package: py39-build>=0 - found ===> Returning to build of py39-MACS3-3.0.1 ===> py39-MACS3-3.0.1 depends on package: py39-installer>=0 - not found ===> Installing existing package /packages/All/py39-installer-0.7.0.pkg [140i386-quarterly-job-04] Installing py39-installer-0.7.0... [140i386-quarterly-job-04] Extracting py39-installer-0.7.0: .......... done ===> py39-MACS3-3.0.1 depends on package: py39-installer>=0 - found ===> Returning to build of py39-MACS3-3.0.1 =========================================================================== =================================================== ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py39-MACS3-3.0.1 =========================================================================== =================================================== ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py39-MACS3-3.0.1 * Getting build dependencies for wheel... Compiling MACS3/Signal/HMMR_EM.pyx because it changed. Compiling MACS3/Signal/HMMR_Signal_Processing.pyx because it changed. Compiling MACS3/Signal/HMMR_HMM.pyx because it changed. Compiling MACS3/Signal/Prob.pyx because it changed. Compiling MACS3/Signal/Region.pyx because it changed. Compiling MACS3/Signal/Pileup.pyx because it changed. Compiling MACS3/Signal/PileupV2.pyx because it changed. Compiling MACS3/Signal/PeakModel.pyx because it changed. Compiling MACS3/Signal/PeakDetect.pyx because it changed. Compiling MACS3/Signal/SignalProcessing.pyx because it changed. Compiling MACS3/Signal/FixWidthTrack.pyx because it changed. Compiling MACS3/Signal/PairedEndTrack.pyx because it changed. Compiling MACS3/Signal/BedGraph.pyx because it changed. Compiling MACS3/Signal/ScoreTrack.pyx because it changed. Compiling MACS3/Signal/CallPeakUnit.pyx because it changed. Compiling MACS3/Signal/VariantStat.pyx because it changed. Compiling MACS3/Signal/ReadAlignment.pyx because it changed. Compiling MACS3/Signal/RACollection.pyx because it changed. Compiling MACS3/Signal/UnitigRACollection.pyx because it changed. Compiling MACS3/Signal/PosReadsInfo.pyx because it changed. Compiling MACS3/Signal/PeakVariants.pyx because it changed. Compiling MACS3/IO/Parser.pyx because it changed. Compiling MACS3/IO/PeakIO.pyx because it changed. Compiling MACS3/IO/BedGraphIO.pyx because it changed. Compiling MACS3/IO/BAM.pyx because it changed. [ 1/25] Cythonizing MACS3/IO/BAM.pyx [ 2/25] Cythonizing MACS3/IO/BedGraphIO.pyx [ 3/25] Cythonizing MACS3/IO/Parser.pyx [ 4/25] Cythonizing MACS3/IO/PeakIO.pyx [ 5/25] Cythonizing MACS3/Signal/BedGraph.pyx [ 6/25] Cythonizing MACS3/Signal/CallPeakUnit.pyx [ 7/25] Cythonizing MACS3/Signal/FixWidthTrack.pyx [ 8/25] Cythonizing MACS3/Signal/HMMR_EM.pyx [ 9/25] Cythonizing MACS3/Signal/HMMR_HMM.pyx [10/25] Cythonizing MACS3/Signal/HMMR_Signal_Processing.pyx [11/25] Cythonizing MACS3/Signal/PairedEndTrack.pyx [12/25] Cythonizing MACS3/Signal/PeakDetect.pyx [13/25] Cythonizing MACS3/Signal/PeakModel.pyx [14/25] Cythonizing MACS3/Signal/PeakVariants.pyx [15/25] Cythonizing MACS3/Signal/Pileup.pyx [16/25] Cythonizing MACS3/Signal/PileupV2.pyx [17/25] Cythonizing MACS3/Signal/PosReadsInfo.pyx [18/25] Cythonizing MACS3/Signal/Prob.pyx [19/25] Cythonizing MACS3/Signal/RACollection.pyx [20/25] Cythonizing MACS3/Signal/ReadAlignment.pyx [21/25] Cythonizing MACS3/Signal/Region.pyx [22/25] Cythonizing MACS3/Signal/ScoreTrack.pyx [23/25] Cythonizing MACS3/Signal/SignalProcessing.pyx [24/25] Cythonizing MACS3/Signal/UnitigRACollection.pyx [25/25] Cythonizing MACS3/Signal/VariantStat.pyx running egg_info creating MACS3.egg-info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt writing manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '*.h' found under directory 'MACS3' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' * Building wheel... running bdist_wheel running build running build_py creating build creating build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39 creating build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3 copying MACS3/__init__.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3 creating build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/IO creating build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal creating build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Commands creating build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension creating build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39 creating build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3 creating build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/HMMR_EM.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_EM.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_EM.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_EM.cpython-39.so building 'MACS3.Signal.HMMR_Signal_Processing' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_Signal_Processing.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_Signal_Processing.cpython-39.so building 'MACS3.Signal.HMMR_HMM' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/HMMR_HMM.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_HMM.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_HMM.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/HMMR_HMM.cpython-39.so building 'MACS3.Signal.Prob' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/Prob.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Prob.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Prob.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Prob.cpython-39.so building 'MACS3.Signal.Region' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/Region.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Region.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Region.o -L/usr/local/lib -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Region.cpython-39.so building 'MACS3.Signal.Pileup' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I./MACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/Pileup.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Pileup.o -w -Ofast -g0 cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I./MACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/cPosValCalculation.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/cPosValCalculation.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Pileup.o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/cPosValCalculation.o -L/usr/local/lib -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/Pileup.cpython-39.so building 'MACS3.Signal.PileupV2' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/PileupV2.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PileupV2.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PileupV2.o -L/usr/local/lib -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PileupV2.cpython-39.so building 'MACS3.Signal.PeakModel' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/PeakModel.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PeakModel.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PeakModel.o -L/usr/local/lib -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PeakModel.cpython-39.so building 'MACS3.Signal.PeakDetect' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/include/python3.9 -c MACS3/Signal/PeakDetect.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PeakDetect.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PeakDetect.o -L/usr/local/lib -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PeakDetect.cpython-39.so building 'MACS3.Signal.SignalProcessing' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/SignalProcessing.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/SignalProcessing.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/SignalProcessing.o -L/usr/local/lib -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/SignalProcessing.cpython-39.so building 'MACS3.Signal.FixWidthTrack' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/FixWidthTrack.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/FixWidthTrack.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/FixWidthTrack.o -L/usr/local/lib -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/FixWidthTrack.cpython-39.so building 'MACS3.Signal.PairedEndTrack' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/PairedEndTrack.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PairedEndTrack.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PairedEndTrack.o -L/usr/local/lib -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/PairedEndTrack.cpython-39.so building 'MACS3.Signal.BedGraph' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/BedGraph.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/BedGraph.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/BedGraph.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/BedGraph.cpython-39.so building 'MACS3.Signal.ScoreTrack' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/ScoreTrack.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/ScoreTrack.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/ScoreTrack.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/ScoreTrack.cpython-39.so building 'MACS3.Signal.CallPeakUnit' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/CallPeakUnit.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/CallPeakUnit.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/CallPeakUnit.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/CallPeakUnit.cpython-39.so building 'MACS3.Signal.VariantStat' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/VariantStat.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/VariantStat.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/VariantStat.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/VariantStat.cpython-39.so building 'MACS3.Signal.ReadAlignment' extension cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/usr/local/include/python3.9 -c MACS3/Signal/ReadAlignment.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/ReadAlignment.o -w -Ofast -g0 cc -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/ReadAlignment.o -L/usr/local/lib -lm -o build/lib.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/ReadAlignment.cpython-39.so building 'MACS3.Signal.RACollection' extension creating build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/fermi-lite cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -IMACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/local/include/python3.9 -c MACS3/Signal/RACollection.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/RACollection.o -w -Ofast -g0 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -IMACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/local/include/python3.9 -c MACS3/Signal/swalign.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/Signal/swalign.o -w -Ofast -g0 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -IMACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/local/include/python3.9 -c MACS3/fermi-lite/bfc.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/fermi-lite/bfc.o -w -Ofast -g0 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -IMACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/local/include/python3.9 -c MACS3/fermi-lite/bseq.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/fermi-lite/bseq.o -w -Ofast -g0 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -IMACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/local/include/python3.9 -c MACS3/fermi-lite/bubble.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/fermi-lite/bubble.o -w -Ofast -g0 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -IMACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/local/include/python3.9 -c MACS3/fermi-lite/htab.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/fermi-lite/htab.o -w -Ofast -g0 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -fPIC -IMACS3/Signal -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/local/include/python3.9 -c MACS3/fermi-lite/ksw.c -o build/temp.freebsd-14.0-RELEASE-p6-i386-cpython-39/MACS3/fermi-lite/ksw.o -w -Ofast -g0 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP In file included from MACS3/fermi-lite/ksw.c:31: In file included from /usr/local/include/simde/x86/sse2.h:35: In file included from /usr/local/include/simde/x86/sse.h:34: /usr/local/include/simde/x86/../simde-f16.h:96:11: error: _Float16 is not supported on this target typedef _Float16 simde_float16; ^ 1 error generated. error: command '/usr/bin/cc' failed with exit code 1 ERROR Backend subprocess exited when trying to invoke build_wheel *** Error code 1 Stop. make: stopped in /usr/ports/biology/py-macs3