[package - 132i386-quarterly][math/libRmath] Failed for libRmath-4.3.1 in build
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Date: Wed, 10 Apr 2024 00:45:45 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: ports@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy13/data/132i386-quarterly/c5cd8211433f/logs/libRmath-4.3.1.log
Build URL: https://pkg-status.freebsd.org/beefy13/build.html?mastername=132i386-quarterly&build=c5cd8211433f
Log:
=>> Building math/libRmath
build started at Wed Apr 10 00:43:21 UTC 2024
port directory: /usr/ports/math/libRmath
package name: libRmath-4.3.1
building for: FreeBSD 132i386-quarterly-job-12 13.2-RELEASE-p11 FreeBSD 13.2-RELEASE-p11 i386
maintained by: ports@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 1257 Apr 9 01:02 /usr/ports/math/libRmath/Makefile
Ports top last git commit: c5cd82114
Ports top unclean checkout: no
Port dir last git commit: c5cd82114
Port dir unclean checkout: no
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Jail OSVERSION: 1302001
Job Id: 12
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#### ####
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=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> NOTICE:
The libRmath port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> libRmath-4.3.1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.21.0.pkg
[132i386-quarterly-job-12] Installing pkg-1.21.0...
[132i386-quarterly-job-12] Extracting pkg-1.21.0: .......... done
===> libRmath-4.3.1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of libRmath-4.3.1
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> NOTICE:
The libRmath port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by libRmath-4.3.1 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> NOTICE:
The libRmath port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by libRmath-4.3.1 for building
=> SHA256 Checksum OK for R-4.3.1.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
<snip>
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checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for _LARGEFILE_SOURCE value needed for large files... no
checking whether KERN_USRSTACK sysctl is supported... yes
checking for lpr... lpr
checking for paperconf... false
checking for Fortran flag to compile .f90 files... none
checking for Fortran flag to compile .f95 files... none
checking for gfortran13 option to support OpenMP... (cached) -fopenmp
checking for recommended packages... yes
checking whether NLS is requested... no
checking whether OpenMP SIMD reduction is supported... yes
using as R_SHELL for scripts ... /bin/sh
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
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config.status: creating etc/ldpaths
config.status: creating m4/Makefile
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config.status: creating src/extra/intl/Makefile
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config.status: creating src/extra/tzone/Makefile
config.status: creating src/extra/xdr/Makefile
config.status: creating src/include/Makefile
config.status: creating src/include/Rmath.h0
config.status: creating src/include/R_ext/Makefile
config.status: creating src/library/Recommended/Makefile
config.status: creating src/library/Makefile
config.status: creating src/library/base/DESCRIPTION
config.status: creating src/library/base/Makefile
config.status: creating src/library/compiler/DESCRIPTION
config.status: creating src/library/compiler/Makefile
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config.status: creating src/library/datasets/Makefile
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config.status: creating src/library/graphics/Makefile
config.status: creating src/library/graphics/src/Makefile
config.status: creating src/library/grDevices/DESCRIPTION
config.status: creating src/library/grDevices/Makefile
config.status: creating src/library/grDevices/src/Makefile
config.status: creating src/library/grDevices/src/cairo/Makefile
config.status: creating src/library/grid/DESCRIPTION
config.status: creating src/library/grid/Makefile
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config.status: creating src/library/methods/DESCRIPTION
config.status: creating src/library/methods/Makefile
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config.status: creating src/library/parallel/DESCRIPTION
config.status: creating src/library/parallel/Makefile
config.status: creating src/library/parallel/src/Makefile
config.status: creating src/library/profile/Makefile
config.status: creating src/library/stats/DESCRIPTION
config.status: creating src/library/stats/Makefile
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config.status: creating src/library/stats4/DESCRIPTION
config.status: creating src/library/stats4/Makefile
config.status: creating src/library/splines/DESCRIPTION
config.status: creating src/library/splines/Makefile
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config.status: creating src/library/tcltk/DESCRIPTION
config.status: creating src/library/tcltk/Makefile
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config.status: creating src/library/tools/Makefile
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config.status: creating src/library/translations/DESCRIPTION
config.status: creating src/library/translations/Makefile
config.status: creating src/library/utils/DESCRIPTION
config.status: creating src/library/utils/Makefile
config.status: creating src/library/utils/src/Makefile
config.status: creating src/main/Makefile
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config.status: creating src/modules/X11/Makefile
config.status: creating src/modules/internet/Makefile
config.status: creating src/modules/lapack/Makefile
config.status: creating src/nmath/Makefile
config.status: creating src/nmath/standalone/Makefile
config.status: creating src/scripts/Makefile
config.status: creating src/scripts/R.sh
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config.status: creating src/scripts/javareconf
config.status: creating src/scripts/mkinstalldirs
config.status: creating src/scripts/pager
config.status: creating src/scripts/rtags
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config.status: creating tests/Examples/Makefile
config.status: creating tools/Makefile
config.status: creating src/include/config.h
config.status: executing libtool commands
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R is now configured for i386-portbld-freebsd13.2
Source directory: .
Installation directory: /usr/local
C compiler: cc -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing
Fortran fixed-form compiler: gfortran13 -O -Wl,-rpath=/usr/local/lib/gcc13
Default C++ compiler: c++ -std=gnu++17 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include
C++11 compiler: c++ -std=gnu++11 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include
C++14 compiler: c++ -std=gnu++14 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include
C++17 compiler: c++ -std=gnu++17 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include
C++20 compiler: c++ -std=gnu++20 -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include
C++23 compiler: c++ -std=gnu++2b -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include
Fortran free-form compiler: gfortran13 -Wl,-rpath=/usr/local/lib/gcc13
Obj-C compiler: cc -g -O2 -fobjc-exceptions
Interfaces supported:
External libraries: pcre2, curl
Additional capabilities:
Options enabled: shared BLAS, R profiling
Capabilities skipped: PNG, JPEG, TIFF, NLS, cairo, ICU
Options not enabled: memory profiling
Recommended packages: yes
configure: WARNING: you cannot build info or HTML versions of the R manuals
configure: WARNING: you cannot build PDF versions of the R manuals
configure: WARNING: you cannot build PDF versions of vignettes and help pages
configure: WARNING: I could not determine a browser
configure: WARNING: I could not determine a PDF viewer
===========================================================================
=======================<phase: build >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Building for libRmath-4.3.1
--- ../../include/Rconfig.h ---
--- Copy ---
--- inc ---
--- ../../include/Rconfig.h ---
(cd ../../include; /usr/bin/make Rconfig.h)
--- Rconfig.h ---
Copying source files
--- inc ---
(cd ../../include; /usr/bin/make Rmath.h)
--- Makedeps ---
--- mlutils.d ---
--- d1mach.d ---
making mlutils.d from mlutils.c
--- mlutils.d ---
In file included from mlutils.c:24:
./../nmath.h:44:10: fatal error: 'Rmath.h' file not found
#include <Rmath.h>
^~~~~~~~~
1 error generated.
*** [mlutils.d] Error code 1
make[1]: stopped in /wrkdirs/usr/ports/math/libRmath/work/R-4.3.1/src/nmath/standalone
making d1mach.d from d1mach.c
--- inc ---
*** [inc] Error code 6
make: stopped in /wrkdirs/usr/ports/math/libRmath/work/R-4.3.1/src/nmath/standalone
--- Makedeps ---
--- d1mach.d ---
In file included from d1mach.c:30:
./../nmath.h:44:10: fatal error: 'Rmath.h' file not found
#include <Rmath.h>
^~~~~~~~~
1 error generated.
*** [d1mach.d] Error code 1
make[1]: stopped in /wrkdirs/usr/ports/math/libRmath/work/R-4.3.1/src/nmath/standalone
2 errors
make[1]: stopped in /wrkdirs/usr/ports/math/libRmath/work/R-4.3.1/src/nmath/standalone
*** [Makedeps] Error code 2
make: stopped in /wrkdirs/usr/ports/math/libRmath/work/R-4.3.1/src/nmath/standalone
2 errors
make: stopped in /wrkdirs/usr/ports/math/libRmath/work/R-4.3.1/src/nmath/standalone
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/math/libRmath