[package - 124amd64-quarterly][graphics/py-mayavi] Failed for py39-mayavi-4.8.1_6 in build
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Date: Fri, 10 Nov 2023 06:10:56 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy2/data/124amd64-quarterly/d6183abd1b32/logs/py39-mayavi-4.8.1_6.log
Build URL: https://pkg-status.freebsd.org/beefy2/build.html?mastername=124amd64-quarterly&build=d6183abd1b32
Log:
=>> Building graphics/py-mayavi
build started at Fri Nov 10 06:07:57 UTC 2023
port directory: /usr/ports/graphics/py-mayavi
package name: py39-mayavi-4.8.1_6
building for: FreeBSD 124amd64-quarterly-job-01 12.4-RELEASE-p7 FreeBSD 12.4-RELEASE-p7 amd64
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 2235 Oct 3 01:01 /usr/ports/graphics/py-mayavi/Makefile
Ports top last git commit: d6183abd1
Ports top unclean checkout: no
Port dir last git commit: 2195304f9
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.3.0-1251-ge8a0e12e
Host OSVERSION: 1500000
Jail OSVERSION: 1204000
Job Id: 01
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POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=py39
MAKE_ARGS= FLAVOR=py39
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/.cache HOME=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh WX_CONFIG=/usr/local/bin/wxgtk3u-3.2-config
--End CONFIGURE_ENV--
--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/.cache HOME=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES WX_CONFIG=/usr/local/bin/wxgtk3u-3.2-config LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing "
MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
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--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd12 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=12.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/mayavi" EXAMPLESDIR="share/examples/mayavi" DATADIR="share/mayavi" WWWDIR="www/mayavi" ETCDIR="etc/mayavi"
--End PLIST_SUB--
--SUB_LIST--
PYTHON_INCLUDEDIR=/usr/local/include/python3.9 PYTHON_LIBDIR=/usr/local/lib/python3.9 PYTHON_PLATFORM=freebsd12 PYTHON_SITELIBDIR=/usr/local/lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/mayavi DOCSDIR=/usr/local/share/doc/mayavi EXAMPLESDIR=/usr/local/share/examples/mayavi WWWDIR=/usr/local/www/mayavi ETCDIR=/usr/local/etc/mayavi
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 33554432
stack size (kbytes, -s) 524288
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE LGPL21 LGPL20 EPL LGPL3 BSD2CLAUSE APACHE11 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> py39-mayavi-4.8.1_6 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.20.8.pkg
[124amd64-quarterly-job-01] Installing pkg-1.20.8...
[124amd64-quarterly-job-01] Extracting pkg-1.20.8: .......... done
===> py39-mayavi-4.8.1_6 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of py39-mayavi-4.8.1_6
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE LGPL21 LGPL20 EPL LGPL3 BSD2CLAUSE APACHE11 accepted by the user
===> Fetching all distfiles required by py39-mayavi-4.8.1_6 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE LGPL21 LGPL20 EPL LGPL3 BSD2CLAUSE APACHE11 accepted by the user
===> Fetching all distfiles required by py39-mayavi-4.8.1_6 for building
=> SHA256 Checksum OK for mayavi-4.8.1.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE LGPL21 LGPL20 EPL LGPL3 BSD2CLAUSE APACHE11 accepted by the user
===> Fetching all distfiles required by py39-mayavi-4.8.1_6 for building
===> Extracting for py39-mayavi-4.8.1_6
=> SHA256 Checksum OK for mayavi-4.8.1.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for py39-mayavi-4.8.1_6
===> Applying FreeBSD patches for py39-mayavi-4.8.1_6 from /usr/ports/graphics/py-mayavi/files
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> py39-mayavi-4.8.1_6 depends on package: py39-numpy>=1.16,1<1.26,1 - not found
===> Installing existing package /packages/All/py39-numpy-1.25.0_1,1.pkg
[124amd64-quarterly-job-01] Installing py39-numpy-1.25.0_1,1...
[124amd64-quarterly-job-01] `-- Installing gcc12-12.2.0_6...
[124amd64-quarterly-job-01] | `-- Installing binutils-2.40_4,1...
[124amd64-quarterly-job-01] | | `-- Installing gettext-runtime-0.22_1...
[124amd64-quarterly-job-01] | | `-- Installing indexinfo-0.3.1...
[124amd64-quarterly-job-01] | | `-- Extracting indexinfo-0.3.1: .... done
[124amd64-quarterly-job-01] | | `-- Extracting gettext-runtime-0.22_1: .......... done
[124amd64-quarterly-job-01] | | `-- Installing zstd-1.5.5...
[124amd64-quarterly-job-01] | | `-- Installing liblz4-1.9.4,1...
[124amd64-quarterly-job-01] | | `-- Extracting liblz4-1.9.4,1: .......... done
[124amd64-quarterly-job-01] | | `-- Extracting zstd-1.5.5: .......... done
[124amd64-quarterly-job-01] | `-- Extracting binutils-2.40_4,1: .......... done
[124amd64-quarterly-job-01] | `-- Installing gmp-6.3.0...
[124amd64-quarterly-job-01] | `-- Extracting gmp-6.3.0: .......... done
[124amd64-quarterly-job-01] | `-- Installing mpc-1.3.1_1...
[124amd64-quarterly-job-01] | | `-- Installing mpfr-4.2.1,1...
[124amd64-quarterly-job-01] | | `-- Extracting mpfr-4.2.1,1: .......... done
[124amd64-quarterly-job-01] | `-- Extracting mpc-1.3.1_1: ......... done
[124amd64-quarterly-job-01] `-- Extracting gcc12-12.2.0_6: .......... done
[124amd64-quarterly-job-01] `-- Installing openblas-0.3.20,2...
[124amd64-quarterly-job-01] `-- Extracting openblas-0.3.20,2: .......... done
[124amd64-quarterly-job-01] `-- Installing py39-setuptools-63.1.0_1...
[124amd64-quarterly-job-01] | `-- Installing python39-3.9.18...
[124amd64-quarterly-job-01] | | `-- Installing libffi-3.4.4...
[124amd64-quarterly-job-01] | | `-- Extracting libffi-3.4.4: .......... done
[124amd64-quarterly-job-01] | | `-- Installing mpdecimal-2.5.1...
[124amd64-quarterly-job-01] | | `-- Extracting mpdecimal-2.5.1: .......... done
<snip>
[124amd64-quarterly-job-01] | `-- Installing qt5-sql-5.15.10p156...
[124amd64-quarterly-job-01] | `-- Extracting qt5-sql-5.15.10p156: .......... done
[124amd64-quarterly-job-01] | `-- Installing qt5-widgets-5.15.10p156...
[124amd64-quarterly-job-01] | `-- Extracting qt5-widgets-5.15.10p156: .......... done
[124amd64-quarterly-job-01] `-- Extracting qt5-declarative-5.15.10p31: .......... done
[124amd64-quarterly-job-01] `-- Installing qt5-opengl-5.15.10p156...
[124amd64-quarterly-job-01] `-- Extracting qt5-opengl-5.15.10p156: .......... done
[124amd64-quarterly-job-01] `-- Installing qt5-qmake-5.15.10p156...
[124amd64-quarterly-job-01] `-- Extracting qt5-qmake-5.15.10p156: .......... done
[124amd64-quarterly-job-01] `-- Installing qt5-uiplugin-5.15.10p3...
[124amd64-quarterly-job-01] `-- Extracting qt5-uiplugin-5.15.10p3: .......... done
[124amd64-quarterly-job-01] `-- Installing qt5-x11extras-5.15.10p0...
[124amd64-quarterly-job-01] `-- Extracting qt5-x11extras-5.15.10p0: .......... done
[124amd64-quarterly-job-01] `-- Installing tiff-4.4.0_2...
[124amd64-quarterly-job-01] | `-- Installing jbigkit-2.1_1...
[124amd64-quarterly-job-01] | `-- Extracting jbigkit-2.1_1: .......... done
[124amd64-quarterly-job-01] | `-- Installing libdeflate-1.19...
[124amd64-quarterly-job-01] | `-- Extracting libdeflate-1.19: .......... done
[124amd64-quarterly-job-01] `-- Extracting tiff-4.4.0_2: .......... done
[124amd64-quarterly-job-01] Extracting vtk9-9.2.6_2: .......... done
==> Running trigger: fontconfig.ucl
Running fc-cache to build fontconfig cache...
==> Running trigger: gio-modules.ucl
Generating GIO modules cache
==> Running trigger: glib-schemas.ucl
Compiling glib schemas
No schema files found: doing nothing.
=====
Message from freetype2-2.13.1:
--
The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as
the default, emulating a modern version of ClearType. This change inevitably
leads to different rendering results, and you might change port's options to
adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment
variable).
The environment variable "FREETYPE_PROPERTIES" can be used to control the
driver properties. Example:
FREETYPE_PROPERTIES=truetype:interpreter-version=35 \
cff:no-stem-darkening=1 \
autofitter:warping=1
This allows to select, say, the subpixel hinting mode at runtime for a given
application.
If LONG_PCF_NAMES port's option was enabled, the PCF family names may include
the foundry and information whether they contain wide characters. For example,
"Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at
run time with using pcf:no-long-family-names property, if needed. Example:
FREETYPE_PROPERTIES=pcf:no-long-family-names=1
How to recreate fontconfig cache with using such environment variable,
if needed:
# env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv
The controllable properties are listed in the section "Controlling FreeType
Modules" in the reference's table of contents
(/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed).
=====
Message from slurm-wlm-20.02.7_3:
--
===> NOTICE:
The slurm-wlm port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
=====
Message from openmpi-4.1.5_1:
--
===> NOTICE:
The openmpi port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://docs.freebsd.org/en/articles/contributing/#ports-contributing
=====
Message from wayland-1.22.0:
--
Wayland requires XDG_RUNTIME_DIR to be defined to a path that will
contain "wayland-%d" unix(4) sockets. This is usually handled by
consolekit2 (via ck-launch-session) or pam_xdg (via login).
=====
Message from libxkbcommon-1.5.0:
--
If arrow keys don't work under X11 switch to legacy rules e.g.,
For sh/bash/ksh/zsh run and (optionally) add into ~/.profile:
export XKB_DEFAULT_RULES=xorg
For csh/tcsh run and (optionally) add into ~/.login:
setenv XKB_DEFAULT_RULES xorg
=====
Message from dejavu-2.37_3:
--
Make sure that the freetype module is loaded. If it is not, add the following
line to the "Modules" section of your X Windows configuration file:
Load "freetype"
Add the following line to the "Files" section of X Windows configuration file:
FontPath "/usr/local/share/fonts/dejavu/"
Note: your X Windows configuration file is typically /etc/X11/XF86Config
if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
=====
Message from qt5-sql-5.15.10p156:
--
To enable Qt database support, install the database plugin ports. The
following plugin ports are available:
- databases/qt5-sqldrivers-ibase InterBase/Firebird
- databases/qt5-sqldrivers-mysql MySQL
- databases/qt5-sqldrivers-odbc Open Database Connectivity
- databases/qt5-sqldrivers-pgsql PostgreSQL
- databases/qt5-sqldrivers-sqlite2 SQLite 2
- databases/qt5-sqldrivers-sqlite3 SQLite 3
- databases/qt5-sqldrivers-tds FreeTDS
===> py39-mayavi-4.8.1_6 depends on shared library: libvtkCommonCore-9.2.so - found (/usr/local/lib/libvtkCommonCore-9.2.so)
===> Returning to build of py39-mayavi-4.8.1_6
===========================================================================
=======================<phase: configure >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Configuring for py39-mayavi-4.8.1_6
setup.py:13: DeprecationWarning:
`numpy.distutils` is deprecated since NumPy 1.23.0, as a result
of the deprecation of `distutils` itself. It will be removed for
Python >= 3.12. For older Python versions it will remain present.
It is recommended to use `setuptools < 60.0` for those Python versions.
For more details, see:
https://numpy.org/devdocs/reference/distutils_status_migration.html
from numpy.distutils.command import build, install_data, build_src
running config
===========================================================================
=======================<phase: build >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Building for py39-mayavi-4.8.1_6
setup.py:13: DeprecationWarning:
`numpy.distutils` is deprecated since NumPy 1.23.0, as a result
of the deprecation of `distutils` itself. It will be removed for
Python >= 3.12. For older Python versions it will remain present.
It is recommended to use `setuptools < 60.0` for those Python versions.
For more details, see:
https://numpy.org/devdocs/reference/distutils_status_migration.html
from numpy.distutils.command import build, install_data, build_src
running build
Building tvtk_classes.zip
----------------------------------------------------------------------
Deleting possibly old TVTK classes
Building TVTK classes... Fatal Python error: Segmentation fault
Current thread 0x00002e109c60a000 (most recent call first):
File "/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/mayavi-4.8.1/tvtk/vtk_parser.py", line 711 in _find_get_set_methods
File "/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/mayavi-4.8.1/tvtk/vtk_parser.py", line 491 in _organize_methods
File "/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/mayavi-4.8.1/tvtk/vtk_parser.py", line 157 in parse
File "/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/mayavi-4.8.1/tvtk/wrapper_gen.py", line 341 in _gen_methods
File "/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/mayavi-4.8.1/tvtk/wrapper_gen.py", line 242 in generate_code
File "/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/mayavi-4.8.1/tvtk/code_gen.py", line 235 in _write_wrapper_class
File "/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/mayavi-4.8.1/tvtk/code_gen.py", line 142 in generate_code
File "/wrkdirs/usr/ports/graphics/py-mayavi/work-py39/mayavi-4.8.1/tvtk/setup.py", line 98 in gen_tvtk_classes_zip
File "setup.py", line 273 in build_tvtk_classes_zip
File "setup.py", line 287 in run
File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 987 in run_command
File "/usr/local/lib/python3.9/site-packages/setuptools/dist.py", line 1217 in run_command
File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/dist.py", line 968 in run_commands
File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 193 in run_commands
File "/usr/local/lib/python3.9/site-packages/setuptools/_distutils/core.py", line 177 in setup
File "/usr/local/lib/python3.9/site-packages/setuptools/__init__.py", line 87 in setup
File "/usr/local/lib/python3.9/site-packages/numpy/distutils/core.py", line 169 in setup
File "setup.py", line 432 in <module>
File "<string>", line 1 in <module>
*** Signal 11
Stop.
make: stopped in /usr/ports/graphics/py-mayavi